KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:22:01 2014 Check: 00 .. Name: ENSBTAP00000053765/1-940 Len: 950 Check: 562 Weight: 1.00 Name: bmy_18050T0/1-707 Len: 950 Check: 5767 Weight: 1.00 Name: ENSTTRP00000008145/1-939 Len: 950 Check: 5822 Weight: 1.00 Name: BACU015647/1-491 Len: 950 Check: 956 Weight: 1.00 // 1 50 ENSBTAP00000053765/1-940 MARGSALRWL CVPAVWAVAA LLLCVSRASG QAEVPDSSDP LGQLDGHDSP bmy_18050T0/1-707 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008145/1-939 MARGLALPLL CVPSVWAAAA LLLCVSGTSX XXXXXXXXXX XXXXXXXXXX BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000053765/1-940 VPTLKGYFLN FLEPVNNITI VQGQTAILHC KVAGNPPPSV RWLKNDAPVV bmy_18050T0/1-707 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008145/1-939 XXXXXXYFLN FLEPVNNITI VQGQTAILHC KVAGNPPPSV RW-ENDAPVV BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000053765/1-940 QEPRRVIIRK TEYGSRLRIQ DLDTTDTGYY QCVATNGVKT ITATGVLFVR bmy_18050T0/1-707 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008145/1-939 QEPRRIIIRX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000053765/1-940 LGPTHSPNHN FQDDYHEDGF CQPYRGIACA RFIGNRTIYV DSLQMQGEIE bmy_18050T0/1-707 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008145/1-939 XXPTHSPNHN FQDDYHEDGF CQPYRGIACA RFIGNRTIYV DSLQMQGEIE BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000053765/1-940 NRITAAFTMI GTSTHLSDQC SQFAIPSFCH FVFPLCDARS RAPKPRELCR bmy_18050T0/1-707 ---------- ---------- ---------- ---------- ---KPRELCR ENSTTRP00000008145/1-939 NRITAAFTMI GTSTHLSDQC SQFAIPSFCH FVFPLCDARS RAPKPRELCR BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000053765/1-940 DECEVLESDL CRQEYTIARS NPLILMRLQL PKCEALPMPE SPDAANCMRI bmy_18050T0/1-707 DECEVLESDL CRQEYTIARS NPLILMRLQL PKCEALPMPE SPDAANCMRI ENSTTRP00000008145/1-939 DECEVLESDL CRQEYTIARS NPLILMRLQL PKCEALPMPE SPDAANCMRI BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000053765/1-940 GIPAERLGRY HQCYNGSGTD YRGTASTTKS GHQCQPWALQ HPHSHHLTST bmy_18050T0/1-707 GIPAERLGRY HQCYNGSGTD YRGTASTTKS GHQCQPWALQ HPHNHHLTSA ENSTTRP00000008145/1-939 GIPAERLGRY HQCYNGSGTD YRGTASTTKS GHQCQPWALQ HPHSHHLTSA BACU015647/1-491 --------MF HRSFSS---- ---------- ---------- ---------- 351 400 ENSBTAP00000053765/1-940 DFPELGGGHA YCRNPGGQME GPWCFTQNKN VRMELCDVPS CSPQDSSRMG bmy_18050T0/1-707 DFPELGGGHA YCRNPGGQME GPWCFTQNKN VRMELCDVPS CSPQDSSRMG ENSTTRP00000008145/1-939 DFPELGGGHA YCRNPGGQME GPWCFTQNKN VRMELCDVPS CSPQDSSRMG BACU015647/1-491 ---------- ---------- --W------- ---------- ---------- 401 450 ENSBTAP00000053765/1-940 ILYILVPSIA IPLVIACLFF LVCMCRNKQK ASASTPQRRQ LMASPSQDVE bmy_18050T0/1-707 ILYILVPSIA IPLVIACLFF LVCMCRNKQK ASSSTPQRRQ LMASPSQDVE ENSTTRP00000008145/1-939 ILYILVPSIA IPLVIACLFF LVCMCRNKQK ASSSTPQRRQ LMASPSQDVE BACU015647/1-491 ---------- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000053765/1-940 MPLINQHK-- --------QA KLKEISLSTV RFMEELGEGR FGKVYKGHLF bmy_18050T0/1-707 MPLINQHKQM FHRSFSSWQA KLKEISLSTV RFMEELGEDR FGKVYKGHLF ENSTTRP00000008145/1-939 MPLISQHK-- --------QA KLKEISLSTV RFMEELGEDR FGKVYKGHLF BACU015647/1-491 ---------- --------QA KLKEISLSTV RFMEELGEDR FGKVYKGHLF 501 550 ENSBTAP00000053765/1-940 GPAPGEQTQA VAIKTLKDKA EGPLREEFRH EALLRARLQH PNIVCLLGVV bmy_18050T0/1-707 GPAPGEQTQA VAIKTLKDKA EGPLREEFRQ EALLRARLQH PNIVCLLGMV ENSTTRP00000008145/1-939 GPAPGEQTQA VAIKTLKDKA EGPLREEFRH EALLRARLQH PNIVCLLGVV BACU015647/1-491 GPAPGEQTQA VAIKTLKDKA EGPLREEFRH EALLRARLQH PNIVCLLGMV 551 600 ENSBTAP00000053765/1-940 TKDQPLSMIF SYCPHGDLHE FLVMRSPHSD VGSTDDDRTV KSALEPPDFV bmy_18050T0/1-707 TKDQPLSMIF SYCSHGDLHE FLVMRSPHSD VGSTDDDRTV KSALEPPDFV ENSTTRP00000008145/1-939 TKDQPLSMIF SYCSHGDLHE FLVMRSPHSD VGSTDDDRTV KSALEPPDFV BACU015647/1-491 TKDQPLSMIF SYCSHGDLHE FLVMRSPHSD VGSTDDDRTV KSALEPPDFV 601 650 ENSBTAP00000053765/1-940 HVVAQIAAGM EYLSSHHVVH KDLATRNVLV YDKLTVKISD LGLFREVYSA bmy_18050T0/1-707 HVVAQIAAGM EYLSSHHVVH KDLATRNVLV YDKLTVKISD LGLFREVYSA ENSTTRP00000008145/1-939 HVVAQIAAGM EYLSSHHVVH KDLATRNVLV YDKLTVKISD LGLFREVYSA BACU015647/1-491 HVVAQIAAGM EYLSSHHVVH KDLATRNVLV YDKLTVKISD LGLFREVYSA 651 700 ENSBTAP00000053765/1-940 DYYKLTGNAL LPIRWMSPEA IMYGKFSVDS DIWSYGVVLW EVFSYGLQPY bmy_18050T0/1-707 DYYKLTGSAL LPIRWMSPEA IMYGKFSVDS DIWSYGVVLW EVFSYGLQPY ENSTTRP00000008145/1-939 DYYKLTGSAL LPIRWMSPEA IMYGKFSVDS DIWSYGVVLW EVFSYGLQPY BACU015647/1-491 DYYKLTGSAL LPIRWMSPEA VMYGKFSVDS DIWSYGVVLW EVFSYGLQPY 701 750 ENSBTAP00000053765/1-940 CGHSNQDVVE MVRSRQVLPC PDDCPAWVYA LMIECWHEFP SRRPRFKDIH bmy_18050T0/1-707 CGHSNQDVVE MVRSRQVLPC PDDCPAWVYA LMIECWHEFP SRRPRFKDIH ENSTTRP00000008145/1-939 CGHSNQDVVE MVRSRQVLPC PDDCPAWVYA LMIECWHEFP SRRPRFKDIH BACU015647/1-491 CGHSNQDVVE MVRSRQVLPC PDDCPAWVYA LMIECWHEFP SRRPRFKDIH 751 800 ENSBTAP00000053765/1-940 SRLRAWGNLS TYNSSAQTSG ASNATQTSSL STSPVSNVSN ARYGGPKQKA bmy_18050T0/1-707 SRLRAWGNLS TYNSSGQTSG ASNVTQTSSL STSPVSNVSN TRYGGPKQKA ENSTTRP00000008145/1-939 SRLRAWGNLS TYNSSGQTSG ASNVTQTSSL STSPVSNVSN TRYGGPKQKA BACU015647/1-491 SRLRAWGNLS TYNSSGQTSG ASNVTQTSSL STSPVSNVSN TRYGGPKQKA 801 850 ENSBTAP00000053765/1-940 QPFPQPQFIP MKGQIRPMVP PPQLYIPVNG YQPVPAYGAY LPNFYPVQIP bmy_18050T0/1-707 QPFPQPQFIP MKGQIRPMVP PPQLYIPVNG YQPVPAYGAY LPNFYPVQIP ENSTTRP00000008145/1-939 QPFPQPQFIP MKGQIRPMVP PPQLYIPVNG YQPVPAYGAY LPNFYPVQIP BACU015647/1-491 QPFPQPQFIP MKGQIRPMVP PPQLYIPVNG YQPVPAYGAY LPNFYPVQIP 851 900 ENSBTAP00000053765/1-940 MQMAPQQVPA QMVPKPGSHH SGSGSTSTGY VTTAPSNTSV ADRAALLSEG bmy_18050T0/1-707 MQMAPQQVPA QMVPKPGSHH SGSGSTSTGY VTTAPSNTSV ADRAALLSEG ENSTTRP00000008145/1-939 MQMAPQQVPP QMVPKPGSHH SGSGSTSTGY VTTAPSNTSV ADRAALLSEG BACU015647/1-491 MQMAPQQVPA QMVPKPGSHH SGSGSTSTGY VTTAPSNTSV ADRAALLSEG 901 950 ENSBTAP00000053765/1-940 TEDAQNVPED MAQSPVQEAE EEEDGSVPET ELLGDNDTLQ MSEAEVQLEA bmy_18050T0/1-707 TEDTQNVPED MAQSPVQEAE EEEDGSVPET ELLGDNDTLQ MDESEVQLEA ENSTTRP00000008145/1-939 TEDTQNVPED VAQSPVQEAE EEEDGSVPET ELLGDNDTLQ MDESEVQLEA BACU015647/1-491 TEDTQNVPED VAQSPVQEAE EEEDGSVPET ELLGDNDTLQ MDESEVQLEA