KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:52 2014 Check: 00 .. Name: ENSP00000362427/1-1142 Len: 1154 Check: 8164 Weight: 1.00 Name: ENSBTAP00000053749/1-1130 Len: 1154 Check: 730 Weight: 1.00 Name: ENSTTRP00000008633/1-1136 Len: 1154 Check: 2083 Weight: 1.00 Name: bmy_08895T0/1-1147 Len: 1154 Check: 3562 Weight: 1.00 Name: BACU009657/1-981 Len: 1154 Check: 3873 Weight: 1.00 // 1 50 ENSP00000362427/1-1142 MKEPLLGGEC DKAVASQLGL LDEIKTEPDN AQEYCHRQQS RTQENELKIN ENSBTAP00000053749/1-1130 MKESPTNGDC DKAAVTQVKR PEEIKVEPDN TQEYCQAQQP KTQENDLKIN ENSTTRP00000008633/1-1136 MKESTTDGEC DKAVAPQLKR LDEIKAEPDN AQEYCQAQQP KTQENDLKIN bmy_08895T0/1-1147 MKESTTDGEC DKAVAPQLKR LDEIKAEPDN AQEYCQAQQP RTQENDLKIN BACU009657/1-981 MKESTTDGEC DKAVAPQLKR LDEIKAEPDN AQ-------- ---------- 51 100 ENSP00000362427/1-1142 AVFSESASQL TAGIQLSLAS SGVNKMLPSV STTAIQVSCA GCKKILQKGQ ENSBTAP00000053749/1-1130 SAFSDSAPQI TTGIQLSLAS SGMNKMLPSI STTAVQVSCS GCKKVFQKGQ ENSTTRP00000008633/1-1136 TTFSDNASPM TTGIQLSLAS SGMNKMLPSV STTAIQVSCS GCKKILQKGQ bmy_08895T0/1-1147 TTFSDNASQM TTGIQLSLAS SGMNKMLPSV STTAIQVSCS GCKKILQKGQ BACU009657/1-981 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000362427/1-1142 TAYQRKGSAQ LFCSIPCITE YISSASSPVP SKRTCSNCSK DILNPKDVIS ENSBTAP00000053749/1-1130 TAYQRKGSTE LFCSTPCITE YISSGSSPAL PKRTCSNCSK DILNLKDVIS ENSTTRP00000008633/1-1136 TAYQRKGSTQ LFCSTPCITE YISSLNSPAL PKRTCSNCSK DIVNLKDVIS bmy_08895T0/1-1147 TAYQRKGSTQ LFCSTPCITE YISSLNSPAL PKRTCSNCSK DILNLKDVIS BACU009657/1-981 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000362427/1-1142 VQLEDTTSCK TFCSLSCLSS YEEKRKPFVT ICTNSILTKC SMCQKTAIIQ ENSBTAP00000053749/1-1130 IQLEDTTTSK TFCSQSCLSS YEEKRKPVVT ICANSVSAKC SMCQTTTAIQ ENSTTRP00000008633/1-1136 MQLEDTTTSK TFCSQSCLSS YEEKRKPFDT IC-NSIPAKC SMCQKTTVIQ bmy_08895T0/1-1147 IQLEDTTTSK TFCSQSCLSS YEEKRKPFDT ICTNSIPAKC SMCQKTTVIQ BACU009657/1-981 ---------- ---------- ---------- ---------- --------IQ 201 250 ENSP00000362427/1-1142 YEVKYQNVKH NLCSNACLSK FHSANNFIMN CCENCGTYCY TSSSLSHILQ ENSBTAP00000053749/1-1130 YEVKYQSVKH SLCCNACFSK FHSANNLIMN CCENCGAYCS TSSSMFHILQ ENSTTRP00000008633/1-1136 YEVKYQNMKR SLCSNACFSK FHSANNLIMN CCENCGAYCS TSSSLFHILH bmy_08895T0/1-1147 YEVKYQNMKR SLCSNACFSK FHSANNLIMN CCENCGAYCS TSSSLFHILH BACU009657/1-981 YEVKYQNMKR SLCSNACFSK FHSANNLIMN CCENCGAYCS TSSSLFHILH 251 300 ENSP00000362427/1-1142 MEGQSHYFNS SKSITAYKQK PAKPLISVPC KPLKPSDEMI ETTSDLGKTE ENSBTAP00000053749/1-1130 MEGQSHYFNS SKSITTHKQK PAKSLPPVLC KSLKPTDEMI ETTSDLGKTE ENSTTRP00000008633/1-1136 MEAQSHYFNS SKRITAYKQK PAKTLTSVLC KSLKPSDEMI ETTNDSGKTE bmy_08895T0/1-1147 MEAQSHYFNS SQSITAHKQK PAKTLTSVLC KSLKPSDEMI ETTNDSGKTE BACU009657/1-981 MEAQSHYFNS SKSITAHKQK PAKTLTSVLC KSLKPSDEMI ETTNDSGKTE 301 350 ENSP00000362427/1-1142 LFCSINCFSA YSKAKMESSS V--SVVSVVH DTSTELLSPK KDTTPVISNI ENSBTAP00000053749/1-1130 LFCSINCFSA YSKAKMESST VLSINVSVVR DASTNLPSPK KDATPVISNI ENSTTRP00000008633/1-1136 LFCSVHCFSA YSKAKMESST V---NVSMVH DASTDLLSPK KDTTPVISNI bmy_08895T0/1-1147 LFCSVHCFSA YSKAKMESST V---NVSMVH DASTDLLSPK KDTTPVISNI BACU009657/1-981 LFCSVHCFSA YSKAKMESST V---NVSMVH DASTDLLSPK KDTTPVISNI 351 400 ENSP00000362427/1-1142 VSLADTDVAL PIMNTDVLQD TVSSVTATAD VIVDLSKSSP SEPSNAVASS ENSBTAP00000053749/1-1130 VSLADTHDAL PIVNSDVLQG TVSSV--TAN VIEDI---SP SESSN----- ENSTTRP00000008633/1-1136 VSLADTHEAL PVMNSDVLQG TVSSV--TAN V-EDISKTSP SESSNGVANS bmy_08895T0/1-1147 VSLADTHEAL PVMNSDELQG TVSSV--TAN VVEDISKTSP SESSNGVANS BACU009657/1-981 VSLADTHEAL PVMNSDELQG TVSSV--TAN VVEDISKTSP SESSNGVANS 401 450 ENSP00000362427/1-1142 STEQPSVSPS SSVFSQHAIG SSTEVQKD-- -------NMK SMKISDELCH ENSBTAP00000053749/1-1130 SVQQPSLSPP SSVVSQHTVA LNTEEQKD-- -------NMK SMKKSDRLRH ENSTTRP00000008633/1-1136 NVEQPSLAPS SSVLSQHTTG SSIEVQKD-- -------SMK SMKIRDGLRH bmy_08895T0/1-1147 NVEQPSLSPS SSVLSQHTTG SSIEVQKDHV SNQDATNSMK SMKISDGLRH BACU009657/1-981 NVEQPSLSPS SSVLSQHTTG SSIEVQKDHV SNQDATNSMK SMKISDGLRH 451 500 ENSP00000362427/1-1142 PKCTSKVQKV KGKSRSIKKS CCADFECLEN S-KKDVAFCY SCQLFCQKYF ENSBTAP00000053749/1-1130 PKFTSKIQKV KGKSRSIKKS Y---FQRLEN SIKKDVIFCY SCQLFCQKKF ENSTTRP00000008633/1-1136 PKFTSKVQKV KGKSRSIKKS WCSNFQQLEN SIKKDVIFCY SCQLFCQKKF bmy_08895T0/1-1147 PKFTSKVQKV KGKSRSIKKS WCSNFQQLEN SIKKDVIFCY SCQLFCQKKF BACU009657/1-981 PKFTSKVQKV KGKSRSIKKS WCSNFQQLEN SIKKDVIFCY SCQLFCQKKF 501 550 ENSP00000362427/1-1142 SCGRESFATH GTSNWKKTLE KFRKHEKSEM HLKSLEFWRE YQFCDGAVSD ENSBTAP00000053749/1-1130 NYGRESLRAQ GISHWKKTME KFRKHEKSEM HLKSLQFWRE YQFCDAAVND ENSTTRP00000008633/1-1136 SYGGESFAAQ GISNWKKTLE KFRKHEKSEM HSKSLQFWRE YQFCDEAVND bmy_08895T0/1-1147 SYGGESFAAQ GISNWKKTLE KFRKHEKSEM HSKSLQFWRE YQFCDEAVND BACU009657/1-981 SYGGESFAAQ GISNWKKTLE KFRKHEKSEM HSKSLQFWRE YQFCDEAVND 551 600 ENSP00000362427/1-1142 DLSIHSKQIE GNKKYLKLII ENILFLGKQC LPLRGNDQSV SSVNKGNFLE ENSBTAP00000053749/1-1130 TLSNQSKQIE GNKKYLKLII ENILFLGKQC LFLKGNDQSI SSVNKGNFLE ENSTTRP00000008633/1-1136 SLSNHSKQIE GNKKYLKLII ENILFLGKQC LLLRGNDQSV SSVNKGNFLE bmy_08895T0/1-1147 SLSNHSKQIE GNKKYLKLII ENILFLGKQC LLLRGNDQSV SSVNKGNFLE BACU009657/1-981 SLSNHSKQIE GNKKYLKLII ENILFLGKQC LLLRGNDQSV SPVNKGNFLE 601 650 ENSP00000362427/1-1142 LLEMRAKDKG EETFRLMNSQ VDFYNSTQIQ SDIIEIIKTE MLQDIVNEIN ENSBTAP00000053749/1-1130 LLEIRAKDKG EEIFRLMNSQ VDFYNSTQIQ NDIIEIIKTE ILQDIVNEIN ENSTTRP00000008633/1-1136 LLEIRAKDKG EEIFRLTNSQ VDFYNSTQIQ NDIIEIIKTE MLQDIVNEIN bmy_08895T0/1-1147 LLEIRAKDKG EEIFRLTNSQ VDFYNSTQIQ NDIIEIIKTE MLQDIVNEIN BACU009657/1-981 LLEIRAKDKG EEIFRLTNSQ VDFYNSTQIQ NDIIEIIKTE MLQDIVNEIN 651 700 ENSP00000362427/1-1142 DSSAFSIICD ETINSAMKEQ LSICVRYPQK SSKAILIKER FLGFVDTEEM ENSBTAP00000053749/1-1130 VSSAFSVICD ETTDGATKGQ FSVCVRYPQK TSKAVLIKER FLGFIDVEEM ENSTTRP00000008633/1-1136 VSSAFSIICD ETTDSATKGQ FSICVRYPQK TSKAILIKER FLGFIDVEEM bmy_08895T0/1-1147 VSSAFSIICE ETTDSATKGQ FSICVRYPQK TSKAILIKER FLGFIDVEEM BACU009657/1-981 VSSAFSIICE ETTDSATKGQ FSICVRYPQK TSKAILIKER FLGFIDVEEM 701 750 ENSP00000362427/1-1142 TGTHLHRTIK TYLQQIGVDM DKIHGQAYDS TTNLKIKFNK IAAEFKKEEP ENSBTAP00000053749/1-1130 TGTSLHRSIK AYLQQIGVDL NKIRGQAYDS TSNWKGKLKK IAAEFKKEEP ENSTTRP00000008633/1-1136 TGTNLHRSIK TYLQQIGVDL DKIRGQAYDS TSNWRGKFNK IAAEFKKEEP bmy_08895T0/1-1147 TGTNLHRSIK TYLQQIGVDL DKIRGQAYDS TSNWRGKFNK IAAEFKKEEP BACU009657/1-981 TGTNLHRSIK TYLQQIGVDL DKIRGQAYDS TSNWRGNFNK IAAEFKKEEP 751 800 ENSP00000362427/1-1142 RALYIHCYAH FLDLSIIRFC KEVKELRSAL KTLSSLFNTI CMSGEMLANF ENSBTAP00000053749/1-1130 RALYLHCYTH CLDLAVIRFC KEVKELRSAL NTLSSLFNTI --HGEMSVNF ENSTTRP00000008633/1-1136 RALYLHCYAH FLDLAVIRFC KEVKELRSAL NTLSSLFNTI --HGEMSVNF bmy_08895T0/1-1147 RALYLHCYAH FLDLAVIRFC KEVKELRSAL NTLSSLFSTI --HGEMSVNF BACU009657/1-981 RALYLHCYAH FLDLAVIRFC KEVKELRSAL NTLSSLFSTI --HGEMSVNF 801 850 ENSP00000362427/1-1142 RNIYRLSQNK TCKKHISQSC WTVHDRTLLS VIDSLPEIIE TLEVIASHSS ENSBTAP00000053749/1-1130 QNIYKLSQSK TCKKHISQPC WTVHDNTLLS VIEGLPEIIE TLEVLSNHSS ENSTTRP00000008633/1-1136 QNIYKLSQNK TCKKHTSQSC WTVHDRTLLS VIEGLPEVIE TLEVLSSHSS bmy_08895T0/1-1147 QNIYKLSQNK TCKKHTSQSC WTVHDRTLLS VIEGLPEVIE TLEVLSSHSS BACU009657/1-981 QNIYKLSQNK TCKKHTSQSC WTVHDRTLLS VIEGLPEVIE TLEVLSSHSS 851 900 ENSP00000362427/1-1142 NTSFADELSH LLTLVSKFEF VFCLKFLYRV LSVTGILSKE LQNKTIDIFS ENSBTAP00000053749/1-1130 NTSLADELSD LLAVVSKFEF IFCLKFLYRI LSVTGILSKE FQSETIDIFS ENSTTRP00000008633/1-1136 NTSLADELSD LLALVSKFEF IFCLKFLYRV LSVTGILSKE LQSETIDIFS bmy_08895T0/1-1147 NTSLADELSD LLALVSKFEF IFCLKFLYRV LSVTGILSKE LQSETIDIFS BACU009657/1-981 NTSLADELSD LLALVSKFEF IFCLKFLYRV LSVTGILSKE LQSETIDIFS 901 950 ENSP00000362427/1-1142 LSSKIEAILE CLSSERNDVY FKTIWDGTEE ICQKITCKGF KVEKPSLQKR ENSBTAP00000053749/1-1130 LSSKIEAILE CLSSERNDTY FKTIWDGAEE ICQKITCKGF EVERPSFQKR ENSTTRP00000008633/1-1136 LSSKIEAILE CLSSERNDTY FKTIWDGAEE VCQKITCKGF EVERPSFQKR bmy_08895T0/1-1147 LSSKIEAILE CLSSERNDIY FKTIWDGAEE VCQKITCKGF EVERPSFQKR BACU009657/1-981 LSSKIEAILE CLSSERNDIY FKTIWDGAEE VCQKITCKGF EVERPSFQKR 951 1000 ENSP00000362427/1-1142 RKIQKSVDLG NSDNMFFPTS TEEQYKINIY YQGLDTILQN LKLCFSEFDY ENSBTAP00000053749/1-1130 RKIQKIIDPG NSDSMFFPTS TEEQYKVNIY YQGLDTVLQN LKLCFLEFDY ENSTTRP00000008633/1-1136 RKIQKTIDPS NSDSMFFPTS TEEQYKINIY YQGLDTILQN LKLCFSEFDY bmy_08895T0/1-1147 RKIQKTIDPS NSDSMFFPTS TEEQYKINIY YQGLDTILQN LKLCFSEFDY BACU009657/1-981 RKIQKTIDPS NSDSMFFPTS TEEQYKINIY YQGLDTILQN LKLCFSEFDY 1001 1050 ENSP00000362427/1-1142 CKIKQISELL FKWNEPLNET TAKHVQEFYK LDEDIIPELR FYRHYAKLNF ENSBTAP00000053749/1-1130 CKMKQISELL LKWNEPLNEA TAKDIQEFYK FDADIIPELR FYRHYAKLNF ENSTTRP00000008633/1-1136 CKMKQISELL LKWNEPLNEA TAKDVQEFYK LDADIIPELR FYRQYAKLNF bmy_08895T0/1-1147 CKMKQISELL LKWNEPLNEA TAKDVQEFYK LDADIIPELR FYRQYAKLNF BACU009657/1-981 CKMKQISELL LKWNEPLNEA TAKDVQEFYK LDADIIPELR FYRQYAKLNF 1051 1100 ENSP00000362427/1-1142 VIDDSCINFV SLGCLFIQHG LHSNIPCLSK LLYIALSWPI TSASTENSFS ENSBTAP00000053749/1-1130 VLEYDFINFS NLGHLFIQHG LHNNIPCISK LLYIALSWPV TSASAENSFS ENSTTRP00000008633/1-1136 VLDYDCISFS NLGHLFIQHG LHNNIPCISV LLYIALSWPV TSASVENSFS bmy_08895T0/1-1147 VLDYDCISFS NLGHLFIQHG LHNNIPCISM LLYIALSWPV TSASVENSFS BACU009657/1-981 VLDYDCISFS NLGHLFIQHG LHNNIPCILM LLYIALSWPV TSASVENSFS 1101 1150 ENSP00000362427/1-1142 TLPRLKTYLC NTMGQEKLTG PALMAVEQEL VNKLMEPERL NEIVEKFISQ ENSBTAP00000053749/1-1130 TLSRLKTYLC RTRGQEKLSG LALMAVEQEL VDKLMEPERL NGIVEKFILQ ENSTTRP00000008633/1-1136 TLSRLKTYLC HTRGQEKLSG LALMAVEQEL VNKLMEPERL NGTVEKFILQ bmy_08895T0/1-1147 TLSRLKTYLC HTRGQKKLSG LALMAVEQEL VNKLMEPERL SGTVEKFILQ BACU009657/1-981 TLSRLKTYLC HTRGQEKLSG LALMAVEQEL VNKLMEPERL SGTVEKFILQ 1151 1200 ENSP00000362427/1-1142 MKEI ENSBTAP00000053749/1-1130 VKEI ENSTTRP00000008633/1-1136 VKEI bmy_08895T0/1-1147 VKEI BACU009657/1-981 VKEI