KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:36 2014 Check: 00 .. Name: BACU003650/1-372 Len: 550 Check: 7522 Weight: 1.00 Name: bmy_12070T0/1-545 Len: 550 Check: 215 Weight: 1.00 Name: ENSTTRP00000014205/1-381 Len: 550 Check: 7971 Weight: 1.00 Name: ENSP00000258042/1-390 Len: 550 Check: 453 Weight: 1.00 Name: ENSBTAP00000053601/1-390 Len: 550 Check: 2047 Weight: 1.00 // 1 50 BACU003650/1-372 MPPESLSNLS WTAGVNQSGF VKEVSERDFL PAPDGTTAEF VIRCVIPSLY bmy_12070T0/1-545 MAPESLSNLS RTAGVNQSGF VPEVSERDFL PAPDGTTAEF VIRCVIPSLY ENSTTRP00000014205/1-381 MPPKSLSNLS RTAGVNQRGF L----ERDFL PAPDGTTAEF VIRCVIPSLY ENSP00000258042/1-390 MPSKSLSNLS VTTGANESGS VPEGWERDFL PASDGTTTEL VIRCVIPSLY ENSBTAP00000053601/1-390 MPPESLSNLS QPAGGNRSGF VPGMSERDFL PAPDGTTAEL VIRCVIPSLY 51 100 BACU003650/1-372 LLIITVGLLG NIMLVRIFIT NSAMRSVPNI FISNLAAGDV LLLLTCVPVD bmy_12070T0/1-545 LLIITVGLLG NIMLVRIFIT NSAMRSVPNI FISNLAAGDV LLLITCVPVD ENSTTRP00000014205/1-381 LLIITVGLLG NIMLVKIFIT NSAM--VPSI FVSNLAVGDV LLLITCV-VD ENSP00000258042/1-390 LLIITVGLLG NIMLVKIFIT NSAMRSVPNI FISNLAAGDL LLLLTCVPVD ENSBTAP00000053601/1-390 LIIITVGLLG NIMLVKIFIT NSAMRSVPNI FISNLAAGDV LLLLTCVPVD 101 150 BACU003650/1-372 ASRYFFEEWM FGKVGCKLIP VIQLTSVGVS VFTLTALSAD R--------- bmy_12070T0/1-545 ASRYFFDEWM FGKVGCKLIP VIQLTSVGVS VFTLTALSAD SSCNILSKTT ENSTTRP00000014205/1-381 ASRYFFDEWM FRKVGCKLIR VIQLTSVGVS VFTLTALSTH R--------- ENSP00000258042/1-390 ASRYFFDEWM FGKVGCKLIP VIQLTSVGVS VFTLTALSAD R--------- ENSBTAP00000053601/1-390 ASRYFFDEWM FGKVGCKLIP VIQLTSVGVS VFTLTALSAD R--------- 151 200 BACU003650/1-372 ---------- ---------- ---------- ---------- ---------- bmy_12070T0/1-545 VLQKRVTLVY VYHVLRKHST DTLITMIKKG KNFHKFLELN YKLLILYIYK ENSTTRP00000014205/1-381 ---------- ---------- ---------- ---------- ---------- ENSP00000258042/1-390 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053601/1-390 ---------- ---------- ---------- ---------- ---------- 201 250 BACU003650/1-372 ---------- ---------- ---------- ---------- ----YRAIVN bmy_12070T0/1-545 DPVDENVNYI SPVEGLGMTL GASQEGEREA PLGNVLRLGA APLPYRAIVN ENSTTRP00000014205/1-381 ---------- ---------- ---------- ---------- ----YRATVN ENSP00000258042/1-390 ---------- ---------- ---------- ---------- ----YRAIVN ENSBTAP00000053601/1-390 ---------- ---------- ---------- ---------- ----YRAIVN 251 300 BACU003650/1-372 PMDIQTSGAV LWTCVKAVGI WVVSVLLAVP EAVFSQVAHI GGLDNGSFTA bmy_12070T0/1-545 PMDIQTSGAV LWTCVKAVGI WVVSVLLAVP EAVFSQVAHI GGLDNGSFTA ENSTTRP00000014205/1-381 PMGIQTSGAV LWTCVKAVGI WVVSVLLAVP EAVFSQVAHI GGLDNGSFTA ENSP00000258042/1-390 PMDMQTSGAL LRTCVKAMGI WVVSVLLAVP EAVFSEVARI SSLDNSSFTA ENSBTAP00000053601/1-390 PMDIQTSGAV LWTCVKAVGI WVVSVLLAIP EAIFSQVARV GSLDNGSFTA 301 350 BACU003650/1-372 CIPYPQTDEL HPKIHSVLIF LVYFLIPLVI ISIYYYHIAR TLIKSAHNLP bmy_12070T0/1-545 CIPYPQTDEL HPKIHSVLIF LVYFLIPLVI ISIYYYHIAR TLIKSARNLP ENSTTRP00000014205/1-381 CIPYPQTDEL HPKIHSVLLF SVYFLIPLVI ISIYYYHIAR -LIKSAHNLL ENSP00000258042/1-390 CIPYPQTDEL HPKIHSVLIF LVYFLIPLAI ISIYYYHIAK TLIKSAHNLP ENSBTAP00000053601/1-390 CIPYPQTDEL HPKIHSVLIF LVYFLIPLVI ISVYYYHIAK TLIKSAHNLP 351 400 BACU003650/1-372 GEYNEHTKK- ---------- ---------- ------QDAP ELVKQIKGTC bmy_12070T0/1-545 GEYNEHTKKQ VSSNVAASVF ILISGTISLY LQMETRKRLA KIVLVFVC-C ENSTTRP00000014205/1-381 GEYNEHTKK- ---------- ---------- -QMETQKVLA KIVLVFVC-C ENSP00000258042/1-390 GEYNEHTKK- ---------- ---------- -QMETRKRLA KIVLVFVG-C ENSBTAP00000053601/1-390 GEYNEHTKK- ---------- ---------- -QMETRKRLA KIVLVFVG-C 401 450 BACU003650/1-372 LLLCSEDFEE EPRLQLNRP- --TKLEMQWK AYLQLDEVTQ EPSECTT--- bmy_12070T0/1-545 FVFC---WFP NHILYMYRSF NYNEIDPSL- GHMIVTLVAR VLSFCSSCVN ENSTTRP00000014205/1-381 FVFC---WFP NHILYMYRSF NYNEIEPSL- GHMIVTLVAR VLSFCSSCVN ENSP00000258042/1-390 FIFC---WFP NHILYMYRSF NYNEIDPSL- GHMIVTLVAR VLSFGNSCVN ENSBTAP00000053601/1-390 FIFC---WFP NHILYMYRSF NYNKIDPSL- GHMIVTLVAR VLSFCNSCVN 451 500 BACU003650/1-372 --SLCWVGNS RRKYEGENLT IKMQNWYNIC HFRQMPEDG- ---------- bmy_12070T0/1-545 PFALYLLSES FRRHFNSQLC CGRKSYRETT KSHQAXTYSA PPQCTEDFEE ENSTTRP00000014205/1-381 PFTLHLLSES FRRHFNSQLC CGRKSYRERS SIYLLSSSA- ---------- ENSP00000258042/1-390 PFALYLLSES FRRHFNSQLC CGRKSYQERG TSYLLSSSA- ---------- ENSBTAP00000053601/1-390 PFALYLLSES FRRHFNSQLC CGRKSYGERS TSYLLSSSA- ---------- 501 550 BACU003650/1-372 ---------- ---------- ----SPICSG LYEFCKTHES SLVST----- bmy_12070T0/1-545 EPRLQLNRPT KLEMQWSMVS NKNENKVAQD VFYIGETLWY DLGKYSEAGF ENSTTRP00000014205/1-381 ---------- ---VRVTSLK KNAKNMVTKS VLLSGHNVK- EMAQ------ ENSP00000258042/1-390 ---------- ---VRMTSLK SNAKNMVTNS VLLNGHSMKQ EMAL------ ENSBTAP00000053601/1-390 ---------- ---VRMTSLK SNAKNVVTNS VLLNGHSVKQ EMAL------