KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:07:49 2014 Check: 00 .. Name: bmy_02190T0/1-1140 Len: 1218 Check: 3672 Weight: 1.00 Name: BACU010024/1-998 Len: 1218 Check: 2883 Weight: 1.00 Name: ENSP00000454157/1-1214 Len: 1218 Check: 1204 Weight: 1.00 Name: ENSTTRP00000006127/1-1215 Len: 1218 Check: 700 Weight: 1.00 Name: ENSBTAP00000053646/1-1209 Len: 1218 Check: 8563 Weight: 1.00 // 1 50 bmy_02190T0/1-1140 MAENVKGD-- ---------- EAKDGVGYQK SCE-GIALDG TEKLGW---- BACU010024/1-998 MLFLLTISGQ NYK------- QDFAVVNYDN VVDTGSETDE EDKLQIAEED ENSP00000454157/1-1214 MKQPIMADGP RCKRRKQANP RRKNVVNYDN VVDTGSETDE EDKLHIAEDD ENSTTRP00000006127/1-1215 MKQPIMADGP RCKRRKQANP RRKNVVNYDN VVDTGSETDE EDKLQIAEED ENSBTAP00000053646/1-1209 -----MADGP RCKRRKQANP RRKNVVNYDN VVDTGSETDE EDKPQIAEED 51 100 bmy_02190T0/1-1140 ---------- ---------- -------ILV SQGQNDTRTR GG-------- BACU010024/1-998 GIANPLDQER SPASVPNHES SPHRSQALLP REEEEDEIRE GGVEHTWHNN ENSP00000454157/1-1214 GIANPLDQET SPASVPNHES SPHVSQALLP REEEEDEIRE GGVEHPWHNN ENSTTRP00000006127/1-1215 GIANPLDQER SPASVPNHES SPHGSQALLP REEEEDEIRE GGVEHTWHNN ENSBTAP00000053646/1-1209 GIANPLDQER SPASVPNHES SPHVSQALLP REEEEDEIRE GGVEHAWHNS 101 150 bmy_02190T0/1-1140 -------DGS DFQLQ----- ---------- ----VKNANC TSDFEEYFAK BACU010024/1-998 DILPASVDGP ---------- ---------- ----VKNANC TSDFEEYFAK ENSP00000454157/1-1214 EILQASVDGP EEMKEDYDTM GPEATIQTAI NNGTVKNANC TSDFEEYFAK ENSTTRP00000006127/1-1215 DILPASVDGP EEMKEDYDTM GPEAMIQTTV NNGTVKNANC TSDFEEYFAK ENSBTAP00000053646/1-1209 DILQASVDGP EEMKEDYDTM GPEATIQTTV NNGTVKNANC TSDFEEYFAK 151 200 bmy_02190T0/1-1140 RKLEERDGHA VSIEEYLQRS DTAIIYPEAP EELSRLGTPE ANGQEENDLP BACU010024/1-998 RKLEERDGHA VSIEEYLQRS DTAIIYPEAP EELSRLGTPE ANGQEENDLP ENSP00000454157/1-1214 RKLEERDGHA VSIEEYLQRS DTAIIYPEAP EELSRLGTPE ANGQEENDLP ENSTTRP00000006127/1-1215 RKLEERDGHA VSIEEYLQRS DTAIIYPEAP EELSRLGTPE ANGQEENDLP ENSBTAP00000053646/1-1209 RKLEERDGHA VSIEEYLQRS DTAIIYPEAP EELSRLGTPE ANGQEENDLP 201 250 bmy_02190T0/1-1140 PGTPDAFAQL LTCPYCDRGY KRLTSLKEHI KYRHEKNEEN FSCPLCSYTF BACU010024/1-998 PGTPDAFAQL LTCPYCDRGY KRLTSLKEHI KYRHEKNEEN FSCPLCSYTF ENSP00000454157/1-1214 PGTPDAFAQL LTCPYCDRGY KRLTSLKEHI KYRHEKNEEN FSCPLCSYTF ENSTTRP00000006127/1-1215 PGTPDAFAQL LTCPYCDRGY KRLTSLKEHI KYRHEKNEEN FSCPLCSYTF ENSBTAP00000053646/1-1209 PGTPDAFAQL LTCPYCDRGY KRLTSLKEHI KYRHEKNEEN FSCPLCSYTF 251 300 bmy_02190T0/1-1140 AYRTQLERHM VTHKPGTDQH QMLTQGAGNR KFKCTECGKA FKYKHHLKEH BACU010024/1-998 AYRTQLERHM VTHKPGTDQH QMLTQGAGNR KFKCTECGKA FKYKHHLKEH ENSP00000454157/1-1214 AYRTQLERHM VTHKPGTDQH QMLTQGAGNR KFKCTECGKA FKYKHHLKEH ENSTTRP00000006127/1-1215 AYRTQLERHM VTHKPGTDQH QMLTQGAGNR KFKCTECGKA FKYKHHLKEH ENSBTAP00000053646/1-1209 AYRTQLERHM VTHKPGTDQH QMLTQGAGNR KFKCTECGKA FKYKHHLKEH 301 350 bmy_02190T0/1-1140 LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCIGLISV NGRMRNNIKT BACU010024/1-998 LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCIGLISV NGRMRNNIKT ENSP00000454157/1-1214 LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCIGLISV NGRMRNNIKT ENSTTRP00000006127/1-1215 LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCIGLISV NGRMRNNIKT ENSBTAP00000053646/1-1209 LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCIGLISV NGRMRNNIKT 351 400 bmy_02190T0/1-1140 GSSPNSVSSS PTNSAITQLR NKLENGKPLS MSEPTGLLKI KTEPLDFNDY BACU010024/1-998 GSSPNSVSSS PTNSAITQLR NKLENGKPLS MSEPTGLLKI KTEPLDFNDY ENSP00000454157/1-1214 GSSPNSVSSS PTNSAITQLR NKLENGKPLS MSEQTGLLKI KTEPLDFNDY ENSTTRP00000006127/1-1215 GSSPNSVSSS PTNSAITQLR NKLENGKPLS MSEPTGLLKI KTEPLDFNDY ENSBTAP00000053646/1-1209 GSSPNSVSSS PTNSAITQLR NKLENGKPLS MSEQTGLLKI KTEPLDFNDY 401 450 bmy_02190T0/1-1140 NKVLMATHGF SGTSPFMNGA LGATSPLGVH PSAQSPMQHL GVGMEAPLLG BACU010024/1-998 NKVLMATHGF SGTSPFMNGA LGATSPLGVH PSAQSPMQHL GVGMEAPLLG ENSP00000454157/1-1214 -KVLMATHGF SGTSPFMNGG LGATSPLGVH PSAQSPMQHL GVGMEAPLLG ENSTTRP00000006127/1-1215 NKVLMATHGF SGTSPFMNGA LGATSPLGVH PSAQSPMQHL GVGMEAPLLG ENSBTAP00000053646/1-1209 -KVLMATHGF SGTSPFMNGA LGATSPLGVH PSAQSPMQHL GVGMEAPLLG 451 500 bmy_02190T0/1-1140 FHTMNSNLSE VQKVLQIVDN TVSRQKMDCK AEEISKLKGY HMKDPCSQPE BACU010024/1-998 FHTMNSNLSE VQKVLQIVDN TVSRQKMDCK AEEISKLKGY HMKDPCSQPE ENSP00000454157/1-1214 FPTMNSNLSE VQKVLQIVDN TVSRQKMDCK AEEISKLKGY HMKDPCSQPE ENSTTRP00000006127/1-1215 FHTMNSNLSE VQKVLQIVDN TVSRQKMDCK AEEISKLKGY HMKDPCSQPE ENSBTAP00000053646/1-1209 FPTMNSNLSE VQKVLQIVDN TVSRQKMDCK AEEISKLKGY HMKDPCSQPE 501 550 bmy_02190T0/1-1140 EQGVTSPNIP PVGLPVVSHN GATKSIIDYT LEKVNEAKAC LQSLTTDSRR BACU010024/1-998 EQGVTSPNIP PVGLPVVSHN GATKSIIDYT LEKVNEAKAC LQSLTTDSRR ENSP00000454157/1-1214 EQGVTSPNIP PVGLPVVSHN GATKSIIDYT LEKVNEAKAC LQSLTTDSRR ENSTTRP00000006127/1-1215 EQGVTSPNIP PVGLPVVSHN GATKSIIDYT LEKVNEAKAC LQSLTTDSRR ENSBTAP00000053646/1-1209 EQGVTSPNIP PVGLPVVSHN GATKSIIDYT LEKVNEAKAC LQSLTTDSRR 551 600 bmy_02190T0/1-1140 QISNIKKEKL RTLIDLVTDD KMIENHNIST PFSCQFCKES FPGPIPLHQH BACU010024/1-998 QISNIKKEKL RTLIDLVTDD KMIENHNIST PFSCQFCKES FPGPIPLHQH ENSP00000454157/1-1214 QISNIKKEKL RTLIDLVTDD KMIENHNIST PFSCQFCKES FPGPIPLHQH ENSTTRP00000006127/1-1215 QISNIKKEKL RTLIDLVTDD KMIENHNIST PFSCQFCKES FPGPIPLHQH ENSBTAP00000053646/1-1209 QISNIKKEKL RTLIDLVTDD KMIENHNIST PFSCQFCKES FPGPIPLHQH 601 650 bmy_02190T0/1-1140 ERYLCKMNEE IKAVLQPHEN IVPNKAGVFV DNKALLLSSV LSEKGMTSPI BACU010024/1-998 ERYLCKMNEE IKAVLQPHEN IVPNKAGVFV DNKALLLSSV LSEKGMTSPI ENSP00000454157/1-1214 ERYLCKMNEE IKAVLQPHEN IVPNKAGVFV DNKALLLSSV LSEKGMTSPI ENSTTRP00000006127/1-1215 ERYLCKMNEE IKAVLQPHEN IVPNKAGVFV DNKALLLSSV LSEKGMTSPI ENSBTAP00000053646/1-1209 ERYLCKMNEE IKAVLQPHEN IVPNKAGVFV DNKALLLSSV LSEKGMTSPI 651 700 bmy_02190T0/1-1140 NPYKDHMSVL KAYYAMNMEP NSDELLKISI AVGLPQEFVK EWFEQRKVYQ BACU010024/1-998 NPYKDHMSVL KAYYAMNMEP NSDELLKISI AVGLPQEFVK EWFEQRKVYQ ENSP00000454157/1-1214 NPYKDHMSVL KAYYAMNMEP NSDELLKISI AVGLPQEFVK EWFEQRKVYQ ENSTTRP00000006127/1-1215 NPYKDHMSVL KAYYAMNMEP NSDELLKISI AVGLPQEFVK EWFEQRKVYQ ENSBTAP00000053646/1-1209 NPYKDHMSVL KAYYAMNMEP NSDELLKISI AVGLPQEFVK EWFEQRKVYQ 701 750 bmy_02190T0/1-1140 YSNSRSPSLE RNSKPLVPNS NPPTKDSLLP RSPVKPMDSI TSPSIAELHN BACU010024/1-998 YSNSRSPSLE RNSKPLVPNS NPPTKDSLLP RSPVKPMDSI TSPSIAELHN ENSP00000454157/1-1214 YSNSRSPSLE RSSKPLAPNS NPPTKDSLLP RSPVKPMDSI TSPSIAELHN ENSTTRP00000006127/1-1215 YSNSRSPSLE RNSKPLAPNS NPPTKDSLLP RSPVKPMDSI TSPSIAELHN ENSBTAP00000053646/1-1209 YSNSRSPSLE RNSKPLAPNS NPPTKDSLLP RSPVKPMDSI TSPSIAELHN 751 800 bmy_02190T0/1-1140 SVTNCDPPLR LTKPSHFTNI KPVEKLDHSR SNTPSPLNLS STSSKNSHSS BACU010024/1-998 SVTNCDPPLR LTKPSHFTNI KPVEKLDHSR SNTPSPLNLS STSSKNSHSS ENSP00000454157/1-1214 SVTNCDPPLR LTKPSHFTNI KPVEKLDHSR SNTPSPLNLS STSSKNSHSS ENSTTRP00000006127/1-1215 SVTNCDPPLR LTKPSHFTNI KPVEKLDHSR SNTPSPLNLS STSSKNSHSS ENSBTAP00000053646/1-1209 SVTNCDPPLR LTKPSHFTNI KPVEKLDHSR SNTPSPLNLS STSSKNSHSS 801 850 bmy_02190T0/1-1140 SYTPNSFSSE ELQAEPLDLS LPKQMKEPKS IIATKNKTKV GSINLDHNSV BACU010024/1-998 SYTPNSFSSE ELQAEPLDLS LPKQMKEPKS IIATKNKTKV GSINLDHNSV ENSP00000454157/1-1214 SYTPNSFSSE ELQAEPLDLS LPKQMKEPKS IIATKNKTKA SSISLDHNSV ENSTTRP00000006127/1-1215 SYTPNSFSSE ELQAEPLDLS LPKQMKEPKS IIATKNKTKV GSINLDHNSV ENSBTAP00000053646/1-1209 SYTPNSFSSE ELQAEPLDLS LPKQMKEPKS IIATKSKTKV GSINLDHNSV 851 900 bmy_02190T0/1-1140 SSSSENSDEP LNLTFIKKEF SNSNNLDNKS ANPVFGMNPF SAKPLYTALP BACU010024/1-998 SSSSENSDEP LNLTFIKKEF SNSNNLDNKS ANPVFGMNPF SAKPLYTALP ENSP00000454157/1-1214 SSSSENSDEP LNLTFIKKEF SNSNNLDNKS TNPVFSMNPF SAKPLYTALP ENSTTRP00000006127/1-1215 SSSSENSDEP LNLTFIKKEF SNSNNLDNKS ANPVFGMNPF SAKPLYTALP ENSBTAP00000053646/1-1209 SSSSENSDEP LNLTFIKKEF SNSNNLDSKS ANPVFGMNPF SAKPLYTALP 901 950 bmy_02190T0/1-1140 PQSAFPPATF MPPVQTSIPG LRPYPGLDQM SFLPHMAYTY PTGAATFADM BACU010024/1-998 PQSAFPPATF MPPVQTSIPG LRPYPGLDQM SFLPHMAYTY PTGAATFADM ENSP00000454157/1-1214 PQSAFPPATF MPPVQTSIPG LRPYPGLDQM SFLPHMAYTY PTGAATFADM ENSTTRP00000006127/1-1215 PQSAFPPATF MPPVQTSIPG LRPYPGLDQM SFLPHMAYTY PTGAATFADM ENSBTAP00000053646/1-1209 PQSAFPPATF MPPVQTSIPG LRPYPGLDQM SFLPHMAYTY PTGAATFADM 951 1000 bmy_02190T0/1-1140 QQRRKYQRKP GFQGELLDGA QDYMSGLDDM TDSDSCLSRK KIKKTESGMY BACU010024/1-998 QQRRKYQRKP GFQGELLDGA QDYMSGLDDM TDSDSCLSRK KIKKTESGMY ENSP00000454157/1-1214 QQRRKYQRKQ GFQGELLDGA QDYMSGLDDM TDSDSCLSRK KIKKTESGMY ENSTTRP00000006127/1-1215 QQRRKYQRKP GFQGELLDGA QDYMSGLDDM TDSDSCLSRK KIKKTESGMY ENSBTAP00000053646/1-1209 QQRRKYQRKP GFQGELLDGA QDYMSGLDDM TDSDSCLSRK KIKKTESGMY 1001 1050 bmy_02190T0/1-1140 ACDLCDKTFQ KSSSLLRHKY EHTGKRPHQC QICKKAFKHK HHLIEHSRLH BACU010024/1-998 ACDLCDKTFQ KSSSLLRHKY EHTGMSD--- ---------- ---------- ENSP00000454157/1-1214 ACDLCDKTFQ KSSSLLRHKY EHTGKRPHQC QICKKAFKHK HHLIEHSRLH ENSTTRP00000006127/1-1215 ACDLCDKTFQ KSSSLLRHKY EHTGKRPHQC QICKKAFKHK HHLIEHSRLH ENSBTAP00000053646/1-1209 ACDLCDKTFQ KSSSLLRHKY EHTGKRPHQC QICKKAFKHK HHLIEHSRLH 1051 1100 bmy_02190T0/1-1140 SGEKPYQCDK CGKRFSHSGS YSQHMNHRYS YCKREAEERE AAEREAREKG BACU010024/1-998 ---------- ---------- ---------- ---------- ---------- ENSP00000454157/1-1214 SGEKPYQCDK CGKRFSHSGS YSQHMNHRYS YCKREAEERE AAEREAREKG ENSTTRP00000006127/1-1215 SGEKPYQCDK CGKRFSHSGS YSQHMNHRYS YCKREAEERE AAEREAREKG ENSBTAP00000053646/1-1209 SGEKPYQCDK CGKRFSHSGS YSQHMNHRYS YCKREAEERE AAEREAREKG 1101 1150 bmy_02190T0/1-1140 HLEPTELLMN RAYLQSITPQ GYSDSEERES MPRDGESEKE HEKEGEDGYG BACU010024/1-998 ---------- ---------- ---------- ---------- ---------- ENSP00000454157/1-1214 HLEPTELLMN RAYLQSITPQ GYSDSEERES MPRDGESEKE HEKEGEDGYG ENSTTRP00000006127/1-1215 HLEPTELLMN RAYLQSITPQ GYSDSEERES MPRDGESEKE HEKEGEDGYG ENSBTAP00000053646/1-1209 HLEPTELLMN RAYLQSITPQ GYSDSEERES MPRDGESEKE HEKEGEDGYG 1151 1200 bmy_02190T0/1-1140 KLGRQDGDEE FEEEEEESEN KSMDTDPETI RDEEETGEHS MDDSSEDGKM BACU010024/1-998 ---------- FD-------- ---------- ---------- ---------- ENSP00000454157/1-1214 KLGRQDGDEE FEEEEEESEN KSMDTDPETI RDEEETGDHS MDDSSEDGKM ENSTTRP00000006127/1-1215 KLGRQDGDEE FEEEEEESEN KSMDTDPETI RDEEETGEHS MDDSSEDGKM ENSBTAP00000053646/1-1209 KLGRQDGDEE FEEEEEESEN KSMDTDPETI RDEEETGDHS MDDSSEDGKM 1201 1250 bmy_02190T0/1-1140 ETKSDHEEDN MEDGMNLK BACU010024/1-998 ---------- -------- ENSP00000454157/1-1214 ETKSDHEEDN MEDGM--- ENSTTRP00000006127/1-1215 ETKSDHEEDN MEDGM--- ENSBTAP00000053646/1-1209 ETKSDHEEDN MEDGM---