KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:06:09 2014 Check: 00 .. Name: bmy_01669T0/1-320 Len: 337 Check: 8284 Weight: 1.00 Name: ENSP00000309570/1-302 Len: 337 Check: 1813 Weight: 1.00 Name: ENSBTAP00000053544/1-302 Len: 337 Check: 2678 Weight: 1.00 Name: BACU020211/1-286 Len: 337 Check: 441 Weight: 1.00 Name: ENSTTRP00000013697/1-302 Len: 337 Check: 2978 Weight: 1.00 // 1 50 bmy_01669T0/1-320 MESEMSNYC- ---------N GTHAPC---- ---HTTCLEL ERYLQTEPRR ENSP00000309570/1-302 -MDVLASYSI FQELQLVHDT GYFSALPSLE ETWQQTCLEL ERYLQTEPRR ENSBTAP00000053544/1-302 -MDVLASYSI FQELQLVHDT GYFSALPSLE ETWQQTCLEL ERYLQTEPRR BACU020211/1-286 -MDVLASYSI FQELQLVHDT GYFSALPSLE ETWQQTCLEL ERYLQTEPRR ENSTTRP00000013697/1-302 -MDVLASYSI FQELQLVHDT GYFSALPSLE ETWQQTCLEL ERYLQTEPRR 51 100 bmy_01669T0/1-320 ISETFGEDLD CFLRASPPPC IEESFRRLDP LLLPVEATIC EKSSAVDILL ENSP00000309570/1-302 ISETFGEDLD CFLHASPPPC IEESFRRLDP LLLPVEAAIC EKSSAVDILL ENSBTAP00000053544/1-302 ISETFGEDLD CFLRASPPPC IEESFRRLDP LLLPVEATIC EKSSAVDILL BACU020211/1-286 ISETFGEDLD CFLRASPPPC IEESFRRLDP LLLPVEATIC EKSSAVDILL ENSTTRP00000013697/1-302 ISETFGEDLD CFLRASPPPC IEESFRRLDP LLLPVEATIC EKSSAVDILL 101 150 bmy_01669T0/1-320 SRDKLLSETC LSLQPTSSSL DSYTAVNQAQ LNAVTSLTPP SSPELSRHLV ENSP00000309570/1-302 SRDKLLSETC LSLQPASSSL DSYTAVNQAQ LNAVTSLTPP SSPELSRHLV ENSBTAP00000053544/1-302 SRDKLLSETC LSLQPTSSSL DSYTAVNQAQ LNAVTSLTPP SSPELSRHLV BACU020211/1-286 SRDKLLSETC LSLQPTSSSL DSYTAVNQAQ LNAVTSLTPP SSPELSRHLV ENSTTRP00000013697/1-302 SRDKLLSETC LSLQPTSSSL DSYTAVNQAQ LNAVTSLTPP SSPELSRHLV 151 200 bmy_01669T0/1-320 KTSQTLSAVD GTVTLKLVAK KAALSSVKVG GVATAAAAVA AAGTVKSGQS ENSP00000309570/1-302 KTSQTLSAVD GTVTLKLVAK KAALSSVKVG GVATAAAAVT AAGAVKSGQS ENSBTAP00000053544/1-302 KTSQTLSAVD GTVTLKLVAK KAALGSVKVG GVATAAAAVA AAGTVKSGHS BACU020211/1-286 KTSQTLSAVD GTVTLKLVAK KAALSSVKVG GVATAAAAVA AAGTVKSGQS ENSTTRP00000013697/1-302 KTSQTLSAVD GTVTLKLVAK KAALSSVKVG GVATAAAAVA AAGTVKSGQS 201 250 bmy_01669T0/1-320 DSEQGGVGAE ACPENKKRVH RCQFNGCRKV YTKSSHLKAH QRTHTGSGTS ENSP00000309570/1-302 DSDQGGLGAE ACPENKKRVH RCQFNGCRKV YTKSSHLKAH QRTHTG---- ENSBTAP00000053544/1-302 DSEQGGVGAE ACPENKKRVH RCQFNGCRKV YTKSSHLKAH QRTHTG---- BACU020211/1-286 DSEQGGVGAE ACPENKKRVH RCQFNGCRKV YTKSSHLKAH QRTHTG---- ENSTTRP00000013697/1-302 DSEQGGVGAE ACPENKKRVH RCQFNGCRKV YTKSSHLKAH QRTHTG---- 251 300 bmy_01669T0/1-320 WPHVVSSFSS FSLVVGRASL CSEKWHPCQL GGVERQVGLG GEAGDSLVTL ENSP00000309570/1-302 ---------- ---------- --EKPYKCSW EGCEWRFARS DELTRHYRKH ENSBTAP00000053544/1-302 ---------- ---------- --EKPYKCSW EGCEWRFARS DELTRHYRKH BACU020211/1-286 ---------- ---------- --EKPYKCSW EGCEWRFARS DELTRHYRKH ENSTTRP00000013697/1-302 ---------- ---------- --EKPYKCSW EGCEWRFARS DELTRHYRKH 301 350 bmy_01669T0/1-320 GSLGVLSTGH GFVTHWLGDT FRGNANHGVE SDTTEDA ENSP00000309570/1-302 TGAKPFKCNH CDRCFSRSDH LALHMKRHI- ------- ENSBTAP00000053544/1-302 TGAKPFKCNH CDRCFSRSDH LALHMKRHI- ------- BACU020211/1-286 TGAKPFKCNH CDR------- ---------- ------- ENSTTRP00000013697/1-302 TGAKPFKCNH CDRCFSRSDH LALHMKRHI- -------