KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:18 2014 Check: 00 .. Name: ENSTTRP00000002162/1-541 Len: 585 Check: 3914 Weight: 1.00 Name: bmy_09141T0/1-507 Len: 585 Check: 9570 Weight: 1.00 Name: BACU005576/1-585 Len: 585 Check: 874 Weight: 1.00 Name: ENSP00000296292/1-541 Len: 585 Check: 4360 Weight: 1.00 Name: ENSBTAP00000053575/1-541 Len: 585 Check: 6411 Weight: 1.00 // 1 50 ENSTTRP00000002162/1-541 ---------- ---------- ---------- ---------- ----MSPREV bmy_09141T0/1-507 ---------- ---------- ---------- ---------- ----MRPREV BACU005576/1-585 MESPLWVLWS LPILASHCVQ EALEYSPINS PGCQGSPEQP LPPGPGQRRV ENSP00000296292/1-541 ---------- ---------- ---------- ---------- ----MGSQEV ENSBTAP00000053575/1-541 ---------- ---------- ---------- ---------- ----MGSREV 51 100 ENSTTRP00000002162/1-541 LGQAARLASS GLLLQVLFRL ITFVLNAFIL RFLSKEIVGI VNVRLTLLYS bmy_09141T0/1-507 LGQAVRLASS GLLLQVLFRL ITFVLNAFIL RFLSKEIVGI VNVRLTLLYS BACU005576/1-585 RGDCGVLNSW ILHSEVLFRL ITFVLNAFIL RFLSKEIVGI VNVRLTLLYS ENSP00000296292/1-541 LGHAARLASS GLLLQVLFRL ITFVLNAFIL RFLSKEIVGV VNVRLTLLYS ENSBTAP00000053575/1-541 LGQAARLASS GLLLQVLFRL ITFVLNAFIL RFLSKEIVGI VNVRLTLLYS 101 150 ENSTTRP00000002162/1-541 TTIFLAREAF RRACLSGSTQ RDWSQTLNLL WLTVPLGVFW SVFLGWAWLQ bmy_09141T0/1-507 TTIFLAREAF RRACLSGSTQ RDWSQTLNLL WLTVPLGVFW SVFLGWAWLQ BACU005576/1-585 TTIFLAREAF RRACLSGSTR RDWSQTLNLL WLTVPLGVFW SVFLGWAWLQ ENSP00000296292/1-541 TTLFLAREAF RRACLSGGTQ RDWSQTLNLL WLTVPLGVFW SLFLGWIWLQ ENSBTAP00000053575/1-541 TTIFLAREAF RRACLSGAAQ RDWSQTLNLL WLTVPLGVFW SLFLGWVWLQ 151 200 ENSTTRP00000002162/1-541 LLAVPDPDVI PHYGTGVVLF GFSAVVELLG EPFWVLAQAH MFVKLKVIAE bmy_09141T0/1-507 LLAVPDPDVI PHYGTGVVLF GFSAVVELLG EPFWVLAQAH MFVKLK---- BACU005576/1-585 LLAVPDPDVI PHYGTGVVLF GFSAVVELLG EPFWVLAQAH MFVKLKVIAE ENSP00000296292/1-541 LLEVPDPNVV PHYATGVVLF GLSAVVELLG EPFWVLAQAH MFVKLKVIAE ENSBTAP00000053575/1-541 LLEVPDPHVV PHYGTGVVVF GFSAVVELLG EPFWVLAQAH MFVKLKVIAE 201 250 ENSTTRP00000002162/1-541 SLSVILKSVL TAFLVVCLPH WGLYIFSLAQ LFYTAVLVLC YVIYFTKLLG bmy_09141T0/1-507 ---------- ---------- ---------- LFYTAVLVLC YVIYFTKLLG BACU005576/1-585 SLSVILKSVL TAFLVLCLPH WGLYIFSLAQ LFYTAVLVLC YVIYFTKLLG ENSP00000296292/1-541 SLSVILKSVL TAFLVLWLPH WGLYIFSLAQ LFYTTVLVLC YVIYFTKLLG ENSBTAP00000053575/1-541 SLSVILKSVL TALLVLWLPH WGLYIFSLAQ LFYTTLLVLC YVIYFAKVLG 251 300 ENSTTRP00000002162/1-541 SPESAKQQVL PVSRMTDLLP TITRSRAFVN WEEAKLTWSF FKQSFLKQIL bmy_09141T0/1-507 SPESAKQQVL PVSRMTDMLP NITRSRAFVN WEEAKLTWSF FKQSFLKQIL BACU005576/1-585 SPESAKQQVL PVSRMTDMLP NITRSRAFVN WEEAKLTWSF FKQSFLKQIL ENSP00000296292/1-541 SPESTKLQTL PVSRITDLLP NITRNGAFIN WKEAKLTWSF FKQSFLKQIL ENSBTAP00000053575/1-541 SPESAKQQAL PVSRMTDLLP SMTRSRAFVN WEEAKLTWSF FKQSFLKQIL 301 350 ENSTTRP00000002162/1-541 TEGERYVMTF LNVLNFGDQG VYDIVNNLGS LVARLIFQPI EESFYIFFAK bmy_09141T0/1-507 TEGERYVMTF LNVLNFGDQG VYDIVNNLGS LVARLIFQPI EESFYIFFAK BACU005576/1-585 TEGERYVMTF LNVLNFGDQG MYDIVNNLGS LVARLIFQPI EESFYIFFAK ENSP00000296292/1-541 TEGERYVMTF LNVLNFGDQG VYDIVNNLGS LVARLIFQPI EESFYIFFAK ENSBTAP00000053575/1-541 TEGERYVMTF LNVLNFGDQG VYDIVNNLGS LVARLLFQPI EESFYIFFAK 351 400 ENSTTRP00000002162/1-541 VLEREKDATL QKQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09141T0/1-507 VLEREKDAIL QKEEDVAVAA AVLESLLKLA LLTGLTISVF GFAYSQLALD BACU005576/1-585 VLEREKDATL QKEEDVAVAA AVLESLLKLA LLTGLTISVF GFAYSQLALD ENSP00000296292/1-541 VLERGKDATL QKQEDVAVAA AVLESLLKLA LLAGLTITVF GFAYSQLALD ENSBTAP00000053575/1-541 VLEREKDATL QKQEDVAVAA VVLESLLKLA LLTGLTITVF GFAYSQLVLD 401 450 ENSTTRP00000002162/1-541 XXXXXXXXXX XXPVLLRAYC LYVLLLAING VTECFTFAAM SKEEVDRYNF bmy_09141T0/1-507 IYGGAMLSSG SGPVLLRAYC LYVLLLAING VTECFTFAAM SKEEVDRYNF BACU005576/1-585 IYGGAMLSSG SGPVLLRAYC LYVLLLAING VTECFTFAAM SKEEVDRYNF ENSP00000296292/1-541 IYGGTMLSSG SGPVLLRSYC LYVLLLAING VTECFTFAAM SKEEVDRYNF ENSBTAP00000053575/1-541 IYGGAMLSSG SGPVLLRAYC LYVLLLAING VTECFTFAAM SKAEVDRYNF 451 500 ENSTTRP00000002162/1-541 TMLGLSSSFL LLSYLLTHWC GSVGFILANC FNMGIRITQS LCFIHRYYRK bmy_09141T0/1-507 TMLALSSSFL LLAYLLTHWC GSVGFILANC FNMGIRITHS LCFIHHYYRK BACU005576/1-585 TMLALSSSFL LLAYLLTHWC GSVGFILANC FNMGIRITHS LCFIHHYYRK ENSP00000296292/1-541 VMLALSSSFL VLSYLLTRWC GSVGFILANC FNMGIRITQS LCFIHRYYRR ENSBTAP00000053575/1-541 TMLALSSSFL MLSYVLTRWC GSVGFILANC FNMGIRIMQS LYFIYRYYRK 501 550 ENSTTRP00000002162/1-541 SPHKPLAGLF LSPVLLGAFA LSGGITAVSE VFLCCERGWP AMLVHVAVGA bmy_09141T0/1-507 SPHKPLAGLF LSPVLLGAFA LSGGITAVSE VFLCCERGWP AMLLHVAVGA BACU005576/1-585 SPHKPLAGLF LSPVLLGAFA LSGGITAVSK VFLCCERGWP AKLLHVAVGA ENSP00000296292/1-541 SPHRPLAGLH LSPVLLGTFA LSGGVTAVSE VFLCCEQGWP ARLAHIAVGA ENSBTAP00000053575/1-541 SPHRPLDGLF LSPVLLGTFA LSGGITAVSE VFLCCERGWL ARLAHIAVGA 551 600 ENSTTRP00000002162/1-541 LCLGVTLGTA FLTETKLIHF LRTQLGVSRL TDKTT bmy_09141T0/1-507 LCLGATLGTA FLTETKLIHF LRTQLGVSRL TDKTT BACU005576/1-585 LCLGATLGTA FLTETKLIHF LRTQLGVSRL TDKTT ENSP00000296292/1-541 FCLGATLGTA FLTETKLIHF LRTQLGVPRR TDKMT ENSBTAP00000053575/1-541 LCLGVTLGTA FLTETKLIHF LRTQLGVPRL ADKMT