KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:51 2014 Check: 00 .. Name: ENSP00000334785/1-214 Len: 260 Check: 8154 Weight: 1.00 Name: ENSTTRP00000010165/1-254 Len: 260 Check: 140 Weight: 1.00 Name: bmy_01412T0/1-195 Len: 260 Check: 8539 Weight: 1.00 Name: BACU013589/1-179 Len: 260 Check: 7478 Weight: 1.00 Name: ENSBTAP00000053746/1-171 Len: 260 Check: 4338 Weight: 1.00 // 1 50 ENSP00000334785/1-214 ---------- ---------- ---------- ---------- ----MGAAHS ENSTTRP00000010165/1-254 KRPRSHPTRN PRLRPVPGVP TCRTRGRTRR CAADASPGPG RDERPRAPAA bmy_01412T0/1-195 ---------- ---------- ---------- ---------- ---------- BACU013589/1-179 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053746/1-171 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000334785/1-214 ASEEVRELEG KTGFSSDQIE QLHRRFKQLS GDQPTI--RK ENFNNVPDLE ENSTTRP00000010165/1-254 GTMGATHSAA ARGLQPSSXX XXXXXXXXXX XXXXXXXXXK ENFNNIPDLE bmy_01412T0/1-195 ---------- -----MNMLS DVCFLFSLFS RCAPSLVPSK ENFNNIPDLE BACU013589/1-179 ---------- -----MALCG KV-------- --------SK ENFNNIPDLE ENSBTAP00000053746/1-171 ---------- ---------- ---------- ---------K ENFNNVPDLE 101 150 ENSP00000334785/1-214 LNPIRSKIVR AFFDNRNLRK GPSGLADEIN FEDFLTIMSY FRPIDTTMDE ENSTTRP00000010165/1-254 LNPIRSKIVR AFFDN-NLRK GPSGLTDEIN FEDFLTIMSY FRPIDTTMDE bmy_01412T0/1-195 LNPIRSKIVR AFFDNRNLRK GPSGLADEIN FEDFLIIMSY FRPIDTTMDE BACU013589/1-179 LNPIRSKIVR AFFDNRNLRK GPSGLADEIN FEDFLTIMSY FRPIDTTMDE ENSBTAP00000053746/1-171 LNPIRSKIVR AFFDNRNLRK GTSGLADEIN FEDFLTIMSY FRPIDTTMDE 151 200 ENSP00000334785/1-214 EQVELSRKEK LRFLFHMYDS DSDGRITLEE YRNVVEELLS GNPHIEKESA ENSTTRP00000010165/1-254 ERVQLCRK-- ---LFHMYDS DSDGRITLEE YRNVVEELLS GNPHIEKESA bmy_01412T0/1-195 EQVQLCRKEK LRFLFHMYDS DSDGRITLEE YRNVVEELLS GNPHIEKESA BACU013589/1-179 EQVQLCRKEK LRFLFHMYDS DSDGRITLEE YRNVVEELLS GNPHIEKESV ENSBTAP00000053746/1-171 EQVQLCRKEK LRFLFHMYDS DSDGRITLEE YRNVVEELLS GNPHIEKESA 201 250 ENSP00000334785/1-214 RSIADGAMME AASVCMGQME PDQVYEGITF EDFLKIWQGI DIETKMHVRF ENSTTRP00000010165/1-254 RSIADGAMME AASVCVGRME PDQVYEGITF DDFLKIWQGI DIETKMHVRF bmy_01412T0/1-195 RSIADGAMME AASVCVGRME PDQVYEGITF DDFLKIWQGI DIETKMHVRF BACU013589/1-179 RSIADGAMME AASVCVGRME PDQVYEGITF DDFLKIWQGI DIETKMHVRF ENSBTAP00000053746/1-171 RSIADGAMME AASVCVGQME PDQVYEGITF DDFLKIWQGI DIETKMHVRF 251 300 ENSP00000334785/1-214 LNMETMALCH ENSTTRP00000010165/1-254 LNMETIALCH bmy_01412T0/1-195 LNVETIALCH BACU013589/1-179 LNVETIALCH ENSBTAP00000053746/1-171 LNMETIALCH