KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:25 2014 Check: 00 .. Name: ENSP00000367797/1-728 Len: 758 Check: 8634 Weight: 1.00 Name: BACU001157/1-254 Len: 758 Check: 8779 Weight: 1.00 Name: ENSBTAP00000053695/1-725 Len: 758 Check: 9222 Weight: 1.00 Name: bmy_10060T0/1-755 Len: 758 Check: 4460 Weight: 1.00 Name: ENSTTRP00000009329/1-633 Len: 758 Check: 9145 Weight: 1.00 // 1 50 ENSP00000367797/1-728 ---------- ---------- -------MEA AAGGRGCFQP HPGLQKTLEQ BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 ---------- ---------- ---------- -MDSVVSHWP CPGCPADXEQ bmy_10060T0/1-755 MTQVPSEEPT APAAGAHGDG GDSQTQREAS PSPSLGQRPP HPGLQKTLEQ ENSTTRP00000009329/1-633 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000367797/1-728 FHLSSMSSLG GPAAFSARWA QEAYKKESAK EAGAAAVPAP VPAATEPPPV BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 FHLSSMSSLG GPAAFSARWA QEAYKKESAK EAGAAAVPAP VPAAAEPPPV bmy_10060T0/1-755 FHLSSMSSLG GPAAFSARWA QEAYKKESSK EAGAAAVPAP VPAAAEPPPV ENSTTRP00000009329/1-633 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000367797/1-728 LHLPAIQPPP PVLPGPFFMP SDRSTERCET VLEGETISCF VVGGEKRLCL BACU001157/1-254 ---------- --------MP SDRSTERCET VLEGETISCF VVGGEKRLCL ENSBTAP00000053695/1-725 LHLPAIQPPP PVLPGPFFMP SDRSTERCET VLEGETISCF VVGGEKRLCL bmy_10060T0/1-755 LHLPAIQPPP PVLPGPFFMP SDRSTERCET VLEGETISCF VVGGEKRLCL ENSTTRP00000009329/1-633 -----IQPPP PVLPGPFFMP SDRSTERCET VLEGETISCF VVGGEKRLCL 151 200 ENSP00000367797/1-728 PQILNSVLRD FSLQQINAVC DELHIYCSRC TADQLEILKV MGILPFSAPS BACU001157/1-254 PQILNSVLRD FSLQQINSVC DELHIYCSRC TADQLEILKV MGILPFSAPS ENSBTAP00000053695/1-725 PQILNSVLRD FSLQQINSVC DELHIYCSRC TADQLEILKV MGILPFSAPS bmy_10060T0/1-755 PQILNSVLRD FSLQQINSVC DELHIYCSRC TADQLEILKV MGILPFSAPS ENSTTRP00000009329/1-633 PQILNSVLRD FSLQQINSVC DELHIYCSRC TADQLEILKV MGILPFSAPS 201 250 ENSP00000367797/1-728 CGLITKTDAE RLCNALLYGG AYPPPCKKEL AASLALGLEL SERSVRVYHE BACU001157/1-254 CGLITKTDAE RLCNALLYGG AYPPPCKKEL AASLALGLEL SERSVRVYHE ENSBTAP00000053695/1-725 CGLITKTDAE RLCNALLYGG AYPPPCKKEL AASLALGLEL SERSVRVYHE bmy_10060T0/1-755 CGLITKTDAE RLCNALLYGG AYPPPCKKEL AASLALGLEL SERSVRVYHE ENSTTRP00000009329/1-633 CGLITKTDAE RLCNALLYGG AYPPPCKKEL AASLALGLEL SERSVRVYHE 251 300 ENSP00000367797/1-728 CFGKCKGLLV PELYSSPSAA CIQCLDCRLM YPPHKFVVHS HKALENRTCH BACU001157/1-254 CFGKCKGLLV PELYNSPSAA CIQCLDCRLM YPPHKFVVHS HKALENQPCH ENSBTAP00000053695/1-725 CFGKCKGLLV PELYSSPSAA CIQCLDCRLM YPPHKFVVHS HKALENRTCH bmy_10060T0/1-755 CFGKCKGLLV PELYNSPSAA CIQCLDCRLM YPPHKFVVHS HKALENRTCH ENSTTRP00000009329/1-633 CFGKCKGLLV PELYNSPSAA CIQCLDCRLM YPPHKFVVHS HKALENRTCH 301 350 ENSP00000367797/1-728 WGFDSANWRA YILLSQDYTG KEEQARLGRC LDDVKEKFDY GNKYKRRVPR BACU001157/1-254 WGFDSANWRA YILLSQDYTG KEEQARLGRC LDDVKEKFDY GNKYKRRVPR ENSBTAP00000053695/1-725 WGFDSANWRA YILLSQDYTG KEEQARLGRC LDDVKEKFDY GNKYKRRVPR bmy_10060T0/1-755 WGFDSANWRA YILLSQDYTG KEEQARLGRC LDDVKEKFDY GNKYKRRVPR ENSTTRP00000009329/1-633 WGFDSANWRA YILLSQDYTG KEEQARLGRC LDDVKEKFDY GNKYKRRVPR 351 400 ENSP00000367797/1-728 VSSEPPASIR PKTDDTSSQS PAPSEKDKPS SWLRTLAGSS NKSLGCVHPR BACU001157/1-254 A-EQA----- ---------- ---------- ------AGGC AVSLG----- ENSBTAP00000053695/1-725 V-SDPPASVR -KADDAPSQH PTSSEKDKQP GWLRTLASSS SKSLGCVHPR bmy_10060T0/1-755 V-SEPPASVR -KADDAPSQH PTSSEKDKQS GWLRTLAGSS SKSLGCVHPR ENSTTRP00000009329/1-633 V-SEPPASVR -KADDAPSQH PTPSEKDKQS GWLRTLAGSS SKSLGCIHPR 401 450 ENSP00000367797/1-728 QRLSAFRPWS PAVSASEKEL SPHLPALIRD SFYSYKSFET AVAPNVALAP BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 QRLSAFRPWS PAVSASDKEL SPHLPALIRD SFYSYKSFET GVAPNVALAP bmy_10060T0/1-755 QRLSAFRPWS PAVSASDKEL SPHLPALIRD SFYSYKSFET GVAPNVALAP ENSTTRP00000009329/1-633 QRLSAFRPWS PAVSASDKEL SPHLPALIRD SFYSYKSFET GVAPNVALAP 451 500 ENSP00000367797/1-728 PAQQKVVSSP PCAAAVSRAP EPLATCTQPR KRKLTVDTPG APETLAPVAA BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 PAQHKAVSSP PCATVVSRAP EPLPACIQPR KRKLPADTPG APETPAPGPA bmy_10060T0/1-755 PAQHK-VSSP PCATVVSRAP EPVTSCVQPR KRKLTVDTPG APETPAPGPA ENSTTRP00000009329/1-633 PAQHKVASSP PCATVVSRAP EPVTSCVQPR KRKLTVDTPG APETPAPGPA 501 550 ENSP00000367797/1-728 PEEDKDSEAE VEVESREEFT SSLSSLSSPS FTSSSSAKDL GSPGARALPS BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 PEEDKDSEAE VEVESREEFT SSLSSLSSPS FTSSSSAKDL SSPGLLAPPA bmy_10060T0/1-755 PEEDKDSEAE VEVEGREEFT SSLSSLSSPS FTSSGSAKDL SSPGLLALPA ENSTTRP00000009329/1-633 PEEEKDSEAE VEVEGREEFT SSLSSLSSPS FTSSGSAKDL SSPGLLALPA 551 600 ENSP00000367797/1-728 A--VPDAAAP ADAP-SGLEA ELEHLRQALE GGLDTKEAKE KFLHEVVKMR BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 APAAPDATAP TDTPSSGLEA ELEHLRQALE GGLDTKEAKE KFLHEVVKMR bmy_10060T0/1-755 APGAPDAAAP ADAPSSGLEV ELEHLRQALE GGLDTKEAKE KFLHEVVKMR ENSTTRP00000009329/1-633 APGAPDAAAP ADAPSSGLEA ELEHLRQALE GGLDTKEAKE KFLHEVVKMR 601 650 ENSP00000367797/1-728 VKQEEKLSAA LQAKRSLHQE LEFLRVAKKE KLREATEAKR NLRKEIERLR BACU001157/1-254 ---------- LEPGRSL--- ---------- ---------- ---------- ENSBTAP00000053695/1-725 VKQEEKLSAA LQAKRSLHQE LEFLRVAKKE KLREATEAKR SLRKEIERLR bmy_10060T0/1-755 VKQEEKLSAA LQAKRSLHQE LEFLRVAKKE KLREATEAKR SLRKEIERLR ENSTTRP00000009329/1-633 VKQEEKLSAA LQAKRSLHQE LEFLRVAKKE KLREATEAKR SLRKEIERL- 651 700 ENSP00000367797/1-728 AENEKKMKEA NESRLRLKRE LEQARQARVC DKGCEAGRLR AKYSAQIEDL BACU001157/1-254 ---------- ---------- ---------C G--------- ---------- ENSBTAP00000053695/1-725 AENEKKMKEA NEARLRLKRE LEQARQARVC DKGCEAGRLR AKYSAQIEDL bmy_10060T0/1-755 AENEKKMKEA NEARLRLKRE LEQARQARVC DKGCEAGRLR AKYSAQIEDL ENSTTRP00000009329/1-633 ---------- ------LXR- LEQARQARVC DKGCEAGRLR AKYSAQIEDL 701 750 ENSP00000367797/1-728 QVKLQHAEAD REQLRADLLR EREAREHLEK VVKELQEQLW PRARPEAAGS BACU001157/1-254 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053695/1-725 QVKLQHAEAD REQLRADLLR EREAREHLEK VVKGLQEQLW PRPHSEAAGG bmy_10060T0/1-755 QVKLQHAEAD REQLRADLLR EREAREHLEK VVKGLQEQLW PRPRSEATGG ENSTTRP00000009329/1-633 QVKLQHAEAD REQLRADLLR EREAREHLEK VVKGLQEQLW PRPRSEATGG 751 800 ENSP00000367797/1-728 EGAAELEP BACU001157/1-254 -------- ENSBTAP00000053695/1-725 ESTAELEP bmy_10060T0/1-755 ESTAELEP ENSTTRP00000009329/1-633 ESMAELEP