KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:21:59 2014 Check: 00 .. Name: ENSTTRP00000009854/1-1029 Len: 1139 Check: 8277 Weight: 1.00 Name: ENSBTAP00000053760/1-1028 Len: 1139 Check: 6798 Weight: 1.00 Name: ENSP00000389168/1-1030 Len: 1139 Check: 4962 Weight: 1.00 Name: bmy_07445T0/1-1019 Len: 1139 Check: 6891 Weight: 1.00 Name: BACU016398/1-1030 Len: 1139 Check: 4836 Weight: 1.00 // 1 50 ENSTTRP00000009854/1-1029 MKMADAKQKR NEQLKRWIGS ETDLEPPVVK RQKTKVKFDD GAVFLAACSS ENSBTAP00000053760/1-1028 MKMADAKQKR NEQLKRWIGS ETDLEPPVVK RQKTKVKFDD GAVFLAACSS ENSP00000389168/1-1030 MKMADAKQKR NEQLKRWIGS ETDLEPPVVK RQKTKVKFDD GAVFLAACSS bmy_07445T0/1-1019 ---------- ---------- ---------- ---------- ---------- BACU016398/1-1030 MKMADAKQKR NEQLKRWIGS ETDLEPPVVK RQKTKVKFDD GAVFLAACSS 51 100 ENSTTRP00000009854/1-1029 GDTDEVLKLL HRGADINYAN VDGLTALHQA CIDDNVDMVK FLVENGANIN ENSBTAP00000053760/1-1028 GDTDEVLKLL HRGADINYAN VDGLTALHQA CIDDNVDMVK FLVENGANIN ENSP00000389168/1-1030 GDTDEVLKLL HRGADINYAN VDGLTALHQA CIDDNVDMVK FLVENGANIN bmy_07445T0/1-1019 ---------- ---------- ---------- ---------- ---------- BACU016398/1-1030 GDTDEVLKLL HRGADINYAN VDGLTALHQA CIDDNVDMVK FLVENGANIN 101 150 ENSTTRP00000009854/1-1029 QPDNEGWIPL HAAASCGYLD IAEFLIGQGA HVGAVNSEGD TPLDIAEEEA ENSBTAP00000053760/1-1028 QPDNEGWIPL HAAASCGYLD IAEFLIGQGA HVGAVNSEGD TPLDIAEEEA ENSP00000389168/1-1030 QPDNEGWIPL HAAASCGYLD IAEFLIGQGA HVGAVNSEGD TPLDIAEEEA bmy_07445T0/1-1019 ---------- ---------- MERFLIGQGA HVGAVNSEGD TPLDIAEEEA BACU016398/1-1030 QPDNEGWIPL HAAASCGYLD IAEFLIGQGA HVGAVNSEGD TPLDIAEEEA 151 200 ENSTTRP00000009854/1-1029 MEELLQNEVN RQGVDIEAAR KEEERIMLRD ARQWLNSGHI NDVRHAKSGG ENSBTAP00000053760/1-1028 MEELLQNEVN RQGVDIEAAR KEEERIMLRD ARQWLNSGHI NDVRHAKSGG ENSP00000389168/1-1030 MEELLQNEVN RQGVDIEAAR KEEERIMLRD ARQWLNSGHI NDVRHAKSGG bmy_07445T0/1-1019 MEELLQNEVN RQGVDIEAAR KEEERIMLRD ARQWLNSGHI NDVRHAKSGG BACU016398/1-1030 MEELLQNEVN RQGVDIEAAR KEEERIMLRD ARQWLNSGHI NDVRHAKSGG 201 250 ENSTTRP00000009854/1-1029 TALHVAAAKG YTEVLKLLIQ AGYDVNIKDY DGWTPLHAAA HWGKEEACRI ENSBTAP00000053760/1-1028 TALHVAAAKG YTEVLKLLIQ AGYDVNIKDY DGWTPLHAAA HWGKEEACRI ENSP00000389168/1-1030 TALHVAAAKG YTEVLKLLIQ AGYDVNIKDY DGWTPLHAAA HWGKEEACRI bmy_07445T0/1-1019 TALHVAAAKG YTEVLKLLIQ AGYDVNIKDY DGWTPLHAAA HWGKEEACRI BACU016398/1-1030 TALHVAAAKG YTEVLKLLIQ AGYDVNIKDY DGWTPLHAAA HWGKEEACRI 251 300 ENSTTRP00000009854/1-1029 LVDSLCDMEM VNKVGQTAFD VADEDILGYL EELQKKQNLL HSEKREKKSP ENSBTAP00000053760/1-1028 LVDNLCDMEM VNKVGQTAFD VADEDILGYL EELQKKQNLL HSEKREKKSP ENSP00000389168/1-1030 LVDNLCDMEM VNKVGQTAFD VADEDILGYL EELQKKQNLL HSEKRDKKSP bmy_07445T0/1-1019 LVDSLCDMEM VNKVGQTAFD VADEDILGYL EELQKKQNLL HSEKREKKSP BACU016398/1-1030 LVDSLCDMEM VNKVGQTAFD VADEDILGYL EELQKKQNLL HSEKREKKSP 301 350 ENSTTRP00000009854/1-1029 LIESTANMDN NQSQKTFKNK ETLIIEPEKN ASRIESLEQE KVDDEEEGKK ENSBTAP00000053760/1-1028 LIESTANMDN NQSQKTFKNK ETLIIEPEKN ASRIESLEQE KVDDEEEGKK ENSP00000389168/1-1030 LIESTANMDN NQSQKTFKNK ETLIIEPEKN ASRIESLEQE KVDEEEEGKK bmy_07445T0/1-1019 LIESTANMDN NQSQKTFKNK ETLIIEPEKN ASRIESLEQE KVDDEEEGKK BACU016398/1-1030 LIESTANMDN NQSQKTFKNK ETLIIEPEKN ASRIESLEQE KVDDEEEGKK 351 400 ENSTTRP00000009854/1-1029 DESSCSSEED EEDDSESEAE TDKTKSMASV TNANTSSTQA APV-ITTPTV ENSBTAP00000053760/1-1028 DESSCSSEED EEDDSESEAE TDKTKPMASV TNANTSSTQA APVAVTTPTV ENSP00000389168/1-1030 DESSCSSEED EEDDSESEAE TDKTKPLASV TNANTSSTQA APVAVTTPTV bmy_07445T0/1-1019 DESSCSSEED EEDDSESEAE TDKTKSMASV TNANTSSTQA APVAVTTPTV BACU016398/1-1030 DESSCSSEED EEDDSESEAE TDKTKSMASV TNANTSSTQA APVAVTTPTV 401 450 ENSTTRP00000009854/1-1029 SSGQATPTSP IKK------- ---------- ---------- ---------- ENSBTAP00000053760/1-1028 SSGQPTPTSP IKK------- ---------- ---------- ---------- ENSP00000389168/1-1030 SSGQATPTSP IKK------- ---------- ---------- ---------- bmy_07445T0/1-1019 SSGQATPTSP IKKYDFIAPI MPVVESVDPA SWRQGLRKTG IVLVPSKGEK BACU016398/1-1030 SSGQATPTSP IKK------- ---------- ---------- ---------- 451 500 ENSTTRP00000009854/1-1029 --FPTSATKI SPKEEERKDE SPASWRLGLR KTGSYGALAE ITASKEAQKE ENSBTAP00000053760/1-1028 --FPASATKI SPKEEERKDE SPASWRLGLR KTGSYGALAE ITASKEAQKE ENSP00000389168/1-1030 --FPTTATKI SPKEEERKDE SPATWRLGLR KTGSYGALAE ITASKEGQKE bmy_07445T0/1-1019 SMFPTSATKI SPKEEERKDE SPASWRLGLR KTGSYGALAE ITASKEAQKE BACU016398/1-1030 --FPTSATKI SPKEEERKDE SPASWRLGLR KTGSYGALAE ITASKEAQKE 501 550 ENSTTRP00000009854/1-1029 KDTAGVMRSA SSPRLSSSLD NKEKEKDSKG TRLAYVAPTI PRRLASTSDI ENSBTAP00000053760/1-1028 KDTAGVMRSA SSPRLSSSLD NKEKEKDSKG TKLAYVTPTI PRRLASTSDI ENSP00000389168/1-1030 KDTAGVTRSA SSPRLSSSLD NKEKEKDSKG TRLAYVAPTI PRRLASTSDI bmy_07445T0/1-1019 KDTAGVMRSA SSPRLSSSLD NKEKEKDSKG TRLAYVAPTI PRRLASTSDI BACU016398/1-1030 KDTAGVMRSA SSPRLSSSLD NKEKEKDSKG TRLAYVAPTI PRRLASTSDI 551 600 ENSTTRP00000009854/1-1029 EEKENRDSSS LRTSSSYTRR KWEDDLKKNS SINEGSAYHK XXXXXXXXXX ENSBTAP00000053760/1-1028 EEKENRDSSS LRTSSSYTRR KWEDDLKKNS SINEGSTYHK SCSFGRRQDD ENSP00000389168/1-1030 EEKENRDSSS LRTSSSYTRR KWEDDLKKNS SVNEGSTYHK SCSFGRRQDD bmy_07445T0/1-1019 EEKENRDSSS LRTSSSYTRR KWEDDLKKNS SINEGSTYHK SCSFGRRQDD BACU016398/1-1030 EEKENRDSSS LRTSSSYTRR KWEDDLKKNS SINEGSTYHK SCSFGRRQDD 601 650 ENSTTRP00000009854/1-1029 XXXXXXXXXX XXXXXXXXAG LQKSLLSSTS TTTKITTGSS SAGTQSSTSN ENSBTAP00000053760/1-1028 LISSSVPSTT STPTVTSAAG LQKSLLSSTS TTTKITTGSS SAGTQSSTSN ENSP00000389168/1-1030 LISSSVPSTT STPTVTSAAG LQKSLLSSTS TTTKITTGSS SAGTQSSTSN bmy_07445T0/1-1019 LISSSVPSTT STPTVTSAAG LQKSLLSSTS TTTKITTGSS SAGTQSSTSN BACU016398/1-1030 LISSSVPSTT STPTVTSAAG LQKSLLSSTS TTTKITTGSS SAGTQSSTSN 651 700 ENSTTRP00000009854/1-1029 RLWAEDSTEK EKDSVPTAVT IPVAPTVVNA AASTTTLTTT TAGTVSSTSE ENSBTAP00000053760/1-1028 RLWAEDSTEK EKDSVPTAVT IPVAPTVVNA AASTTTLTTT TAGTVSSTAE ENSP00000389168/1-1030 RLWAEDSTEK EKDSVPTAVT IPVAPTVVNA AASTTTLTTT TAGTVSSTTE bmy_07445T0/1-1019 RLWAEDSTEK EKDSVPTAVT IPVAPTVVNA AASTTTLTTT TAGTVSSTSE BACU016398/1-1030 RLWAEDSTEK EKDSVPTAVT IPVAPTVVNA AASTTTLTTT TAGTVSSTSE 701 750 ENSTTRP00000009854/1-1029 VRERRXXXXX XXRDEESESQ RKARSRQARQ SRRSTQGVTL TDLQEAEKTI ENSBTAP00000053760/1-1028 VRERRRSYLT PVRDEESESQ RKARSRQARQ SRRSTQGVTL TDLQEAEKTI ENSP00000389168/1-1030 VRERRRSYLT PVRDEESESQ RKARSRQARQ SRRSTQGVTL TDLQEAEKTI bmy_07445T0/1-1019 VRERRRSYLT PVRDEESESQ RKARSRQARQ SRRSTQGVTL TDLQEAEKTI BACU016398/1-1030 VRERRRSYLT PVRDEESESQ RKARSRQARQ SRRSTQGVTL TDLQEAEKTI 751 800 ENSTTRP00000009854/1-1029 GRSRSTRTRE QENEEKEKEE KEKQDKEKQE EKKESETSRE DEYKQKYSRT ENSBTAP00000053760/1-1028 GRSRSTRTRE QENE--EKEE KEKQDKEKQE EKKESETSRE DEYKQKYSRT ENSP00000389168/1-1030 GRSRSTRTRE QENEEKEKEE KEKQDKEKQE EKKESETSRE DEYKQKYSRT bmy_07445T0/1-1019 GRSRSTRTRE QENEEKEKEE KEKQDKEKQE EKKESETSRE DEYKQKYSRT BACU016398/1-1030 GRSRSTRTRE QENEEKEKEE KEKQDKEKQE EKKESETSRE DEYKQKYSRT 801 850 ENSTTRP00000009854/1-1029 YDETYQRYRP VSTSSSTTPS SSLSTMSSSL YASSQLNRPN SLVGITSAYS ENSBTAP00000053760/1-1028 YDEAYQRYRP VSTSSSTTPS SLLSTMSSSL YASSQLNRPN SLVGITSAYS ENSP00000389168/1-1030 YDETYQRYRP VSTSSSTTPS SSLSTMSSSL YASSQLNRPN SLVGITSAYS bmy_07445T0/1-1019 YDETYQRYRP VSTSSSTTPS SSLSTMSSSL YASSQLNRPN SLVGITSAYS BACU016398/1-1030 YDETYQRYRP VSTSSSTTPS SSLSTMSSSL YASSQLNRPN SLVGITSAYS 851 900 ENSTTRP00000009854/1-1029 RGLTKENERE GEKREEEKEG EDKSQPKSIR ERRRPREKRR STGVSFWTQD ENSBTAP00000053760/1-1028 RGLTKENERE GEKKEEEKEG EDKSQPKSIR ERRRPREKRR STGVSFWTQD ENSP00000389168/1-1030 RGITKENERE GEKREEEKEG EDKSQPKSIR ERRRPREKRR STGVSFWTQD bmy_07445T0/1-1019 RGLTKENERE GEKREEEKEG EDKSQPKSIR ERRRPREKRR STGVSFWTQD BACU016398/1-1030 RGLTKENERE GEKREEEKEG EDKSQPKSIR ERRRPREKRR STGVSFWTQD 901 950 ENSTTRP00000009854/1-1029 SDENEQEQQS DTEEGSNKKE TQVNNIIXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000053760/1-1028 SDENEQEQQS DTEEGSNKKE VQTDSISRYE ISSTSASDRY DSLLGRSGSY ENSP00000389168/1-1030 SDENEQEQQS DTEEGSNKKE TQTDSISRYE TSSTSAGDRY DSLLGRSGSY bmy_07445T0/1-1019 SDENEQEQQS DTEEGSNKKE TQTDSISRYE ISSTSASDRY DSLLGRSGSY BACU016398/1-1030 SDENEQEQQS DTEEGSNKKE TQTDSISRYE ISSTSASDRY DSLLGRSGSY 951 1000 ENSTTRP00000009854/1-1029 XXXXXXXXXX XXXXXXXXXX XXXLYEQILA ENEKLKAQLH DTNMELTDLK ENSBTAP00000053760/1-1028 SYSEERKPYS SRLEKDDSTD FKKLYEQILA ENEKLKAQLH DTNMELTDLK ENSP00000389168/1-1030 SYLEERKPYS SRLEKDDSTD FKKLYEQILA ENEKLKAQLH DTNMELTDLK bmy_07445T0/1-1019 SYSEERKPYS SXLEKDDSTD FKKLYEQILA ENEKLKAQLH DTNMELTDLK BACU016398/1-1030 SYSEERKPYS SRLEKDDSTD FKKLYEQILA ENEKLKAQLH DTNMELTDLK 1001 1050 ENSTTRP00000009854/1-1029 LQLEKATQRQ ERFADRSLLE MEKRERRALE RRISEMEEEL KMLPDLKADN ENSBTAP00000053760/1-1028 LQLEKATQRQ ERFADRSLLE MEKRTEDCTE KNRTKTHTEM QLLYSVKADN ENSP00000389168/1-1030 LQLEKATQRQ ERFADRSLLE MEKRERRALE RRISEMEEEL KMLPDLKADN bmy_07445T0/1-1019 LQLEKATQRQ ERFADRSLLE MEKRERRALE RRISEMEEEL KMLPDLKADN BACU016398/1-1030 LQLEKATQRQ ERFADRSLLE MEKRERRALE RRISEMEEEL KMLPDLKADN 1051 1100 ENSTTRP00000009854/1-1029 QRLKDENGAL IR-------- ---------- VISKLSK--- ---------- ENSBTAP00000053760/1-1028 QRLKDENGAL IR-------- ---------- VISKLSK--- ---------- ENSP00000389168/1-1030 QRLKDENGAL IR-------- ---------- VISKLSK--- ---------- bmy_07445T0/1-1019 QRLKDENGAL IRYKMLDSLI FTFILAGYLF FVSKTEQLLC YIDFIGSIEQ BACU016398/1-1030 QRLKDENGAL IR-------- ---------- VISKLSK--- ---------- 1101 1150 ENSTTRP00000009854/1-1029 ---------- ---------- ---------- --------- ENSBTAP00000053760/1-1028 ---------- ---------- ---------- --------- ENSP00000389168/1-1030 ---------- ---------- ---------- --------- bmy_07445T0/1-1019 TLFLHETSCK THYFGNKNAE EKKRRKCDCF FLEYIKAKF BACU016398/1-1030 ---------- ---------- ---------- ---------