KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:34 2014 Check: 00 .. Name: ENSBTAP00000053598/1-573 Len: 641 Check: 73 Weight: 1.00 Name: ENSP00000428263/1-621 Len: 641 Check: 3772 Weight: 1.00 Name: ENSTTRP00000012899/1-576 Len: 641 Check: 8391 Weight: 1.00 Name: bmy_14445T0/1-427 Len: 641 Check: 8348 Weight: 1.00 Name: BACU008778/1-410 Len: 641 Check: 3008 Weight: 1.00 // 1 50 ENSBTAP00000053598/1-573 ---------- ---------- ---------- -------LQP ASVVVPPRHL ENSP00000428263/1-621 MPFTLHLRSR LPSAIRSL-- ILQKKPNIRN TSSMAGELRP ASLVVLPRSL ENSTTRP00000012899/1-576 MTFPLPLKSR LPSAVRSL-- ILQKKPNLRN MSSMARGLQP ASVVALPRSL bmy_14445T0/1-427 ---------M LGNDICGFDS LLFSKEKRET SQQKGGFLES DQVLLTGSHL BACU008778/1-410 ---------- ---------- ---------- ---------- -MAERAPLSF 51 100 ENSBTAP00000053598/1-573 ALAFEK---- ----LCQANS GPLL-----L LGQSEPDKWN CPLWPLFQAP ENSP00000428263/1-621 APAFER---- ----FCQVNT GPLP-----L LGQSEPEKWM LPPQGAISE- ENSTTRP00000012899/1-576 APAFEK---- ----FCQVNS GPLP-----L LGQSEPGKWT LPALGAVPG- bmy_14445T0/1-427 TLLLESSVAH AGXTFTLHLK SRLPSAVRSL ILQKKPNIRI MSSMA----- BACU008778/1-410 SCWFDW---- ----FPVEVT GNI------- ---------- ---------- 101 150 ENSBTAP00000053598/1-573 EKMGCPQFGE CEFSVYTGSL PSLEESSEQL KDTVTFLLGG SFSLDPSL-- ENSP00000428263/1-621 TRMGHPQFWK YEFGACTGSL ASLEQYSEQL KDMVAFFLGC SFSLEEALEK ENSTTRP00000012899/1-576 TRTGCP-FWK YEFGTCTGSL TSLEESSGQL KDMMAFLLGS SFSLEGAWEK bmy_14445T0/1-427 RGTGCPQFWK YEFSTCTGSL TSLEESSEQL KDMVAFLLGS SFSLEGAWEK BACU008778/1-410 IGTGCPQFWK YEFGTCTGSL TSLDESSEQL KDMVAFLLGS SFSLEGAWEK 151 200 ENSBTAP00000053598/1-573 ASTPRFHPAA DRQ-----TA VSYAIITGFC CPLVVTMMPA PKDKLGRLGQ ENSP00000428263/1-621 AGLPRRDPAG HSQAGAYKTT VPCVTHAGFC CPLVVTMRPI PKDKLEGLVR ENSTTRP00000012899/1-576 GGLPRRDSAG HGHKGAYKTE VPCATIAGFC CPLVVTVRPV PKDKLEQLVQ bmy_14445T0/1-427 GGLPRRDSAG HGHMGAYKTE VPCATIAGFC CPLVVTMRPV PKDKLERLVQ BACU008778/1-410 GGLPRRDSAG HGHMGAYKTE VPCVTIAGFC CPLVVTMRPV PKDKLERLVR 201 250 ENSBTAP00000053598/1-573 ATWSMPGKD- KAIHSGDPEE LLGIRDLSKP DYREVVVCQP GRVPVFWPSQ ENSP00000428263/1-621 ACCSLGGEQG QPVHMGDP-E LLGIKELSKP AYGDAMVCPP GEVPVFWPSP ENSTTRP00000012899/1-576 ACCSVGG--- ---------E LLGIKDLSKP DHGEPVVCQP GHVPVFWPSQ bmy_14445T0/1-427 ACCSLGGEHG QPVHIGD--- ---------- ---------P GQCPL----- BACU008778/1-410 ACCSLGGEHG QPVHIGDP-E PLGIKDLSKP DFGEPVVCQP GHVPVFWPSQ 251 300 ENSBTAP00000053598/1-573 LTSLKAVGSC IIKLRFSNSH QGCTVTTNLK GTATPTRHLT PEGIPESHHI ENSP00000428263/1-621 LTSLGAVSSC ETPLAFA-SI PGCTVMTDLK DAKAPPGCLT PERIPEVHHI ENSTTRP00000012899/1-576 LTSLEAVSAY KMPLAFT-SA PACTVMTDLK GTAAPARCLT PEGMPEVHHI bmy_14445T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU008778/1-410 LTSLEAVSAC RMPLAFT-SA PGCTVMTDLK GTAAPARCLT PEGMPEVHHI 301 350 ENSBTAP00000053598/1-573 SQDPLHYSMA SAAAIQRISE LEEHMGFPPG PQAAGRWVSC LGELLQASLA ENSP00000428263/1-621 SQDPLHYSIA SVSASQKIRE LESMIGIDPG NRGIGHLL-C KDELLKASLS ENSTTRP00000012899/1-576 SQDPLHCSMA SASVAQRVRE LEMIIAIDPG SRGLGHLL-R PGKLLRAFLS bmy_14445T0/1-427 ---------- ---------- ---------- SRGIGHLL-R PGELLRASLS BACU008778/1-410 SQDPLHCSMA SASVAQKIRE LEIIIAIDPG SRGIGHLL-R PGELLRASLS 351 400 ENSBTAP00000053598/1-573 RSHARSVLLT TIFPMYFNYW PP---DRLPG AVALAAFLQA LEKGSSMVVK ENSP00000428263/1-621 LSHARSVLIT TGFPTHFNHE PPEETDGPPG AVALVAFLQA LEKEVAIIVD ENSTTRP00000012899/1-576 PSHTRSVLRT TGFPTHLNHE PPEETDGPLG AAALAAFLQA WEKGVSMVVD bmy_14445T0/1-427 LSHTXSXLLT TGFXTHLNHE PPEETDGPPG AVALAAFLQA LEKGVSVVVD BACU008778/1-410 LSHARSVLLT TGFPTHLNHE PPEETDGPLG AVALAAFLQA LKKRVSMVVD 401 450 ENSBTAP00000053598/1-573 QRDLSVHKKL VDEATEQGVL KMSTPMLTYQ SGSVGADQVF LCRDGNPKSP ENSP00000428263/1-621 QRAWNLHQKI VEDAVEQGVL KTQIPILTYQ GGSVEAAQAF LCKNGDPQTP ENSTTRP00000012899/1-576 QRALNLYKKL VDEAVQR--- ---------- ---------- ---------- bmy_14445T0/1-427 QRALNLHKKL VDEAIQRGVL KRQIPILTYQ GRSAEAAQAF LCRDGNPKSP BACU008778/1-410 QRALNLHKKL VDEAVQR--- ---------- ---------- ---------- 451 500 ENSBTAP00000053598/1-573 RFDHLVVIEH AERAAT---Y SSRKRNVELL GDPIDDLFLG AHKIPGISST ENSP00000428263/1-621 RFDHLVAIER AGRAADGNYY NARKMNIKHL VDPIDDLFLA AKKIPGISST ENSTTRP00000012899/1-576 -FDHLVAIEC TGGAADGDYY NARKRNIKHL VDPIDGLFLA VQKSSGISTT bmy_14445T0/1-427 RFDHLVAIER TGRAADGNYY NARKRNIKHV VDPIDDLFLA VQKIPGISSP BACU008778/1-410 ---------- ---------- ---------- ---------- VQKIPGISSP 501 550 ENSBTAP00000053598/1-573 GVNDKGNKLG MDKVKEAVKR HIRNGDILAC DMEADFAV-I TGPPPWPGRS ENSP00000428263/1-621 GVGDGGNELG MGKVKEAVRR HIRHGDVIAC DVEADFAV-I AGVSNWGGYA ENSTTRP00000012899/1-576 GVGDGGNALG MGKVKEAVKR HIRNGDVIAC DVETDFAVII AGVSNWGGYA bmy_14445T0/1-427 GVGDGGNELG MGKAKEAVKR HIRNGDIISC DMETDFAV-I VG-------- BACU008778/1-410 GVGDGGNELG MGKVKEAVKR HIRNGDIIAC DVETDFAV-I AE-------- 551 600 ENSBTAP00000053598/1-573 LCLDLYFPSS CEVHRRYLGK RLGP-RPPGE QNWTRALPSL TKEEKLPGIL ENSP00000428263/1-621 LACALYILYS CAVHSQYLRK AVGPSRAPGD QAWTQALPSV IKEEKMLGIL ENSTTRP00000012899/1-576 LACALYILNS CEVHRRYLRK AVGPFRAPGE QNWTQALPSV TKEEKMLGIL bmy_14445T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU008778/1-410 ---------- ---------- ---------- ---------- ---------- 601 650 ENSBTAP00000053598/1-573 VQHGVWSRFS STLGTEVDRL LFHGTHAQMI QKLMGITLP- - ENSP00000428263/1-621 VQHKVRSGVS GIVGMEVDGL PFHNTHAEMI QKLVDVTTAQ V ENSTTRP00000012899/1-576 VQHGVRSRVS GTLGMEVDGL PFHGTHAQMI QKLVDVTMAQ G bmy_14445T0/1-427 ---------- -----E---- -FSHNRTG-- ---------- - BACU008778/1-410 ---------- -----EKKEV VLDFCPSGTI FSCVFT---- -