KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:48 2014 Check: 00 .. Name: ENSP00000265742/1-1089 Len: 1214 Check: 4559 Weight: 1.00 Name: ENSBTAP00000053741/1-1091 Len: 1214 Check: 4891 Weight: 1.00 Name: bmy_09339T0/1-650 Len: 1214 Check: 2114 Weight: 1.00 Name: ENSTTRP00000010736/1-1211 Len: 1214 Check: 7488 Weight: 1.00 Name: BACU016859/1-1091 Len: 1214 Check: 6410 Weight: 1.00 // 1 50 ENSP00000265742/1-1089 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053741/1-1091 ---------- ---------- ---------- ---------- ---------- bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 AAAGEAWGAP AQSEPRRRRF QLSQSSPRAS RAHPRPRQPL PGGRTGAGEE BACU016859/1-1091 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000265742/1-1089 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053741/1-1091 ---------- ---------- ---------- ---------- ---------- bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 GAPARVGGAR GVPEVTGSAR EAGAAELQSC GVHRPLPSVR EVTNVKHVVE BACU016859/1-1091 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000265742/1-1089 ---------- ---------- --MGNTTTKF RKALINGDEN LACQIYENNP ENSBTAP00000053741/1-1091 ---------- ---------- --MGSSTTKF RKALINGDEN LACQIYESNP bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 AFKKWLKGEG KCHYLSEKTK QNMGNTTTKF RKALINGDEN LACQIYENNP BACU016859/1-1091 ---------- ---------- --MGNTTTKF RKALINGDEN LACQIYENNP 151 200 ENSP00000265742/1-1089 QLKESLDPNT SYGEPYQHNT PLHYAARHGM NKILGTFL-G RDGNPNKRNV ENSBTAP00000053741/1-1091 QLKESLDPNT SYGEPYQHNT PLHYAARHGM NRILGTFLFG RDGNPNKRNV bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 QLKESLDPNT SYGEPYQHNT PLHYAARHGM NRILGTFLFG RDGNPNKRNV BACU016859/1-1091 QLKESLDPNT SYGEPYQHNT PLHYAARHGM NRILGTFLFG RDGNPNKRNV 201 250 ENSP00000265742/1-1089 HNETSMHLLC MGPQIMISEG ALHPRLARPT EDDFRRADCL QMILKWKGAK ENSBTAP00000053741/1-1091 HNETSMHLLC MGPQIMISEG ALHPRLARPA EDDFRRADCL QMILRWKGAK bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 HNETSMHLLC MGPQIMISEG ALHPRLARPA EDDFRRADCL QMILRWKGAK BACU016859/1-1091 HNETSMHLLC MGPQIMISEG ALHPRLARPT EDDFRRADCL QMILRWKGAK 251 300 ENSP00000265742/1-1089 LDQGEYERAA IDAVDNKKNT PLHYAAASGM KACVELLVKH GGDLFAENEN ENSBTAP00000053741/1-1091 LDQGEYERAA IDAVDNKKNT PLHYAAASGM KTCVELLVKH GGDLFAENEN bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 LDQGEYERAA VDAVDNKKNT PLHYAAASGM KTCVELLVKH GGDLFAENEN BACU016859/1-1091 LDQGEYERAA IDAVDNKKNT PLHYAAASGM KTCVELLVKH GGDLFAENEN 301 350 ENSP00000265742/1-1089 KDTPCDCAEK QHHKDLALNL ESQMVFSRDP EAEEIEAEYA ALDKREPYEG ENSBTAP00000053741/1-1091 KDTPCDCAEK QHHKDLALNL ESQMVFSRDP EAEEIEAEYA ALDKREPYEG bmy_09339T0/1-650 ---------- ---------- ---MVFSRDP EAEEIEAEYA ALDKREPYEG ENSTTRP00000010736/1-1211 KDTPCDCAEK QHHKDLALNL ESQMVFSRDP EAEEIEAEYA ALDKREPYEG BACU016859/1-1091 KDTPCDCAEK QHHKDLALNL ESQMVFSRDP EAEEIEAEYA ALDKREPYEG 351 400 ENSP00000265742/1-1089 LRPQDLRRLK DMLIVETADM LQAPLFTAEA LLRAHDWDRE KLLEAWMSNP ENSBTAP00000053741/1-1091 LRPQDLRRLK DMLIVETADM LQAPLFTAEA LLRAHDWDRE KLLEAWMSNP bmy_09339T0/1-650 LRPQDLRRLK DMLIVETADM LQAPLFTAEA LLRAHDWDRE KLLEAWMSNP ENSTTRP00000010736/1-1211 LRPQDLRRLK DMLIVETADM LQAPLFTAEA LLRAHDWDRE KLLEAWMSNP BACU016859/1-1091 LRPQDLRRLK DMLIVETADM LQAPLFTAEA LLRAHDWDRE KLLEAWMSNP 401 450 ENSP00000265742/1-1089 ENCCQRSGVQ MPTPPPSGYN AWDTLPSPRT PRTTRSSVTS PDEISLSPGD ENSBTAP00000053741/1-1091 ENCCQRSGVQ MPTPPPSGYN AWDTLPSPRT PRTTRSSVTS PDELSLSPGD bmy_09339T0/1-650 ENCCQRSGVQ MPTPPPSGYN AWDTLPSPRT PRTTRSSVTS PDEISLSPGD ENSTTRP00000010736/1-1211 ENCCQRSGVQ MPTPPPSGYN AWDTLPSPRT PRTTRSSITS PDEISLSPGD BACU016859/1-1091 ENCCQRSGVQ MPTPPPSGYN AWDTLPSPRT PRTTRSSVTS PDEISLSPGD 451 500 ENSP00000265742/1-1089 LDTSLCDICM CSISVFEDPV DMPCGHDFCR GCWESFLNLK IQEGEAHNIF ENSBTAP00000053741/1-1091 LDTSLCDICM CSISVFEDPV DMPCGHDFCR GCWESFLNLK IQEGEAHNIF bmy_09339T0/1-650 LDTSLCDICM CSISVFEDPV DMPCGHDFCR GCWESFLNLK IQEGEAHNIF ENSTTRP00000010736/1-1211 LDTSLCDICM CSISVFEDPV DMPCGHDFCR GCWESFLNLK IQEGEAHNIF BACU016859/1-1091 LDTSLCDICM CSISVFEDPV DMPCGHDFCR GCWESFLNLK IQEGEAHNIF 501 550 ENSP00000265742/1-1089 CPAYDCFQLV PVDIIESVVS KEMDKRYLQF DIKAFVENNP AIKWCPTPGC ENSBTAP00000053741/1-1091 CPAYDCFQLV PVDIIESVVS KEMDKRYLQF DIKAFVENNP AIKWCPTPGC bmy_09339T0/1-650 CPAYDCFQLV PVDIIESVVS KEMDKRYLQF DIKAFVENNP AIKWCPTPGC ENSTTRP00000010736/1-1211 CPAYDCFQLV PVDIIESVVS KEMDKRYLQF D--AFVENNP AIKWCPTPGC BACU016859/1-1091 CPAYDCFQLV PVDIIESVVS KEMDKRYLQF DIKAFVENNP AIKWCPTPGC 551 600 ENSP00000265742/1-1089 DRAVRLTKQG SNTSGSDTLS FPLLRAPAVD CGKGHLFCWE CLGEAHEPCD ENSBTAP00000053741/1-1091 ERAVRLTKQG SDTSGSDTLS FPLLRAPAVD CGKGHLFCWE CLGEAHEPCD bmy_09339T0/1-650 ERAVRLTKQG SDTSGSDTLS FPLLRAPAVD CGKGHLFCWE CLGEAHEPCD ENSTTRP00000010736/1-1211 ERAVRLTKQG SNTSGSDTLS FPLLRAPAVD CGKGHLFCWE CLGEAHEPCD BACU016859/1-1091 ERAVRLTKQG SNTSGSDTLS FPLLRAPAVD CGKGHLFCWE CLGEAHEPCD 601 650 ENSP00000265742/1-1089 CQTWKNWLQK ITEMKPEELV GVSEAYEDAA NCLWLLTNSK PCANCKSPIQ ENSBTAP00000053741/1-1091 CQTWKNWLQK ITEMKPEELV GVSEAYEDAA NCLWLLTNSK PCANCKSPIQ bmy_09339T0/1-650 CQTWKNWLQK ITEMKPEELV GVSEAYEDAA NCLWLLTNSK PCANCKSPIQ ENSTTRP00000010736/1-1211 CQTWKNWLQK ITEMKPEELV GVSEAYEDAA NCLWLLTNSK PCANCKSPIQ BACU016859/1-1091 CQTWKNWLQK ITEMKPEELV GVSEAYEDAA NCLWLLTNSK PCANCKSPIQ 651 700 ENSP00000265742/1-1089 KNEGCNHMQC AKCKYDFCWI CLEEWKKHSS STGGYYRCTR YEVIQHVEEQ ENSBTAP00000053741/1-1091 KNEGCNHMQC AKCKYDFCWI CLEEWKKHSS STGGYYRCTR YEVIQHVEEQ bmy_09339T0/1-650 KNEGCNHMQC AKCKYDFCWI CLEEWKKHSS STGGYYRCTR YEVIQHVEEQ ENSTTRP00000010736/1-1211 KNEGCNHMQC AKCKYDFCWI CLEEWKKHSS STGGYYRCTR YEVIQHVEEQ BACU016859/1-1091 KNEGCNHMQC AKCKYDFCWI CLEEWKKHSS STGGYYRCTR YEVIQHVEEQ 701 750 ENSP00000265742/1-1089 SKEMTVEAEK KHKRFQELDR FMHYYTRFKN HEHSYQLEQR LLKTAKEKME ENSBTAP00000053741/1-1091 SKEMTVEAEK KHKRFQELDR FMHYYTRFKN HEHSYQLEQR LLKTAKEKME bmy_09339T0/1-650 SKEMTVEAEK KHKRFQELDR FMHYYTRFKN HEHSYQLEQR LLKTAKEKME ENSTTRP00000010736/1-1211 SKEMTVEAEK KHKRFQELDR FMHYYTRFKN HEHSYQLEQR LLKTAKEKME BACU016859/1-1091 SKEMTVEAEK KHKRFQELDR FMHYYTRFKN HEHSHQLEQR LLKTAKEKME 751 800 ENSP00000265742/1-1089 QLSRALKETE GGCPDTTFIE DAVHVLLKTR RILKCSYPYG FFLEPKSTKK ENSBTAP00000053741/1-1091 QLSRALKETE GACPDTTFIE DAVHVLLKTR RILKCSYPYG FFLELKSTKK bmy_09339T0/1-650 QLSRALKETE GGCPDTTFIE DAVHVLLKTR RILKCSYPYG FFLEPKSTKK ENSTTRP00000010736/1-1211 QLSRALKETE GGCPDTTFIE DAVHVLLKTR RILKCSYPYG FFLEPKSTKK BACU016859/1-1091 QLSRALKETE GGCPDTTFIE DAVHVLLKTR RILKCSYPYG FFLEPKSTKK 801 850 ENSP00000265742/1-1089 EIFELMQTDL EMVTEDLAQK VNRPYLRTPR HKIIKAACLV QQKRQEFLAS ENSBTAP00000053741/1-1091 EIFELMQTDL EMVTEDLAQK VNRPYLRTPR HKIIKAACLV QQKRQEFLAS bmy_09339T0/1-650 EIFELMQTDL EMVTEDLAQK VNRPYLRTPR HKIIKAACLV QQKRQEFLAS ENSTTRP00000010736/1-1211 EIFELMQTDL EMVTEDLAQK VNRPYLRTPR HKIIKAACLV QQKRQEFLAS BACU016859/1-1091 EIFELMQTDL EMVTEDLAQK VNRPYLRTPR HKIIKAACLV QQKRQEFLAS 851 900 ENSP00000265742/1-1089 VARGVAPADS PEAPRRSFAG GTWDWEYLGF ASPEEYAEFQ YRRRHR-QRR ENSBTAP00000053741/1-1091 VARGVAPADS PEAPRRSFAG GTWDWEYLGF ASPEEYAEFQ YRRRHRQQRR bmy_09339T0/1-650 VARGVAPADS PEAPRRSFAG GTWDWEYLGF ASPEEYAEFQ YRRRHRQQRR ENSTTRP00000010736/1-1211 VARGVAPADS PEAPRRSFAG GTWDWEYLGF ASPEEYAEFQ YRRRHRQQRR BACU016859/1-1091 VARGVAPADS PEAPRRSFAG GTWDWEYLGF ASPEEYAEFQ YRRRHRQQRR 901 950 ENSP00000265742/1-1089 RGDVHSLLSN PPDPDEPSES TLDIPEGGSS SRRPGTSVVS SASMSVLHSS ENSBTAP00000053741/1-1091 RGDVHSLLSN PPDPDEPSES TLDLPEGG-G GRRPGTSVVS SASMSALHTS bmy_09339T0/1-650 RGDVHSMLSN PPDPDEPSES TLDIPEGG-G GHRPGTSVVS SASMSALHSS ENSTTRP00000010736/1-1211 RGDVHSMLSN PPDPDEPSES TLDIPEGG-G GHRPGTSVVS SASMSALHSS BACU016859/1-1091 RGDVHSMLSN PPDPDEPSES TLDIPEGG-G GHRPGTSVVS SASMSALHSS 951 1000 ENSP00000265742/1-1089 SLRDYTPASR SENQDSLQAL SSLDEDDPNI LLAIQLSLQE SGLALDEETR ENSBTAP00000053741/1-1091 SLRDYTPASR SENQDSLQAL SSLDEDDPNI LLAIQLSLQE SGLAIDEEST bmy_09339T0/1-650 SLHDYTPASH SENQDSLQ-- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 SLHDYTPASH SENQDSLQAL SSLDEDDPNI LLAIQLSLQE SGLAINEENR BACU016859/1-1091 SLHDYTPASH SENQDSLQAL SSLDEDDPNI LLAIQLSLQE SGLAINEENR 1001 1050 ENSP00000265742/1-1089 DFLSNEASLG AIGTSLPSRL DSVPRNTDSP RAALSSSELL ELGDSLMRLG ENSBTAP00000053741/1-1091 DFLSNEASLG AIGTSLPSRL DSVPRNTDSP RAALSSSELL ELGDSLMRLG bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 DFLSNEASLG AIGTSLPSRL DSVPRNTDSP RAALSSSELL ELGNSLMRLG BACU016859/1-1091 DFLSNEASLG AIGTSLPSRL DSVPRNTDSP RAALSSSELL ELGNSLMRLG 1051 1100 ENSP00000265742/1-1089 AENDPFSTDT LSSHPLSEAR SDFCPSSSDP DSAGQDPNIN DNLLGNIMAW ENSBTAP00000053741/1-1091 AERDPFSTDT LSSHPPSEAR SEFFPSSSDP DSASQDANIN DNLLGNIMAW bmy_09339T0/1-650 ---------- ---HPQGEN- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 AESDPFSTDT LSSHPLSEVR SEFYPSSSDP DSAGQDANIN DNLLGNIMAW BACU016859/1-1091 AESDPFSTDT LSSHPLSEVR SEFYPSSSDP DSAGQDANIN DNLLGNIMAW 1101 1150 ENSP00000265742/1-1089 FHDMNPQSIA LIPPATTEIS ADSQLPCIKD GSEGVKDVEL VLPEDSMFED ENSBTAP00000053741/1-1091 FHDMNPQSIA LIPPAATEVS ADSQLPCVKD ESEGVRDVEL MPPEDSVFGD bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 FHDMNPQSIA LIPPAATEIS ADSQLPCVKD ESEGVRDVEL MLPEDSVFED BACU016859/1-1091 FHDMNPQSIA LIPPAATEIS ADSQLPCVKD ESEGVRDVEL MPPEDSVFED 1151 1200 ENSP00000265742/1-1089 ASVSEGRGTQ I-EENPLEEN ILAGEAASQA GDSGNEAANR GDGSDVSSQT ENSBTAP00000053741/1-1091 AAISEGRGTQ RGEENALEGN ILAGEAASQA GDSGNEAASK GDGSDVSSQT bmy_09339T0/1-650 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010736/1-1211 AVVSEGRGTQ IEEENPLEGN ILAGETASQA GDSGNEAANK GDGSDVSSQT BACU016859/1-1091 AVVSEGRGTQ IEEENPLEGN ILAGETASQA GNSGNEAASK GDGSDVSSQT 1201 1250 ENSP00000265742/1-1089 PQTSSDWLEQ VHLV ENSBTAP00000053741/1-1091 PQTSSDWPEQ VHLV bmy_09339T0/1-650 ---------- ---- ENSTTRP00000010736/1-1211 PQTSSDWPEQ VHLV BACU016859/1-1091 PQTSSDWPEQ VHLV