KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:26 2014 Check: 00 .. Name: ENSP00000261867/1-429 Len: 431 Check: 8744 Weight: 1.00 Name: ENSBTAP00000053701/1-429 Len: 431 Check: 8554 Weight: 1.00 Name: ENSTTRP00000007244/1-313 Len: 431 Check: 1201 Weight: 1.00 Name: BACU002856/1-335 Len: 431 Check: 9460 Weight: 1.00 Name: bmy_17278T0/1-245 Len: 431 Check: 7438 Weight: 1.00 // 1 50 ENSP00000261867/1-429 MAGSGAWKRL KSMLRKDDAP LFLNDTSAFD FSDEAGDEGL SRFNKLRVVV ENSBTAP00000053701/1-429 MAGSGAWKRL KSMLRKDDAP LFLNDTSAFD FSDEVGDEGL SRFNKLRVVV ENSTTRP00000007244/1-313 ---------- ---------- ---------- ---------- ---------- BACU002856/1-335 MAGSGVWKRL KSLLRKDDAP LFLNDTSAFD FSDEVGDEGL SRFNKLRVVV bmy_17278T0/1-245 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000261867/1-429 ADDGSEAPER PVNGAHPTLQ ADDDSLLDQD LPLTNSQLSL KVDSCDNCSK ENSBTAP00000053701/1-429 ADDGSEAPER PANGAHSALQ ADDDSLLDQD LPLTNSQLSL KADPCDNCSK ENSTTRP00000007244/1-313 ---------- ---------- ---------- ---------- ---------- BACU002856/1-335 ADDGSETPER PVNGAHPALQ ADDDSLLDQD LPLTNSQLSL KVDPCDSCSK bmy_17278T0/1-245 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000261867/1-429 QREILKQRKV KARLTIAAVL YLLFMIGELV GGYIANSLAI MTDALHMLTD ENSBTAP00000053701/1-429 QRELLKQRKV KTRLTIAAVL YLLFMIGELV GGYIANSLAI MTDALHMLTD ENSTTRP00000007244/1-313 ---------- --------VL YLLFMIGELV GGYIANSLAI MTDALHMLTD BACU002856/1-335 QRELLKQRKV KTRLTIAAVL YLLFMIGELV ---------- ---------- bmy_17278T0/1-245 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000261867/1-429 LSAIILTLLA LWLSSKSPTK RFTFGFHRLE VLSAMISVLL VYILMGFLLY ENSBTAP00000053701/1-429 LSAIILTLLA LWLSSKSPTK RFTFGFHRLE VLSAMISVLL VYILMGFLLY ENSTTRP00000007244/1-313 LSAIILTLLA LWLSSKSPTK RFTFGFHRLE VLSAMISVLL VYILMGFLLY BACU002856/1-335 ---------- ---------- ---------E VLSAMISVLL VYILMGFLLY bmy_17278T0/1-245 ---------- ---------- ---------- ----MISVLL VYILMGFLLY 201 250 ENSP00000261867/1-429 EAVQRTIHMN YEINGDIMLI TAAVG--VAV NVIMGFLLNQ SGHRHSHSHS ENSBTAP00000053701/1-429 EAVQRTIHMK YEINGDIMLI TAAIG--VAV NVIMGFLLNQ SGHHHAHSHS ENSTTRP00000007244/1-313 EAVQRTIHMK YEINGDIMLI TAAVGVAVAV SIIMGLLLNQ SGHHHAHSHS BACU002856/1-335 EAVQRTIHMK YEINGDIMLI TAAVG--VAV NMIMGLLLNQ SGHHHAHSHS bmy_17278T0/1-245 EAVQRTIHMK YEINGDIMLI TAAVG--VAV NMIMGLLLNQ SGHHHAHSHS 251 300 ENSP00000261867/1-429 LPSNSPTRGS GCERNHGQDS LAVRAAFVHA LGDLVQSVGV LIAAYIIRFK ENSBTAP00000053701/1-429 LPSNSPTTGP RCGHNQGQDS LAVRAAFVHA LGDLVQSVGV LIAAYIIRFK ENSTTRP00000007244/1-313 LPSNSPTTGS RCGQNHGQDS LAVRAAFVHA LGDLVQSVGV LIAAYIIRFK BACU002856/1-335 LPSNSPTTGS RCGHNHGQDS LAVRAAFIHA LGDLVQSVGV LIAAYIIRFK bmy_17278T0/1-245 LPSNSPTTGS RCGHNHGQDS LAVRAAFIHA LGDLVQSVGV LIAAYIIRFK 301 350 ENSP00000261867/1-429 PEYKIADPIC TYVFSLLVAF TTFRIIWDTV VIILEGVPSH LNVDYIKEAL ENSBTAP00000053701/1-429 PEYRIADPIC TYVFSLLVAF TTFRIIWDTV VIILEGVPSH LNVDYIKEAL ENSTTRP00000007244/1-313 PEYKIADPIC TYVFSLLVAF TTFRIVWDTV VIILEXXXXX XXXXXXXXXX BACU002856/1-335 PEYKIADPIC TYVFSLLVAF TTFRIIWDTV VIILE----- ---------- bmy_17278T0/1-245 PEYKIADPIC TYVFSLLVAF TTLRIIWDTV VIILEGVPSH LNVDYIKEAL 351 400 ENSP00000261867/1-429 MKIEDVYSVE DLNIWSLTSG KSTAIVHIQL IPGSSSKWEE VQSKANHLLL ENSBTAP00000053701/1-429 MKIEDVHSVE DLNIWSLTSG KPTAIVHIQL IPGSSSKWEE VQSKAKHLLL ENSTTRP00000007244/1-313 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XPGSSSKWEE VQSKAKHLLL BACU002856/1-335 ---------- ---------- ---------- VPGSSSKWEE VQSKAKHLLL bmy_17278T0/1-245 MKIEDVYSVE DLNIWSLTSG KPTAIVHIQL IPGSSSKWEE VQSKAKHLLL 401 450 ENSP00000261867/1-429 NTFGMYRCTI QLQSYRQEVD RTCANCQSSS P ENSBTAP00000053701/1-429 NTFGMYKCTI QLQSYRQEVN RTCANCQSSS S ENSTTRP00000007244/1-313 NTFGMYKCTI QLQSYRQEVD RTCANCQSSS P BACU002856/1-335 NTFGMYKCTI QLQSYRQEVD RTCANCQSSS P bmy_17278T0/1-245 NTFGMYKCTI QLQSYRQEVD RTCANCQSSS P