KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:07:34 2014 Check: 00 .. Name: bmy_14484T0/1-489 Len: 526 Check: 868 Weight: 1.00 Name: ENSTTRP00000015395/1-425 Len: 526 Check: 8164 Weight: 1.00 Name: ENSP00000217185/1-451 Len: 526 Check: 5817 Weight: 1.00 Name: ENSBTAP00000053595/1-446 Len: 526 Check: 7632 Weight: 1.00 // 1 50 bmy_14484T0/1-489 MGSPGQAPLG PKYVGLWDFE ACTAEELSFR AGDLFHVARK EEEWWRTVLL ENSTTRP00000015395/1-425 ----QQEH-- -KYVGLWDFE ARTAQELSFR AGDLFHVARK EEEWWWTVLL ENSP00000217185/1-451 MVSRDQAHLG PKYVGLWDFK SRTDEELSFR AGDVFHVARK EEQWWWATLL ENSBTAP00000053595/1-446 ----GQVPLG PRYMGLWDFE ARTAEELSFQ AGDLFYVARK EEEWWWAVRL 51 100 bmy_14484T0/1-489 DGVGRALA-- --------EK ETVGLEPWFF GRISHSEALH RLQAAGNELG ENSTTRP00000015395/1-425 DRVGRALA-- ---------K ETVGLEPWFF GPISLSEALH RLQATGNELG ENSP00000217185/1-451 DEAGGAVAQG YVPHNYLAER ETVESEPWFF GCISRSEAVR RLQAEGNATG ENSBTAP00000053595/1-446 DGAGRALAEG YVPYNYLAEK ETVESEPWFF GRISRSEALH RLQAMGNEQG 101 150 bmy_14484T0/1-489 AFLIRVSEKP GANCVLSVRD QQTVRHYKIW WQD-GQLHLN EAVSFPSLPE ENSTTRP00000015395/1-425 AFLIRVSEKL GANCVLSVRD QQTVRHYKIW WQD-GQLHLN EAVSFLSLPK ENSP00000217185/1-451 AFLIRVSEKP SADYVLSVRD TQAVRHYKIW RRAGGRLHLN EAVSFLSLPE ENSBTAP00000053595/1-446 SFLIRISEKP GADYVLSVRD QQTVRHYKIW WRA-GRLHLN EAVSFPGLSE 151 200 bmy_14484T0/1-489 LVDHHKAQSL SHGLWLTSPR RKVGPLPPAR PCPCPCPLQG RKPSGGGHGP ENSTTRP00000015395/1-425 LVDHHEAQSL SHGLWLTSPC RKHELEPL-- ---------- ---------P ENSP00000217185/1-451 LVNYHRAQSL SHGLRLAAPC RKHEPEPL-- ---------- ---------P ENSBTAP00000053595/1-446 LVDHHKVQSL SHGLRLTSPC RKHEPEPL-- ---------- ---------P 201 250 bmy_14484T0/1-489 TFED--RPGA DFRRTGAPAP CPCSMSRSPC PTVTTGRGRG KSSRSAGSWA ENSTTRP00000015395/1-425 HCDDWERPRE EFTL------ ---------C RKLGSG---- ---------- ENSP00000217185/1-451 HWDDWERPRE EFTL------ ---------C RKLGSG---- ---------- ENSBTAP00000053595/1-446 HCDDWERPRE EFTL------ ---------C RKLGSG---- ---------- 251 300 bmy_14484T0/1-489 SGYFGEVIEG LWKDKVRVAI KVIVRGERAP GHGLLALL-- MGQLRHEHIL ENSTTRP00000015395/1-425 --YFGEVFKG LWKDKVRVAI KVIVRDSRLR RHTXXXXXXX XXXXXXXXXX ENSP00000217185/1-451 --YFGEVFEG LWKDRVQVAI KVISRDNLLH QQMLQSEIQA MKKLRHKHIL ENSBTAP00000053595/1-446 --YFGEVFEG LWKDKVRVAI KVIARADLLH QHTFQSEIQA MKKLRHKHIL 301 350 bmy_14484T0/1-489 APYAVAPVGD PVHIIAELLP EGSLLELLRP VCRGRGPGWP HSPWPPRASA ENSTTRP00000015395/1-425 XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- ---------- ---------- ENSP00000217185/1-451 ALYAVVSVGD PVYIITELMA KGSLLELLR- ---------- ---------- ENSBTAP00000053595/1-446 ALYAVASAGD PVYIVTELMP KGSLLELLR- ---------- ---------- 351 400 bmy_14484T0/1-489 DSDEKTLPIS ELVGIAAQVA EGMCYLESQN YIHGDLAARN ILVGENNICK ENSTTRP00000015395/1-425 XSDEKTLPIS ELVGIAAQVA GGMCYLELHN YIHGDLAARN ILVGENNICK ENSP00000217185/1-451 DSDEKVLPVS ELLDIAWQVA EGMCYLESQN YIHRDLAARN ILVGENTLCK ENSBTAP00000053595/1-446 DSDEKALPVS ELMDIAAQVA EGMCYLESQN YIHRDLAARN ILVGENNICK 401 450 bmy_14484T0/1-489 IRDFGLARLI KKNVHPSHDH SIPYKWTTPE APSRGHYSIK SDIWSFGVLL ENSTTRP00000015395/1-425 IGDLGLGRLI K-NVYLFHDH SIPYKWTAPE ALSRGHYSIK SDTWSFGVLL ENSP00000217185/1-451 VGDFGLARLI KEDVYLSHDH NIPYKWTAPE ALSRGHYSTK SDVWSFGILL ENSBTAP00000053595/1-446 VGDFGLARLI KEDIYLSYDH NIPYKWTAPE ALSRGHYSIK SDIWSFGVLL 451 500 bmy_14484T0/1-489 HEIFSRGHMS YPGTGRPVLP TAGRAGGGRH LDTAP--APF TGCLM----- ENSTTRP00000015395/1-425 HEISSRGQMP CPGTSA---- L--LVEAGYR MPCPLECPPN THKLMLSCWH ENSP00000217185/1-451 HEMFSRGQVP YPGMSNHEAF L--RVDAGYR MPCPLECPPS VHKLMLTCWC ENSBTAP00000053595/1-446 HEIFSRGQMP YPGMSNHEAF L--RVESGYR MPRPPECPPT THKLMLSCWH 501 550 bmy_14484T0/1-489 --PSRRHRPE GGR------- ------ ENSTTRP00000015395/1-425 RDPEQRPRFK GLREELSSLR RYES-- ENSP00000217185/1-451 RDPEQRPCFK ALRERLSSFT SYENPT ENSBTAP00000053595/1-446 KDPEQRPYFK GLWEKLSSLT RYENPL