KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:27 2014 Check: 00 .. Name: ENSTTRP00000014959/1-707 Len: 737 Check: 8914 Weight: 1.00 Name: ENSP00000351605/1-706 Len: 737 Check: 6320 Weight: 1.00 Name: ENSBTAP00000053592/1-714 Len: 737 Check: 3478 Weight: 1.00 Name: bmy_00483T0/1-734 Len: 737 Check: 5420 Weight: 1.00 Name: BACU004814/1-678 Len: 737 Check: 7660 Weight: 1.00 // 1 50 ENSTTRP00000014959/1-707 ------METF TFLWTCIFLP LVRGH----- ---------- -SLFTCEPIT ENSP00000351605/1-706 ------MEMF TFLLTCIFLP LLRGH----- ---------- -SLFTCEPIT ENSBTAP00000053592/1-714 ------METF TFLWTCIFLP LVRGH----- ---------- -SLFTCEPIT bmy_00483T0/1-734 MSCGTQCPNP QGLSSGLLTQ KQNGLRTTEV EERRKNYRRK IKLEKVKPSD BACU004814/1-678 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014959/1-707 VPRCMKMAYN MTFFPNLMGH YDQSIAAVEM ELFLPLANLE CSPNVETFLC ENSP00000351605/1-706 VPRCMKMAYN MTFFPNLMGH YDQSIAAVEM EHFLPLANLE CSPNIETFLC ENSBTAP00000053592/1-714 VPRCMKMAYN MTFFPNLMGH YDQSIAAVEM EIFLPLANLE CSPNVETFLC bmy_00483T0/1-734 KQRCMKMAYN MTFFPNLMGH YDQSIAAVEM ELFLPLANLE CSPNVETFLC BACU004814/1-678 ------MAYN MTFFPNLMGH YDQSIAAVEM ELFLPLANLE CSPNVETFLC 101 150 ENSTTRP00000014959/1-707 KAFVPTCTEQ IDVVPPCRKF CEKVYSDCKK LMDTFGIRWP EELECDRLQY ENSP00000351605/1-706 KAFVPTCIEQ IHVVPPCRKL CEKVYSDCKK LIDTFGIRWP EELECDRLQY ENSBTAP00000053592/1-714 KAFVPTCTEQ IHVVPPCRKF CEKVYSDCKK LMDTFGIRWP EELECDRLQY bmy_00483T0/1-734 KAFVPTCTEQ IDVVPPCRKF CEKVYSDCKK LMDTFGIRWP EELECDRLQY BACU004814/1-678 KAFVPTCTEQ VDVVPPCRKF CEKVYSDCKN LMDTFGIRWP EELECDRLQY 151 200 ENSTTRP00000014959/1-707 CDESVPVTFD QHTEFLSPHK KTEQVQRDIG FWCPRHLKTS GGQGYKFLGI ENSP00000351605/1-706 CDETVPVTFD PHTEFLGPQK KTEQVQRDIG FWCPRHLKTS GGQGYKFLGI ENSBTAP00000053592/1-714 CDESVPATFN PHTELLGPHK KSEQIRRDIG FWCPRHLKTS GGQGYKFLGI bmy_00483T0/1-734 CDESVPVTFD QHTEFLSPHK KTEQVQRDIG FWCPRHLKTS GGQGYKFLGI BACU004814/1-678 CDESVPVTFD QHTEFLSPHK KTEQVQRDIG FWCPRHLKTS GGQGYKFLGI 201 250 ENSTTRP00000014959/1-707 DQCAPPCPNM YFKSDELEFA KSFIGIVSIF CLCATLFTFL TFLIDVRRFR ENSP00000351605/1-706 DQCAPPCPNM YFKSDELEFA KSFIGTVSIF CLCATLFTFL TFLIDVRRFR ENSBTAP00000053592/1-714 DQCAPPCPNM YFKSDELEFA KSFIGIVSIF CLCATLFTFL TFLIDVRRFR bmy_00483T0/1-734 DQCAPPCPNM YFKSDELEFA KSFIGIVSIF CLCATLFTFL TFLIDVRRFR BACU004814/1-678 DQCAPPCPNM YFKSDELEFA KSFIGIVSIF CLCATLFTFL TFLIDVRRFR 251 300 ENSTTRP00000014959/1-707 YPERPIIYYS VCYSIVSLMY FIGFLLGNST ACNKADEKLE LGDTVVLGSQ ENSP00000351605/1-706 YPERPIIYYS VCYSIVSLMY FIGFLLGDST ACNKADEKLE LGDTVVLGSQ ENSBTAP00000053592/1-714 YPERPIIYYS VCYSIVSLMY FIGFLLGNST ACNKADEKLE LGDTVVLGSQ bmy_00483T0/1-734 YPERPIIYYS VCYSIVSLMY FIGFLLGNST ACNKADEKLE LGDTVVLGSQ BACU004814/1-678 YPERPIIYYS VCYSIVSLMY FIGFLLGNST ACNKADEKLE LGDTVVLGSQ 301 350 ENSTTRP00000014959/1-707 NKACTVLFMF LYFFTMAGTV WWVILTITWF LAAGRKWSCE AIEQKAVWFH ENSP00000351605/1-706 NKACTVLFML LYFFTMAGTV WWVILTITWF LAAGRKWSCE AIEQKAVWFH ENSBTAP00000053592/1-714 NKACTILFMF LYFFTMAGTV WWVMLTITWF LAAGRKWSCE AIEQNAVWFH bmy_00483T0/1-734 NKACTVLFMF LYFFTMAGTV WWVILTITWF LAAGRKWSCE AIEQKAVWFH BACU004814/1-678 NKACTVLFMF LYFSTMAGTV WWVILTITWF LAAGRKWSCE AIEQKAVWFH 351 400 ENSTTRP00000014959/1-707 AVAWGIPGFL TVMLLAMNKV EGDNISGVCF VGLYDLDASR YFVLLPLCLC ENSP00000351605/1-706 AVAWGTPGFL TVMLLAMNKV EGDNISGVCF VGLYDLDASR YFVLLPLCLC ENSBTAP00000053592/1-714 AVAWGIPGFL TIMLLAMSKV EGDNISGVCF VGLYDLDASR YFVLLPLCLC bmy_00483T0/1-734 AVAWGIPGFL TIMLLAMNKV EGDNISGVCF VGLYDLDASR YFVLLPLCLC BACU004814/1-678 AVAWGIPGFL TIMLLAMNKV EGDNISGVCF VGLYDLDASR YFVLLPLCLC 401 450 ENSTTRP00000014959/1-707 VFVGLSLLLA GIISLNHVRQ VIQHDGRNQE KLKKFMIRIG VFSGLYLVPL ENSP00000351605/1-706 VFVGLSLLLA GIISLNHVRQ VIQHDGRNQE KLKKFMIRIG VFSGLYLVPL ENSBTAP00000053592/1-714 VFVGLSLLLA GIISLNHVRQ VIQHDGRNQE KLKKFMIRIG VFSGLYLVPL bmy_00483T0/1-734 VFVGLSLLLA GIISLNHVRQ VIQHDGRNQE KLKKFMIRIG VFSGLYLVPL BACU004814/1-678 VFVGLSLLLA GIISLNHVRQ VIQHDGRNQE KLKKFMIRIG VFSGLYLVPL 451 500 ENSTTRP00000014959/1-707 VTLLGCYVYE QVNRITWEIT WVSDHCRQYH IPCPYQXXXX XXXXXXXXXX ENSP00000351605/1-706 VTLLGCYVYE QVNRITWEIT WVSDHCRQYH IPCPYQAKAK ARPELALFMI ENSBTAP00000053592/1-714 VTLLGCYVYE QVNRITWEIT WVSDHCRQYH IPCPYQANTE TRPELALFMI bmy_00483T0/1-734 VTLLGCYVYE QVNRITWEIT WVSDHCRQYH IPCPYQAKTE TRPELALFMI BACU004814/1-678 VTLLGCYVYE QVNRITWEIT WVSDHCRQYH IPCPYQAKTE TRPELALFMI 501 550 ENSTTRP00000014959/1-707 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXPISE SRRVLQESCE ENSP00000351605/1-706 KYLMTLIVGI SAVFWVGSKK TCTEWAGFFK RNRKRDPISE SRRVLQESCE ENSBTAP00000053592/1-714 KYLMTLIVGI SAVFWVGSKK TCTEWAGFFK RNRKKDPISE SRRVLQESCE bmy_00483T0/1-734 KYLMTLIVGI SAVFWVGSKK TCTEWAGFFK RSRKKDPISE SRRVLQESCE BACU004814/1-678 KYLMTLIVGI SAVFWVGSKK TCTEWAGFFK RSRKKDPISE SRRVLQESCE 551 600 ENSTTRP00000014959/1-707 FFLKHNSKVK HKKKHYKPSS HKLKVISKSM GTSTGATANH GTSAVAITNH ENSP00000351605/1-706 FFLKHNSKVK HKKKHYKPSS HKLKVISKSM GTSTGATANH GTSAVAITSH ENSBTAP00000053592/1-714 FFLKHNSKVK HKKKHYKPSS HKLKVISKSM GTSTGATANH GTSAVAITNH bmy_00483T0/1-734 FFLKHNSKVK HKKKHYKPSS HKLKVISKSM GTSTGATANH GTSAVAITNH BACU004814/1-678 FFLKHNSKVK HKKKHYKPSS HKLKVISKSM GTSTGATANH GTSAVAITNH 601 650 ENSTTRP00000014959/1-707 DYLGQETLTE IQTSPETSPV REVRADGAST SKLREQDCEE PASPAASSSK ENSP00000351605/1-706 DYLGQETLTE IQTSPETS-M REVKADGAST PRLREQDCGE PASPAASISR ENSBTAP00000053592/1-714 DYLGQETLTE IQTSPETS-V REVRGDGAST PKLRERDCEE PASSAAPSSK bmy_00483T0/1-734 GYLGQETLTE IQTSPETS-V REVRADGAST SKLREQDCEE PASPAASSSK BACU004814/1-678 DYLGRETLTE IQTSPETS-V REVRADGVST SKLREQDCEE PASPAASSSK 651 700 ENSTTRP00000014959/1-707 LCGEQTD--G KGRAG----- -SVSESARSE GRVTPKSDVT ETGPVQSNSL ENSP00000351605/1-706 LSGEQVD--G KGQAG----- -SVSESARSE GRISPKSDIT DTGLAQSNNL ENSBTAP00000053592/1-714 LCREQMDKKG HGRAGKVNDK SSVSESARSE GRVTPKSDVP ESGPVQSNSM bmy_00483T0/1-734 LCGEQTD--G KGRAGNVNDK SSVSESARSE GRVTPKSDVT ETGPVQSHSL BACU004814/1-678 LCGEQTD--G KGRAGNVNDK SSMSESAWSE GRVTPKSDVT ETGPVQSHSL 701 750 ENSTTRP00000014959/1-707 HVPRSSEPSS LKGCTSLLVH SASGVGKEQG TGGHSDT ENSP00000351605/1-706 QVPSSSEPSS LKGSTSLLVH PVSGVRKEQG GGCHSDT ENSBTAP00000053592/1-714 QASSSPEPSS LKGSTSLLVH SASGVGKEQG AGGRSDT bmy_00483T0/1-734 HVPRSSEPSS LKGSTSLLVH SASGVGKEQG TGGHSDT BACU004814/1-678 HVPRSSEPSS LKGSTSLLVH SASGVGKEQG TGGHSDT