KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:42 2014 Check: 00 .. Name: bmy_00922T0/1-314 Len: 631 Check: 7926 Weight: 1.00 Name: ENSP00000351520/1-616 Len: 631 Check: 1635 Weight: 1.00 Name: ENSTTRP00000011633/1-616 Len: 631 Check: 1492 Weight: 1.00 Name: BACU001973/1-615 Len: 631 Check: 8475 Weight: 1.00 Name: ENSBTAP00000053633/1-624 Len: 631 Check: 9193 Weight: 1.00 // 1 50 bmy_00922T0/1-314 -------MGR IGTSCLFPAS WHFSISPVGC PRILNTNLRQ IIVISILAAA ENSP00000351520/1-616 -------MGR IGISCLFPAS WHFSISPVGC PRILNTNLRQ IMVISVLAAA ENSTTRP00000011633/1-616 -------MGR IGISCLLPAS WHFSISPVGC PRILNTNLRQ ILVISVLAAA BACU001973/1-615 MPETGDISQR IGISCLFPAS WHFSISPVGC PRILNTNLRQ IIVISILAAA ENSBTAP00000053633/1-624 -------MGR IGISCLFPAS WHFSISPVGC PRILNTNLRQ IIVISLLAAA 51 100 bmy_00922T0/1-314 VSLLYFSVVI IRNKYGRLSR DKKFQRYLAR VTDTEATDTN NPSVHYGIVV ENSP00000351520/1-616 VSLLYFSVVI IRNKYGRLTR DKKFQRYLAR VTDIEATDTN NPNVNYGIVV ENSTTRP00000011633/1-616 VSVLYFSVVI IRNKYGRLSR DKKFQRYLAR VTDIEATDTN NPNVNYGIVV BACU001973/1-615 VSLLYFSVVI IRNKYGRLSR DKKFQRYLAR VTDTEATDTS NPNVHYGIVV ENSBTAP00000053633/1-624 VSLLYFSVVI IRNKYGRLSK DKKFQRYLAR VTDIEATDTN NPNVNYGIVV 101 150 bmy_00922T0/1-314 DCGSSGSRIF VYCWPRHNGN PHDLLDIRQM RDKNRKPVVM KIKPGISEFA ENSP00000351520/1-616 DCGSSGSRVF VYCWPRHNGN PHDLLDIRQM RDKNRKPVVM KIKPGISEFA ENSTTRP00000011633/1-616 DCGSSGSRIF VYCWPRHNGN PHDLLDIRQM RDKNRKPVVM KIKPGISEFA BACU001973/1-615 DCGSSGSRIF VYCWPRHNGN PHDLLDIRQM RDKNRKPVVM KIKPGISEFA ENSBTAP00000053633/1-624 DCGSSGSRIF VYCWPRHNGN PHDLLDIRQM RDKNRKPVVM KIKPGISEFA 151 200 bmy_00922T0/1-314 TSPEKVSDYI SPLLNFAAEH VPRAKHKETP LYILCTAGMR ILPESQQKAI ENSP00000351520/1-616 TSPEKVSDYI SPLLNFAAEH VPRAKHKETP LYILCTAGMR ILPESQQKAI ENSTTRP00000011633/1-616 TSPEKVSDYI SPLLNFAAEH VPRAKHKETP LYILCTAGMR ILPESQQKAI BACU001973/1-615 TSPEKVSDYI SPLLNFAAEH VPRAKHKETP LYILCTAGMR ILPESQQKAI ENSBTAP00000053633/1-624 TSPEKVSDYI SPLLNFAAEH VPRAKHKETP LYILCTAGMR ILPESQQKAI 201 250 bmy_00922T0/1-314 LEDLLTDIPV HFDFLFSDSH AEVISGKQEG VYAWIGINFV LGRFEHIEDD ENSP00000351520/1-616 LEDLLTDIPV HFDFLFSDSH AEVISGKQEG VYAWIGINFV LGRFEHIEDD ENSTTRP00000011633/1-616 LEDLLTDIPV HFDFLFSDSH AEVISGKQEG VYAWIGINFV LGRFEHIEDD BACU001973/1-615 LEDLLTDIPV HFDFLFSDSH AEVISGKQEG VYAWIGINFV LGRFEHIEDD ENSBTAP00000053633/1-624 LEDLLTDIPV HFDFLFSDSH AEVISGKQEG VYAWIGINFV LGRFEHIEDD 251 300 bmy_00922T0/1-314 DEAVVEVNIP GSESSKAILR KRTAGILDMG GVSTQIAYEV PKT------- ENSP00000351520/1-616 DEAVVEVNIP GSESSEAIVR KRTAGILDMG GVSTQIAYEV PKTVSFASSQ ENSTTRP00000011633/1-616 DEAVVEVNIP GSESSKAILR KRTAGILDMG GVSTQIAYEV PKTVSFASSQ BACU001973/1-615 DEAVVEVNIP GSESSKAILR KRTAGILDMG GVSTQIAYEV PKT------- ENSBTAP00000053633/1-624 DEAVVEVNIP GSESSEAILR KRTAGILDMG GVSTQIAYEV PKTVSFASSQ 301 350 bmy_00922T0/1-314 ---------- ---------- ---------- ---------- ----SERV-- ENSP00000351520/1-616 QEEVAKNLLA EFNLGCDVHQ TEHVYRVYVA TFLGFGGNAA RQRYEDRIFA ENSTTRP00000011633/1-616 QEEVAKNLLA EFNLGCDVHQ TEHVYRVYVA TFLGFGGNAA RQRYEDRIFT BACU001973/1-615 -EEVAKNLLA EFNLGCDVHQ TEHVYRVYVA TFLGFGGNAA RQRYEDRIFA ENSBTAP00000053633/1-624 QEEVAKNLLA EFNLGCDIHQ TEHVYRVYVA TFLGFGGNAA RQRYEDRIFA 351 400 bmy_00922T0/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000351520/1-616 NTIQKNRLLG KQTGLTPDMP YLDPCLPLDI KDEIQQNGQT IYLRGTGDFD ENSTTRP00000011633/1-616 STVQKNRLLG KQTGLTPDTP YLDPCLPLDI KDEIQQNGQT LYLRGTGAFD BACU001973/1-615 STVQKNRLLG KQTGLTPDTP YLDPCLPLDI KDEIQQNGQT LYLRGTGDFD ENSBTAP00000053633/1-624 STVQKNRLLG KQTGLTPDTP YLDPCLPLDI KDEIQQNGQT LYLRGTGDFD 401 450 bmy_00922T0/1-314 ---------- ---------- ---------- ---------- ---CT--VLA ENSP00000351520/1-616 LCRETIQPFM NKTNETQTSL NGVYQPPIHF QNSEFYGFSE FYYCTEDVLR ENSTTRP00000011633/1-616 LCRETIQPFM NKTNETQTSL NGVYQPPIHF QNSEFYGFSE FYYCTEDVLR BACU001973/1-615 LCRETIQPFM NKTNETQTSL NGVYQPPIHF QNSEFYGFSE FYYCTEDVLR ENSBTAP00000053633/1-624 LCRETIQPFM NKTNETQTSL NGVYQPPIHF QNSEFYGFSE FYYCTEDVLR 451 500 bmy_00922T0/1-314 EGTAFSAQ-- ---------- ---------E KG-------- ---------- ENSP00000351520/1-616 MGGDYNAAKF TKAAKDYCAT KWSILRERFD RGLYASHADL ------HRLK ENSTTRP00000011633/1-616 MGGDYSAAAF TRAAKDYCAT KWSILRERFD RGLYASHADL ------HRLK BACU001973/1-615 MGGDYSAAAF TRAAKDYCAT KWSILRERFD RGLYASHADL ------HRLK ENSBTAP00000053633/1-624 MGGDYDATAF TRAAKDYCAT KWSILRERFD RGLYASHADL TGSSRPHRLK 501 550 bmy_00922T0/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000351520/1-616 YQCFKSAWMF EVFHRGFSFP VNYKSLKTAL QVYDKEVQWT LGAILYRTRF ENSTTRP00000011633/1-616 YQCFKSAWMF EVFHRGFSFP VNYKNLKTAL QVYDKEVQWT LGAILYRTRF BACU001973/1-615 YQCFKSAWMF EVFHRGFSFP VNYRNLKTAL QVYDKEVQWT LGAILYRTRF ENSBTAP00000053633/1-624 YQCFKSAWMF EVFHRGFSFP VNYRNLKTAL QVYDKEVQWT LGAILYRTRF 551 600 bmy_00922T0/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000351520/1-616 LPL--RDIQQ EAFRASHTHW RGVSFVYNHY LFSGCFLVVL LAILLYLLRL ENSTTRP00000011633/1-616 LPL--RDIQQ ETFRASHAHW RGFSFVYNHY LFSGCFLVVL LAILLYLLRL BACU001973/1-615 LPL--RDIQQ ETFRASHAHW RGFSFVYNHY LFSGCFLVVL LAILLYLLRL ENSBTAP00000053633/1-624 LPLRGRDIQQ ETFRASHAHW RGFSFVYNHY LFSGCFLVVL LAILLYLLRL 601 650 bmy_00922T0/1-314 ---DRRKPRK K--------- ---------- - ENSP00000351520/1-616 RRIHRRTPRS SSAAALWMEE GLPAQNAPGT L ENSTTRP00000011633/1-616 RRIHRRAPRS GSAATVWLED GLPSQKIAST L BACU001973/1-615 RRIHRRAPRS GPATAVWLED GLPSQKIAGT L ENSBTAP00000053633/1-624 RRIHRRAPRS GSAAAVWLEE GLPSQKIAGT L