KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:01 2014 Check: 00 .. Name: BACU015133/1-171 Len: 1055 Check: 9424 Weight: 1.00 Name: ENSTTRP00000007339/1-1026 Len: 1055 Check: 4219 Weight: 1.00 Name: ENSP00000380602/1-1026 Len: 1055 Check: 9167 Weight: 1.00 Name: bmy_16202T0/1-526 Len: 1055 Check: 4651 Weight: 1.00 Name: ENSBTAP00000053677/1-875 Len: 1055 Check: 6288 Weight: 1.00 // 1 50 BACU015133/1-171 MQRLERICCV LLFFLLVCLF CFHFVVISCH CPYLEDVHFW TFSLLISDDY ENSTTRP00000007339/1-1026 ---------- -------MRL PWELLVLQ-- ---------- SFVLCLADDY ENSP00000380602/1-1026 ---------- -------MRL PWELLVLQ-- ---------- SFILCLADDS bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 ---------- ---------- ---------- ---------- ---------- 51 100 BACU015133/1-171 TLHGPIFIQE PSHVMFPLDS EEKKVKLSCE VKGNPKPHIR WKLNGTDVDI ENSTTRP00000007339/1-1026 TLHGPIFIQE PSHVMFPLDS EEKKVKLTCE VKGNPKPHIR WKLNGTDVDI ENSP00000380602/1-1026 TLHGPIFIQE PSPVMFPLDS EEKKVKLNCE VKGNPKPHIR WKLNGTDVDT bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 ---------- ---------- ---------- ---------- ---------- 101 150 BACU015133/1-171 GMDFRYSVVE GSLLINNPNK TQDAGTYQCR ATNSFGTIVS REAKLQFA-- ENSTTRP00000007339/1-1026 GMDFRYSVVE GSLLINNPNK TQDAGTYQCR ATNSFGTIVS REAKLQFAYL ENSP00000380602/1-1026 GMDFRYSVVE GSLLINNPNK TQDAGTYQCT ATNSFGTIVS REAKLQFAYL bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 ---------- ---------- ---------- ---------- ---------- 151 200 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 ENFKTRTRST VSVRQGQGMV LLCGPPAHAG ELSYAWIFNE YPSYQDNRRF ENSP00000380602/1-1026 DNFKTRTRST VSVRRGQGMV LLCGPPPHSG ELSYAWIFNE YPSYQDNRRF bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 ---------- ---------- ---------- ELSYAWIFNE YPSYQDNRRF 201 250 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 VSQETGNLYI AKVEKSDVGN YTCVVTNTVT NQKVLGPPTP LMLRNDGVMG ENSP00000380602/1-1026 VSQETGNLYI AKVEKSDVGN YTCVVTNTVT NHKVLGPPTP LILRNDGVMG bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 VSQETGNLYI AKVEKSDVGN YTCVVTNTVT NQKVLGPPTP LILRNDGVMG 251 300 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 EYEPKIEVQF PETVPTAKGT TVKLECFALG NPVPTIIWRR ADGKPIARKA ENSP00000380602/1-1026 EYEPKIEVQF PETVPTAKGA TVKLECFALG NPVPTIIWRR ADGKPIARKA bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 EYEPKIEVQF PETVPTAKGT TVKLECFALG NPVPTIIWRR ADGKPIATKA 301 350 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 RRHKSSGILE IPNFQQEDAG WYECVAENSR GKNIARGQLT FFAQPNWIQK ENSP00000380602/1-1026 RRHKSNGILE IPNFQQEDAG LYECVAENSR GKNVARGQLT FYAQPNWIQK bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 RRHKSNGILE IPNFQQEDAG LYECVAENSR GKNVAKGQLT FYAQPNWSQK 351 400 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 INDIHVAIEE NVFWECKANG RPKPTYRWLK NGEPLLTRDR IHIEQGTLNI ENSP00000380602/1-1026 INDIHVAMEE NVFWECKANG RPKPTYKWLK NGEPLLTRDR IQIEQGTLNI bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 INDIHVAIEE NVFWECKANG RPKPTYRWLK NGEPLLTRDR IHIEQGTLNI 401 450 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 TIVNLSDAGM YQCVAENKHG VIFSSAELSV IAVGPDFSRT LLKRVTLVKV ENSP00000380602/1-1026 TIVNLSDAGM YQCLAENKHG VIFSNAELSV IAVGPDFSRT LLKRVTLVKV bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 TIVNLSDAGM YQCVAENKHG VIFSSAELSV IAVGPDFSRT LLKRVTLVKV 451 500 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 GGEVVIECKP KASPKPVYTW KKGRDVLREN ERITISEDGS LRIVNVTKSD ENSP00000380602/1-1026 GGEVVIECKP KASPKPVYTW KKGRDILKEN ERITISEDGN LRIINVTKSD bmy_16202T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053677/1-875 GGEVVIECKP KASPKPVHTW KKGRDVLKEN ERITISEDGS LRIINVTKSD 501 550 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 AGSYTCIATN HFGTASSTGN LVVKDPTRVM VPPSSMDVTV GESIVLPCQV ENSP00000380602/1-1026 AGSYTCIATN HFGTASSTGN LVVKDPTRVM VPPSSMDVTV GESIVLPCQV bmy_16202T0/1-526 ---------- ---------- ---------M VPPSSMDVTV GESIVLPCQV ENSBTAP00000053677/1-875 AGSYTCIATN HFGTASSTGN LVVKDPTKVM VPPSSMDVTV GESIVLPCQV 551 600 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 THDHSLNIVF TWSFNGHLID FDKDGDHFER VGGQDSAGDL MIRNIQLKHA ENSP00000380602/1-1026 THDHSLDIVF TWSFNGHLID FDRDGDHFER VGGQDSAGDL MIRNIQLKHA bmy_16202T0/1-526 THDHSLNIVF TWSFNGHLID FDKDGDHFER VGGQDSAGDL MIRNIQLKHA ENSBTAP00000053677/1-875 THDHSLNIVF TWSFNGRLID FDRDGDHFER VGGQDSAGDL MIRNIQLKHA 601 650 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 GKYVCMVQTS VDKLSAAADL IVRGPPGPPE AVAIDEITDT TAQLSWRPGP ENSP00000380602/1-1026 GKYVCMVQTS VDRLSAAADL IVRGPPGPPE AVTIDEITDT TAQLSWRPGP bmy_16202T0/1-526 GKYVCMVQTS VDKLSAAADL IVRGPPGPPE AVTIDEITDT TAQLSWRPGP ENSBTAP00000053677/1-875 GKYICMVQTS VDRLSAAADL IVRGPPGPPE AVTIDEITDT TAQLSWRPGP 651 700 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 DNHSPITMYV IQARTPFSVG WQAVNTVPEL IDGKTFTATV VGLNPWVEYE ENSP00000380602/1-1026 DNHSPITMYV IQARTPFSVG WQAVSTVPEL IDGKTFTATV VGLNPWVEYE bmy_16202T0/1-526 DNHSPITMYV IQARTPFSVG WQAVNTVPEL IDGKTFTATV VGLNPWVEYE ENSBTAP00000053677/1-875 DNHSPITMYV IQARTPFSVG WQAVNTVPEL IDGKTFTATV VGLNPWVEYE 701 750 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 FRTVAANVIG IGEPSQPSEK RRTEEALPEV TPANVSGGGG SKSELVITWE ENSP00000380602/1-1026 FRTVAANVIG IGEPSRPSEK RRTEEALPEV TPANVSGGGG SKSELVITWE bmy_16202T0/1-526 FRTVAANVIG IGEPSQPSEK RRTEEALPEV TPANVSGGGG SKSELVITWE ENSBTAP00000053677/1-875 FRTVAANVIG IGEPSRPSEK RRTEEALPEV TPANVSGGGG SKSELVITWE 751 800 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 TVPEELQNGR GFGYVVAFRP YGKMIWMLTV LASADASRYV FRNESVHPFS ENSP00000380602/1-1026 TVPEELQNGR GFGYVVAFRP YGKMIWMLTV LASADASRYV FRNESVHPFS bmy_16202T0/1-526 TVPEELQNGR GFGYVVAFRP YGKMIWMLTV LASADASRYV FRNESVHPFS ENSBTAP00000053677/1-875 TVPEELQNGR GFGYVVAFRP YGKMIWMLTV LASADASRYV FRNESVRPFS 801 850 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 PFEVKVGVFN NKGEGPFSPT TVVYSAEEEP TKAPANIFAR SLSATDVEVF ENSP00000380602/1-1026 PFEVKVGVFN NKGEGPFSPT TVVYSAEEEP TKPPASIFAR SLSATDIEVF bmy_16202T0/1-526 PFEVKVGVFN NKGEGPFSPT TVVYSAEEEP TKAPANIFAR SLSATDVEVF ENSBTAP00000053677/1-875 PFEVKVGVFN NKGEGPFSPT TVVYSAEEEP TKPPASIFAR SLSATDIEVF 851 900 BACU015133/1-171 ---------- ---------- ---------- --------SI TRVTTL---- ENSTTRP00000007339/1-1026 WASPMEKNRG RIQGYEVKYW RHDDKEENAR KIRTIGNQTS TKITNLKGSA ENSP00000380602/1-1026 WASPLEKNRG RIQGYEVKYW RHEDKEENAR KIRTVGNQTS TKITNLKGSV bmy_16202T0/1-526 WASPMEKNRG RIQGYEVKYW RHDDKEENAR KIRTIGNQTS TKITNLKGSA ENSBTAP00000053677/1-875 WASPMEKNRG RIQGYEVKYW RHDDKEENAR KIRTIGNQTS TKITNLKGSA 901 950 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 LYHLAVKAYN SAGTGPSSAT VNVTTRKPPP GQPPRNIIWK SSDSEIILNW ENSP00000380602/1-1026 LYHLAVKAYN SAGTGPSSAT VNVTTRKPPP SQPPGNIIWN SSDSKIILNW bmy_16202T0/1-526 LYHLAVKAYN SAGTGPSSAT VNVTTRKPPP SQPPGNIIWN SSDSKIILNW ENSBTAP00000053677/1-875 LYHLAVKAYN SAGTGPASAT VNVTTRKPPP SQPPGNIIWN SSDSKIILNW 951 1000 BACU015133/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007339/1-1026 DHLKALDNDS EVKGYKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380602/1-1026 DQVKALDNES EVKGYKVLYR WNRQSSTSVI ETNKTSVELS LPFDEDYIIE bmy_16202T0/1-526 DQVKALDNES EVKGYKVLYR WSRQSSTSVI ETNKTSVELS LPFDEDYIIE ENSBTAP00000053677/1-875 DQVKALDNES EVKGYKVLYR WSRQSSTSVI ETNKTSVELS LPFDEDYIIE 1001 1050 BACU015133/1-171 ---------- ---------- ---------- -------ALQ RVEHERIEMI ENSTTRP00000007339/1-1026 XXXXXXXXXX XXXXXXXXXX XXXAYARGAG PSTSNACTLS AISTIMISLT ENSP00000380602/1-1026 IKPFSDGGDG SSSEQIRIPK ISNAYARGSG ASTSNACTLS AISTIMISLT bmy_16202T0/1-526 IKPFSDGGDG SSSEQIRIPK ISNAYARGAG PSTSNACTLS AISTIMISLT ENSBTAP00000053677/1-875 IKPFSDGGDG SSSEQIRIPK ISNAYARGAG PSTSNACTLS AISTIMISLT 1051 1100 BACU015133/1-171 QR--- ENSTTRP00000007339/1-1026 ARSSL ENSP00000380602/1-1026 ARSSL bmy_16202T0/1-526 ARSSL ENSBTAP00000053677/1-875 ARSSL