KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:48 2014 Check: 00 .. Name: ENSTTRP00000005888/1-1100 Len: 1134 Check: 7544 Weight: 1.00 Name: bmy_08688T0/1-1044 Len: 1134 Check: 9972 Weight: 1.00 Name: BACU001320/1-967 Len: 1134 Check: 7696 Weight: 1.00 Name: ENSP00000211998/1-1134 Len: 1134 Check: 5090 Weight: 1.00 Name: ENSBTAP00000053644/1-1134 Len: 1134 Check: 6199 Weight: 1.00 // 1 50 ENSTTRP00000005888/1-1100 ---------- ---------- ---------- ----KAIPDL TAPVAAVQAA bmy_08688T0/1-1044 MPVFHTRTIE SILEPVAQQI SHLVIMHEEG EVDGKAIPDL TAPVAAVQAA BACU001320/1-967 ---------- ---------- ---------- ---------- ---------- ENSP00000211998/1-1134 MPVFHTRTIE SILEPVAQQI SHLVIMHEEG EVDGKAIPDL TAPVAAVQAA ENSBTAP00000053644/1-1134 MPVFHTRTIE SILEPVAQQI SHLVIMHEEG EVDGKAIPDL TAPVAAVQAA 51 100 ENSTTRP00000005888/1-1100 VSNLVRVGKE TVQTTEDQIL KRDMPPAFIK VENACTKLVQ AAQMLQSDPY bmy_08688T0/1-1044 VSNLVRVGKE TVQTTEDQIL KRDMPPAFIK VENACTKLVQ AAQMLQSDPY BACU001320/1-967 ---------- ---------- ---------- ---------- ---------- ENSP00000211998/1-1134 VSNLVRVGKE TVQTTEDQIL KRDMPPAFIK VENACTKLVQ AAQMLQSDPY ENSBTAP00000053644/1-1134 VSNLVRVGKE TVQTTEDQIL KRDMPPAFIK VENACTKLVQ AAQMLQSDPY 101 150 ENSTTRP00000005888/1-1100 SVPARDYLID GSRGILSGTS DLLLTFDEAE VRKIIRVCKG ILEYLTVAEV bmy_08688T0/1-1044 SVPARDYLID GSRGILSGTS DLLLTFDEAE VRKIIRVCKG ILEYLTVAEV BACU001320/1-967 ---------- ---------- ---------- ---------- ---------- ENSP00000211998/1-1134 SVPARDYLID GSRGILSGTS DLLLTFDEAE VRKIIRVCKG ILEYLTVAEV ENSBTAP00000053644/1-1134 SVPARDYLID GSRGILSGTS DLLLTFDEAE VRKIIRVCKG ILEYLTVAEV 151 200 ENSTTRP00000005888/1-1100 VETMEDLVTY TKNLGPGMTK MAKMIDERQQ ELTHQEHRVM LVNSMNTVKE bmy_08688T0/1-1044 VETMEDLVTY TKNLGPGMTK MAKMIDERQQ ELTHQEHRVM LVNSMNTVKE BACU001320/1-967 ---------- -------MTK MAKMIDERQQ ELTHQEHRVM LVNSMNTVKE ENSP00000211998/1-1134 VETMEDLVTY TKNLGPGMTK MAKMIDERQQ ELTHQEHRVM LVNSMNTVKE ENSBTAP00000053644/1-1134 VETMEDLVTY TKNLGPGMTK MAKMIDERQQ ELTHQEHRVM LVNSMNTVKE 201 250 ENSTTRP00000005888/1-1100 LLPVLISXXX XXXXXXXXXX XXXXXXXXNR NFTVEKMSAE INEIIRVLQL bmy_08688T0/1-1044 LLPVLISAMK IFVTTKNSKN QGIEEALKNR NFTVEKMSAE INEIIRVLQL BACU001320/1-967 LLPVLISAMK IFVTTKNSKN QGIEEALKNR NFTVEKMSAE INEIIRVLQL ENSP00000211998/1-1134 LLPVLISAMK IFVTTKNSKN QGIEEALKNR NFTVEKMSAE INEIIRVLQL ENSBTAP00000053644/1-1134 LLPVLISAMK IFVTTKNSKN QGIEEALKNR NFTVEKMSAE INEIIRVLQL 251 300 ENSTTRP00000005888/1-1100 TSWDEDAWAS KDTEAMKRAL ASIDSKLNQA KGWLRDPSAS PGDAGEQAIR bmy_08688T0/1-1044 TSWDEDAWAS KDTEAMKRAL ASIDSKLNQA KGWLRDPSAS P--------- BACU001320/1-967 TSWDEDAWAS KDTEAMKRAL ASIDSKLNQA KGWLRDPSAS PGDAGEQAIR ENSP00000211998/1-1134 TSWDEDAWAS KDTEAMKRAL ASIDSKLNQA KGWLRDPSAS PGDAGEQAIR ENSBTAP00000053644/1-1134 TSWDEDAWAS KDTEAMKRAL ASIDSKLNQA KGWLRDPNAS PGDAGEQAIR 301 350 ENSTTRP00000005888/1-1100 QILDEAGKVG ELCAGKERRE ILGTCKMLGQ MTDQVADLRA RGQGASPVAM bmy_08688T0/1-1044 ---DEAGKVG ELCAGKERRE ILGTCKMLGQ MTDQVADLRA RGQGASPVAM BACU001320/1-967 QILDEAGKVG ELCAGKERRE ILGTCKMLGQ MTDQVADLRA RGQGASPVAM ENSP00000211998/1-1134 QILDEAGKVG ELCAGKERRE ILGTCKMLGQ MTDQVADLRA RGQGSSPVAM ENSBTAP00000053644/1-1134 QILDEAGKVG ELCAGKERRE ILGTCKMLGQ MTDQVADLRA RGQGASPVAM 351 400 ENSTTRP00000005888/1-1100 QKAQQVSQGL DVLTAKVENA ARKLEAMTNS KQSIAKKIDA AQNWLADPNG bmy_08688T0/1-1044 QKAQQVSQGL DVLTAKVENA ARKLEAMTNS KQSIAKKIDA AQNWLADPNG BACU001320/1-967 QKAQQVSQGL DVLTAKVENA ARKLEAMTNS KQSIAKKIDA AQNWLADPNG ENSP00000211998/1-1134 QKAQQVSQGL DVLTAKVENA ARKLEAMTNS KQSIAKKIDA AQNWLADPNG ENSBTAP00000053644/1-1134 QKAQQVSQGL DVLTAKVENA ARKLEAMTNS KQSIAKKIDA AQNWLADPNG 401 450 ENSTTRP00000005888/1-1100 GPEGEEQIRG ALAEARKIAE LCDDPKERDD ILRSLGEISA LTSKLADLRR bmy_08688T0/1-1044 GPEGEEQIRG ALAEARKIAE LCDDPKERED ILRSLGEISA LTSKLADLRR BACU001320/1-967 GPEGEEQIRG ALAEARKIAE LCDDPKERDD ILRSLGEISA LTSKLADLRR ENSP00000211998/1-1134 GPEGEEQIRG ALAEARKIAE LCDDPKERDD ILRSLGEISA LTSKLADLRR ENSBTAP00000053644/1-1134 GPEGEEQIRG ALAEARKIAE LCDDPKERDD ILRSLGEISA LTSKLGDLRR 451 500 ENSTTRP00000005888/1-1100 QGKGDSPEAR ALAKQVATAL QNLQTKTNKA VANSRPAKAA VHLEGKIEQA bmy_08688T0/1-1044 QGKGDSPEAR ALAKQVATAL QNLQTKTNKA VANSRPAKAA VHLEGKIEQA BACU001320/1-967 QGKGDSPEAR ALAKQVATAL QNLQTKTNKA VANSRPAKAA VHLEGKIEQA ENSP00000211998/1-1134 QGKGDSPEAR ALAKQVATAL QNLQTKTNRA VANSRPAKAA VHLEGKIEQA ENSBTAP00000053644/1-1134 QGKGDSPEAR ALAKQVATAL QNLQTKTNRA VANSRPAKAA VHLEGKIEQA 501 550 ENSTTRP00000005888/1-1100 QRWIDNPTVD DRGVGQAAIR GLVAEGHRLA NVMMGPYRQD LLAKCDRVDQ bmy_08688T0/1-1044 QRWIDNPTVD DRGVGQAAIR GLVAEGHRLA NVMMGPYRQD LLAKCDRVDQ BACU001320/1-967 QRWIDNPTVD DRGVGQAAIR GLVAEGHRLA NVMMGPYRQD LLAKCDRVDQ ENSP00000211998/1-1134 QRWIDNPTVD DRGVGQAAIR GLVAEGHRLA NVMMGPYRQD LLAKCDRVDQ ENSBTAP00000053644/1-1134 QRWIDNPTVD DRGVGQAAIR GLVAEGHRLA NVMMGPYRQD LLAKCDRVDQ 551 600 ENSTTRP00000005888/1-1100 LTAQLADLAA RGEGESPQAR ALASQLQDSL KDLKARMQEA MTQEVSDVFS bmy_08688T0/1-1044 LTAQLADLAA RGEGESPQAR ALASQLQDSL K--------- ---------- BACU001320/1-967 LTAQLADLAA RGEGESPQAR ALASQLQDSL KDLKARMQEA MTQEVSDVFS ENSP00000211998/1-1134 LTAQLADLAA RGEGESPQAR ALASQLQDSL KDLKARMQEA MTQEVSDVFS ENSBTAP00000053644/1-1134 LTAQLADLAA RGEGESPQAR ALASQLQDSL KDLKARMQEA MTQEVSDVFS 601 650 ENSTTRP00000005888/1-1100 DTTTPIKLLA VAATAPPDAP NREEXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08688T0/1-1044 ---------- ---------- ----VFDERA ANFENHSGRL GATAEKAAAV BACU001320/1-967 DTTTPIKLLA VAATAPPDAP NREEVFDERA ANFENHSGRL GATAEKAAAV ENSP00000211998/1-1134 DTTTPIKLLA VAATAPPDAP NREEVFDERA ANFENHSGKL GATAEKAAAV ENSBTAP00000053644/1-1134 DTTTPIKLLA VAATAPPDAP NREEVFDERA ANFENHSGRL GATAEKAAAV 651 700 ENSTTRP00000005888/1-1100 XXXXXXXXEG IQASVKTARE LTPQVVSAAR ILLRNPGNQA AYEHFETMKN bmy_08688T0/1-1044 GTANKSTVEG IQASVKTARE LTPQVVSAAR ILLRNPGNQA AYEHFETMKN BACU001320/1-967 GTANKSTVEG IQASVKTARE LTPQVISAAR ILLRNPGNQA AYEHFETMKN ENSP00000211998/1-1134 GTANKSTVEG IQASVKTARE LTPQVVSAAR ILLRNPGNQA AYEHFETMKN ENSBTAP00000053644/1-1134 GTANKSTVEG IQASVKTARE LTPQVVSAAR ILLRNPGNQA AYEHFETMKN 701 750 ENSTTRP00000005888/1-1100 QWIDNVEKMT GLVDEAIDTK SLLDASEEAI KKDLDKCKVA MANIQPQMLV bmy_08688T0/1-1044 QWIDNVEKMT GLVDEAIDTK SLLDASEEAI KKDLDKCKVA MANIQPQMLV BACU001320/1-967 QWIDNVEKMT GLVDEAIDTK SLLDASEEAI KKDLDKCKVA MANIQPQMLV ENSP00000211998/1-1134 QWIDNVEKMT GLVDEAIDTK SLLDASEEAI KKDLDKCKVA MANIQPQMLV ENSBTAP00000053644/1-1134 QWIDNVEKMT GLVDEAIDTK SLLDASEEAI KKDLDKCKVA MANIQPQMLV 751 800 ENSTTRP00000005888/1-1100 AGATSIARRA NRILLVAKRE VENSEDPKFR EAVKAASDEL SKTISPMVVD bmy_08688T0/1-1044 AGATSIARRA NRILLVAKRE VENSEDPKFR EAVKAASDEL SKTISPMVVD BACU001320/1-967 AGATSIARRA NRILLVAKRE VENSEDPKFR EAVKAASDEL SKTISPMVVD ENSP00000211998/1-1134 AGATSIARRA NRILLVAKRE VENSEDPKFR EAVKAASDEL SKTISPMVMD ENSBTAP00000053644/1-1134 AGATSIARRA NRILLVAKRE VENSEDPKFR EAVKAASDEL SKTISPMVVD 801 850 ENSTTRP00000005888/1-1100 AKAVAGNISD PXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08688T0/1-1044 AKAVAGNISD PGLQKSFLDS GYRILGAVAK VREAFQPQEP DFPPPPPDLE BACU001320/1-967 AKAVAGNISD PGLQKSFLDS GYRILGAVAK VREAFQPQEP DFPPPPPDLE ENSP00000211998/1-1134 AKAVAGNISD PGLQKSFLDS GYRILGAVAK VREAFQPQEP DFPPPPPDLE ENSBTAP00000053644/1-1134 AKAVAGNISD PGLQKSFLDS GYRILGAVAK VREAFQPQEP DFPPPPPDLE 851 900 ENSTTRP00000005888/1-1100 XXXLTDELAP PKPPLPEGEV PPPRPPPPEE KDEEFPEQKA GEVINQPMMM bmy_08688T0/1-1044 QLRLTDELAP PKPPLPEGEV PPPRPPPPEE KDEEFPEQKA GEVINQPMMM BACU001320/1-967 QLRLTDELAP PKPPLPEGEV PPPRPPPPEE KDEEFPEQKA GEVINQPMMM ENSP00000211998/1-1134 QLRLTDELAP PKPPLPEGEV PPPRPPPPEE KDEEFPEQKA GEVINQPMMM ENSBTAP00000053644/1-1134 QLRLTDELAP PKPPLPEGEV PPPRPPPPEE KDEEFPEQKA GEVINQPMMM 901 950 ENSTTRP00000005888/1-1100 AARQLHDEAR KWSSKPGNPA AKVGISAVAE ADAADAVGSP VPPDMEDDYE bmy_08688T0/1-1044 AARQLHDEAR KWSSKPGNPA AEVGVSAVAE ADAAAAVGSP VPPDMEDDYE BACU001320/1-967 AARQLHDEAR KWSSKPGNPA AEVGVSAVAE ADAAAAVGSP VPPDMEDDYE ENSP00000211998/1-1134 AARQLHDEAR KWSSKPGIPA AEVGIGVVAE ADAADAAGFP VPPDMEDDYE ENSBTAP00000053644/1-1134 AARQLHDEAR KWSSKPGNPA AKVGISVVAE AEAADAVGFP VPPDMEDDYE 951 1000 ENSTTRP00000005888/1-1100 PELLLMPSSQ PVNQPILAAA QSLHREATKW SSKGNDIIAA AKRMALLMAE bmy_08688T0/1-1044 PELLLVPSSQ PVNQPILAAA QSLHREATKW SSKGNDIIAA AKRMALLMAE BACU001320/1-967 PELLLVPSSQ PVNQPILAAA QSLHREATKW SSKGNDIIAA AKRMALLMAE ENSP00000211998/1-1134 PELLLMPSNQ PVNQPILAAA QSLHREATKW SSKGNDIIAA AKRMALLMAE ENSBTAP00000053644/1-1134 PELLLMPSNQ PVNQPILAAA QSLHREATKW SSKGNDIIAA AKRMALLMAE 1001 1050 ENSTTRP00000005888/1-1100 MSRLVRGGSG TKRALIQCAK DIAKASDEVT RLAKEVAKQC TDKRIRTNLL bmy_08688T0/1-1044 MSRLVRGGSG TKRALIQCAK DIAKASDEVT RLAKEVAKQC TDKRIRTNLL BACU001320/1-967 MSRLVRGGSG TKRALIQCAK DIAKASDEVT RLAKEVAKQC TDKRIRTNLL ENSP00000211998/1-1134 MSRLVRGGSG TKRALIQCAK DIAKASDEVT RLAKEVAKQC TDKRIRTNLL ENSBTAP00000053644/1-1134 MSRLVRGGSG TKRALIQCAK DIAKASDEVT RLAKEVAKQC TDKRIRTNLL 1051 1100 ENSTTRP00000005888/1-1100 QVCERIPTIS TQLKILSTVK ATMLGRTNIS DEESEQATEM LVHNAQNLMQ bmy_08688T0/1-1044 ---------- ---------- ---------- -----QATEM LVHNAQNLMQ BACU001320/1-967 QVCERIPTIS TQLKILSTVK ATMLGRTNIS DEESEQATEM LVHNAQNLMQ ENSP00000211998/1-1134 QVCERIPTIS TQLKILSTVK ATMLGRTNIS DEESEQATEM LVHNAQNLMQ ENSBTAP00000053644/1-1134 QVCERIPTIS TQLKILSTVK ATMLGRTNIS DEESEQATEM LVHNAQNLMQ 1101 1150 ENSTTRP00000005888/1-1100 SVKETVREAE AASIKIRTDA GFTLRWVRKT PWYQ bmy_08688T0/1-1044 SVKETVREAE AASIKIRTDA GFTLRWVRKT PWYQ BACU001320/1-967 SVKETVREAE AASIKIRTDA GFTLRWVRKT PWYQ ENSP00000211998/1-1134 SVKETVREAE AASIKIRTDA GFTLRWVRKT PWYQ ENSBTAP00000053644/1-1134 SVKETVREAE AASIKIRTDA GFTLRWVRKT PWYQ