KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:19 2014 Check: 00 .. Name: ENSTTRP00000007108/1-1112 Len: 1137 Check: 8304 Weight: 1.00 Name: BACU017458/1-1035 Len: 1137 Check: 5370 Weight: 1.00 Name: ENSBTAP00000053578/1-1110 Len: 1137 Check: 6981 Weight: 1.00 Name: ENSP00000261574/1-1115 Len: 1137 Check: 1773 Weight: 1.00 Name: bmy_22027T0/1-1114 Len: 1137 Check: 9286 Weight: 1.00 // 1 50 ENSTTRP00000007108/1-1112 IPETQLGKLE ATESPVSAMA AGAAEQQQFY LLLGNLLSPD NVVRKQAEET BACU017458/1-1035 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053578/1-1110 ---------- SLSLTPSAMA AAAAEQQQFY LLLGNLLSPD NVVRKQAEET ENSP00000261574/1-1115 MPEDQVGKLE ATENTISAMA AAAAEQQQFY LLLGNLLSPD NVVRKQAEET bmy_22027T0/1-1114 ---------- --------MA AAAAEQQQFY LLLGNLLSPD NVVRKQAEET 51 100 ENSTTRP00000007108/1-1112 YENIPGQSKI TFLLQAIRNT TAAEEARQMA AVLLRRLLSS AFDEVYPTLP BACU017458/1-1035 ---------- ---------- --------MA AVLLRRLLSS AFDEVYPALP ENSBTAP00000053578/1-1110 YENIPGQSKI TFLLQAIRNT AAAEEARQMA AVLLRRLLSS AFDEVYPTLP ENSP00000261574/1-1115 YENIPGQSKI TFLLQAIRNT TAAEEARQMA AVLLRRLLSS AFDEVYPALP bmy_22027T0/1-1114 YENIPGQSKI TFLLQAIRNT TAAEEARQMA AVLLRRLLSS AFDEVYPALP 101 150 ENSTTRP00000007108/1-1112 TDVQTAIKSE LLMIIQMETQ SSMRKKICDI AAELARNLID EDGNNQWPEG BACU017458/1-1035 PDVQTAIKSE LLMIIQMETQ SSMRKKICDI AAELARNLID EDGNNQWPEG ENSBTAP00000053578/1-1110 TDVQTAIKSE LLMIIQMETQ SSMRKKICDI AAELARNLID EDGNNQWPEG ENSP00000261574/1-1115 SDVQTAIKSE LLMIIQMETQ SSMRKKVCDI AAELARNLID EDGNNQWPEG bmy_22027T0/1-1114 PDVQTAIKSE LLMIIQMETQ SSMRKKXCDI AAELARNLID EDGNNQWPEG 151 200 ENSTTRP00000007108/1-1112 LKFLFDSVSS QNVGLREAAL HIFWNFPGIF GNQQQHYLDV IKRMLVQCMQ BACU017458/1-1035 LKFLFDSVSS QNVGLREAAL HIFWNFPGIF GNQQQHYLDV IKRMLVQCMQ ENSBTAP00000053578/1-1110 LKFLFDSVSS QNMGLREAAL HIFWNFPGIF GNQQQHYLDV IKRMLVQCMQ ENSP00000261574/1-1115 LKFLFDSVSS QNVGLREAAL HIFWNFPGIF GNQQQHYLDV IKRMLVQCMQ bmy_22027T0/1-1114 LKFLFDSVSS QNVGLREAAL HIFWNFPGIF GNQQQHYLDV IKRMLVQCMQ 201 250 ENSTTRP00000007108/1-1112 DQEHPSIRTL SARATAAFIL ANEHNVALFK HFADLLPGFL QAVNDSCYQN BACU017458/1-1035 DQEHPSIRTL SARATAAFIL ANEHNVALFK HFADLLPGFL QAVNDSCYQN ENSBTAP00000053578/1-1110 DQEHPSIRTL SARATAAFIL ANEHNVALFK HFADLLPGFL QAVNDSCYQN ENSP00000261574/1-1115 DQEHPSIRTL SARATAAFIL ANEHNVALFK HFADLLPGFL QAVNDSCYQN bmy_22027T0/1-1114 DQEHPSIRTL SARATAAFIL ANEHNVALFK HFADLLPGFL QAVNDSCYQN 251 300 ENSTTRP00000007108/1-1112 DDSVLKSLVE IADTVPKYLR PHLEATLQLS LKLCGDTSLN NMQRQLALEV BACU017458/1-1035 DDSVLKSLVE IADTVPKYLR PHLEATLQLS LKLCGDTSLN NMQRQLALEV ENSBTAP00000053578/1-1110 DDSVLKSLVE IADTVPKYLR PHLEATLQLS LKLCGDTGLN NMQRQLALEV ENSP00000261574/1-1115 DDSVLKSLVE IADTVPKYLR PHLEATLQLS LKLCGDTSLN NMQRQLALEV bmy_22027T0/1-1114 DDSVLKSLVE IADTVPKYLR PHLEATLQLS LKLCGDTSLN NMQRQLALEV 301 350 ENSTTRP00000007108/1-1112 IVTLSETAAA MLRKHTNIVA QTIPQMLAMM VDLEEDEDWA NADELEDDDF BACU017458/1-1035 IVTLSETAAA MLRKHTNIVA QTIPQMLAMM VDLEEDEDWA NADELEDDDF ENSBTAP00000053578/1-1110 IVTLSETAAA MLRKHTNIVA QTIPQMLAMM VDLEEDEDWA NADELEDDDF ENSP00000261574/1-1115 IVTLSETAAA MLRKHTNIVA QTIPQMLAMM VDLEEDEDWA NADELEDDDF bmy_22027T0/1-1114 IVTLSETAAA MLRKHTNIVA QTIPQMLAMM VDLEEDEDWA NADELEDDDF 351 400 ENSTTRP00000007108/1-1112 DXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXDW KYRHAGLMAL BACU017458/1-1035 DSNAVAGESA LDRMACGLGG KLVLPMIKEH IMQMLQNPDW KYRHAGLMAL ENSBTAP00000053578/1-1110 DSNAVAGESA LDRMACGLGG KLVLPMIKEH IMQMLQNPDW KYRHAGLMAL ENSP00000261574/1-1115 DSNAVAGESA LDRMACGLGG KLVLPMIKEH IMQMLQNPDW KYRHAGLMAL bmy_22027T0/1-1114 DSNAVAGESA LDRMACGLGG KLVLPMIKEH IMQMLQNPDW KYRHAGLMAL 401 450 ENSTTRP00000007108/1-1112 SAIGEGCHQQ MEGILNEIVN FVLLFLQDPH PRVRYAACNA VGQMATDFAP BACU017458/1-1035 SAIGEGCHQQ MEGILNEIVN FVLLFLQDPH PRVRYAACNA VGQMATDFAP ENSBTAP00000053578/1-1110 SAIGEGCHQQ MEGILNEIVN FVLLFLQDPH PRVRYAACNA VGQMATDFAP ENSP00000261574/1-1115 SAIGEGCHQQ MEGILNEIVN FVLLFLQDPH PRVRYAACNA VGQMATDFAP bmy_22027T0/1-1114 SAIGEGCHQQ MEGILNEIVN FVLLFLQDPH PRVRYAACNA VGQMATDFAP 451 500 ENSTTRP00000007108/1-1112 GFQKKFHEKV IAALLQTMED QGNQRVQAHA AAALINFTED CPKSLLIPYL BACU017458/1-1035 GFQKKFHEKV IAALLQTMED QGNQRVQAHA AAALINFTED CPKSLLIPYL ENSBTAP00000053578/1-1110 GFQKKFHEKV IAALLQTMED QGNQRVQAHA AAALINFTED CPKSLLIPYL ENSP00000261574/1-1115 GFQKKFHEKV IAALLQTMED QGNQRVQAHA AAALINFTED CPKSLLIPYL bmy_22027T0/1-1114 GFQKKFHEKV IAALLQTMED QGNQRVQAHA AAALINFTED CPKSLLIPYL 501 550 ENSTTRP00000007108/1-1112 DNLVKHLHSI MVLKLQELIQ KGTKLVLEQV VTSIASVADT AEEKFVPYYD BACU017458/1-1035 DNLVKHLHSI MVLKLQELIQ KGTKLVLEQV VTSIASVADT AEEKFVPYYD ENSBTAP00000053578/1-1110 DSLVKHLHSI MVLKLQELIQ KGTKLVLEQV VTSIASVADT AEEKFVPYYD ENSP00000261574/1-1115 DNLVKHLHSI MVLKLQELIQ KGTKLVLEQV VTSIASVADT AEEKFVPYYD bmy_22027T0/1-1114 DNLVKHLHSI MVLKLQELIQ KGTKLVLEQV VTSIASVADT AEEKFVPYYD 551 600 ENSTTRP00000007108/1-1112 LFMPSLKHIV ENAVQKELRL LRGKTIECIS LIGLAVGKEK FMQDASDVMQ BACU017458/1-1035 LFMPSLKHIV ENAVQKELRL LRGKTIECIS LIGLAVGKEK FMQDASDVMQ ENSBTAP00000053578/1-1110 LFMPSLKHIV ENAVQKELRL LRGKTIECIS LIGLAVGKEK FMQDASDVMQ ENSP00000261574/1-1115 LFMPSLKHIV ENAVQKELRL LRGKTIECIS LIGLAVGKEK FMQDASDVMQ bmy_22027T0/1-1114 LFMPSLKHIV ENAVQKELRL LRGKTIECIS LIGLAVGKEK FMQDASDVMQ 601 650 ENSTTRP00000007108/1-1112 LLLKTQTDFS DMEDDDPQIS YMISAWARMC KILGKEFQQY LPVVMGPLLK BACU017458/1-1035 LLLKTQTDFS DMEDDDPQIS YMISAWARMC KILGKEFQQY LPVVMGPLMK ENSBTAP00000053578/1-1110 LLLKTQTDFS DMEDDDPQIS YMISAWARMC KILGKEFQQY LPVVMGPLMK ENSP00000261574/1-1115 LLLKTQTDFN DMEDDDPQIS YMISAWARMC KILGKEFQQY LPVVMGPLMK bmy_22027T0/1-1114 LLLKTQTDFS DMEDDDPQIS YMISAWARMC KILGKEFQQY LPVVMGPLMK 651 700 ENSTTRP00000007108/1-1112 TASIKPEVAL LDTQDMENMS DDDGWEFVNL GDQQSFGIKT AGLEEKSTAC BACU017458/1-1035 TASIKPEVAL LDTQDMENMS DDDGWEFVNL GDQQSFGIKT AGLEEKSTAC ENSBTAP00000053578/1-1110 TASIKPEVAL LDTQDMENMS DDDGWEFVNL GDQQSFGIKT AGLEEKSTAC ENSP00000261574/1-1115 TASIKPEVAL LDTQDMENMS DDDGWEFVNL GDQQSFGIKT AGLEEKSTAC bmy_22027T0/1-1114 TASIKPEVAL LDTQDMENMS DDDGWEFVNL GDQQSFGIKT AGLEEKSTAC 701 750 ENSTTRP00000007108/1-1112 QMLVCYAKEL KEGFVEYTEQ VVKLMVPLLK FYFHDG---- -VXXXXXXXX BACU017458/1-1035 QMLVCYAKEL KEGFVEYTEQ VVKLMVPLLK FYFHDG---- -VRVAAAESM ENSBTAP00000053578/1-1110 QMLVCYAKEL KEGFVEYTEQ VVKLMVPLLK FYFHDDILIK RVRVAAAESM ENSP00000261574/1-1115 QMLVCYAKEL KEGFVEYTEQ VVKLMVPLLK FYFHDG---- -VRVAAAESM bmy_22027T0/1-1114 QMLVCYAKEL KEGFVEYTEQ VVKLMVPLLK FYFHDG---- -VRVAAAESM 751 800 ENSTTRP00000007108/1-1112 XXXXXXXXXX XXXXXXXXXX FMCDALIKVI GTEPD-DVLS EIMHS-AK-- BACU017458/1-1035 PLLLECARVR GPEYLTQMWH FMCDALIKAI GTEPDSDVLS EIMHSFAK-- ENSBTAP00000053578/1-1110 PLLLECARVR GPEYLTQMWH FMCDALIKAI GTEPDSDVLS EIMHSFAK-- ENSP00000261574/1-1115 PLLLECARVR GPEYLTQMWH FMCDALIKAI GTEPDSDVLS EIMHSFAK-- bmy_22027T0/1-1114 PLLLECARVR GPEYLTQMWH FMCDALIKAI GTEPDSDVLS EIMHSFAKSS 801 850 ENSTTRP00000007108/1-1112 ---------- -----CIEVM GDGCLNNEHF EELGGILKAK LEEHFKNQEL BACU017458/1-1035 ---------- -----CIEVM GDGCLNNEHF EELGGILKAK LEEHFKNQEL ENSBTAP00000053578/1-1110 ---------- -----CIEVM GDGCLNNEHF EELGGILKAK LEEHFKNQEL ENSP00000261574/1-1115 ---------- -----CIEVM GDGCLNNEHF EELGGILKAK LEEHFKNQEL bmy_22027T0/1-1114 SSCILVFISF HHHYLCIEVM GDGCLNNEHF EELGGILKAK LEEHFKNQEL 851 900 ENSTTRP00000007108/1-1112 RQVKRQDEDY DEQVEESLQD EDDNDVYILT KVSDILHSIF SSY-EKVLPW BACU017458/1-1035 RQVKRQDEDY DEQVEESLQD EDDNDVYILT KVSDILHSIF SSYKEKVLPW ENSBTAP00000053578/1-1110 RQVKRQDEDY DEQVEESLQD EDDNDVYILT KVSDILHSIF SSYKEKVLPW ENSP00000261574/1-1115 RQVKRQDEDY DEQVEESLQD EDDNDVYILT KVSDILHSIF SSYKEKVLPW bmy_22027T0/1-1114 RQVKRQDEDY DEQVEESLQD EDDNDVYILT KVSDILHSIF SSYKEKVLPW 901 950 ENSTTRP00000007108/1-1112 FEQLLPLIVN LXCLHRPWPD RQWGLCIFDD VIEHCSPASF KYAEYFIRPM BACU017458/1-1035 FEQLLPLIVN LICLHRPWPD RQWGLCIFDD VIEHCSPASF KYAEYFIRPM ENSBTAP00000053578/1-1110 FEQLLPLIVN LICPHRPWPD RQWGLCIFDD VIEHCSPASF KYAEYFLRPM ENSP00000261574/1-1115 FEQLLPLIVN LICPHRPWPD RQWGLCIFDD VIEHCSPASF KYAEYFLRPM bmy_22027T0/1-1114 FEQLLPLIVN LICLHRPWPD RQWGLCIFDD VIEHCSPASF KYAEYFIRPM 951 1000 ENSTTRP00000007108/1-1112 LQYTCDSSPE VRQAAAYGLG VMAQYGGDNY RPFCTEALPL LVRVIQSADS BACU017458/1-1035 LQYTCDSSPE VRQAAAYGLG VMAQYGGDNY RPFCTEALPL LVRVIQSADS ENSBTAP00000053578/1-1110 LQYVCDSSPE VRQAAAYGLG VMAQYGGDNY RPFCTEALPL LVRVIQSADA ENSP00000261574/1-1115 LQYVCDNSPE VRQAAAYGLG VMAQYGGDNY RPFCTEALPL LVRVIQSADS bmy_22027T0/1-1114 LQYTCDSSPE VRQAAAYGLG VMAQYGGDNY RPFCTEALPL LVRVIQSADS 1001 1050 ENSTTRP00000007108/1-1112 KTKENINATE NCISAVGKIM KFKPDCVNVE EVLPHWLSWL PLHEDKEEAV BACU017458/1-1035 KTKENINATE NCISAVGKIM KFKPDCVNVE EVLPHWLSWL PLHEDKEEAV ENSBTAP00000053578/1-1110 KTKENINATE NCISAVGKMM KFKPDCVNVE EVLPHWLSWL PLHEDKEEAV ENSP00000261574/1-1115 KTKENVNATE NCISAVGKIM KFKPDCVNVE EVLPHWLSWL PLHEDKEEAV bmy_22027T0/1-1114 KTKENINATE NCISAVGKIM KFKPDCVNVE EVLPHWLSWL PLHEDKEEAV 1051 1100 ENSTTRP00000007108/1-1112 QTFNYLCDLI ESNHPIVLGP NNTNLPKIFS IIAEGEMHEA IKHEDPCAKR BACU017458/1-1035 QTFNYLCDLI ESNHPIVLGP NNTNLPKIFS IIAEGEMHEA IKHEDPCAKR ENSBTAP00000053578/1-1110 QTFNYLCDLI ESNHPIVLGP NNTNLPKIFS IIAEGEMHEA IKHDDPCAKR ENSP00000261574/1-1115 QTFNYLCDLI ESNHPIVLGP NNTNLPKIFS IIAEGEMHEA IKHEDPCAKR bmy_22027T0/1-1114 QTFNYLCDLI ESNHPIVLGP NNTNLPKIFS IIAEGEMHEA IKHEDPCAKR 1101 1150 ENSTTRP00000007108/1-1112 LANVVRQVQT SGGLWTECIA QLSPEQQAAI QELLNSA BACU017458/1-1035 LANVVRQVQA YAVTQFGKLF SFQPLNVKCR WHVWQ-- ENSBTAP00000053578/1-1110 LANVVRQVQT SGGLWTECIA QLSPEQQAAI QELLNSA ENSP00000261574/1-1115 LANVVRQVQT SGGLWTECIA QLSPEQQAAI QELLNSA bmy_22027T0/1-1114 LANVVRQVQT SGGLWTECIA QLSPEQQAAI QELLNSA