KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:05 2014 Check: 00 .. Name: bmy_21832T0/1-421 Len: 894 Check: 3891 Weight: 1.00 Name: ENSP00000453076/1-515 Len: 894 Check: 9216 Weight: 1.00 Name: BACU008541/1-830 Len: 894 Check: 209 Weight: 1.00 Name: ENSTTRP00000000030/1-515 Len: 894 Check: 7424 Weight: 1.00 Name: ENSBTAP00000053774/1-515 Len: 894 Check: 9451 Weight: 1.00 // 1 50 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- ---------- ENSP00000453076/1-515 MGHNGSWISP NASEPHNASG AEAAGVNRSA LGEFGEAQLY RQFTTTVQVV BACU008541/1-830 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000030/1-515 MGHNGSWISR NASEPRNASG AGAEGANRSA LGEFGEAQLY RQFTTTVQVV ENSBTAP00000053774/1-515 MGHNGSWISR NASEPRNASS AEVAGANRSA LGEFGEAQLY RQFTTTVQVV 51 100 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- -------MLV ENSP00000453076/1-515 IFIGSLLGNF MVLWSTCRTT VFKSVTNRFI KNLACSGICA SLVCVPFDII BACU008541/1-830 ---------- MVLWSTCRTT VFKSVTNRFI KNLACSGICA SLVCVPFDII ENSTTRP00000000030/1-515 IFIGSLLGNF MVLWSTCRTT VFKSVTNRFI KNLACSGICA SLVCVPFDII ENSBTAP00000053774/1-515 IFIGSLLGNF MVLWSTCRTT VFKSVTNRFI KNLACSGICA SLVCVPFDII 101 150 bmy_21832T0/1-421 ISMHIHCGTS LLWICVQTHF LSLSGFENCP QAPLAQMNF- ACAFGRYYSV ENSP00000453076/1-515 LSTSPHCC-- --WWIYTMLF CKVVKFLHKV FCSVTILSFP AIALDRYYSV BACU008541/1-830 LSTSPHCC-- --WWIYTMLF CKVVKFLHKV FCSVTILSFP AIALDRYYSV ENSTTRP00000000030/1-515 LSTSPHCC-- --WWIYTMLF CKVVKFLHKV FCSVTILSFP AIALDRYYSV ENSBTAP00000053774/1-515 LSTSPHCC-- --WWIYTMLF CRVVKFLHKV FCSVTILSFP AIALDRYYSV 151 200 bmy_21832T0/1-421 LYPLERKISD AKSRELVIYI WAHAVVASVP VFAVTNVADI YAMSTCTEVW ENSP00000453076/1-515 LYPLERKISD AKSRELVMYI WAHAVVASVP VFAVTNVADI YATSTCTEVW BACU008541/1-830 LYPLERKISD AKSRELVIYI WAHAVVASVP VFVVTNVADI YATSTCTEVW ENSTTRP00000000030/1-515 LYPLERKISD AKSRELVIYI WAHAVVASVP VFAVTNVADI YAMSTCTEVW ENSBTAP00000053774/1-515 LYPLERKISD AKSRELVIYI WAHAVVASVP VFAVTNVADI YAMSTCTEVW 201 250 bmy_21832T0/1-421 SNSLGHLVYV LVYNVTTVIV PVAVVFLFLI LIRRALSASQ KKKVIIAALR ENSP00000453076/1-515 SNSLGHLVYV LVYNITTVIV PVVVVFLFLI LIRRALSASQ KKKVIIAALR BACU008541/1-830 SNSLGHLVYV LVYNVTTVIV PVAVVFLFLI LIRRALSASQ KKKVIIAALR ENSTTRP00000000030/1-515 SNSLGHLVYV LVYNITTVIV PVAVVFLFLI LIRRALSASQ KKKVIIAALR ENSBTAP00000053774/1-515 SNSLGHLVYV LVYNVTTVIV PVAVVFFFLI LIRRALSASQ KKKVIIAALR 251 300 bmy_21832T0/1-421 TPQNTISIPY ASQREAELHA TLLSMVMVFI LCSVPYATLV VYQTVLNVPD ENSP00000453076/1-515 TPQNTISIPY ASQREAELHA TLLSMVMVFI LCSVPYATLV VYQTVLNVPD BACU008541/1-830 TPQNTISIPY ASQREAELHA TLLSMVIVFI LCSVPYATLV VYQTVLNVPD ENSTTRP00000000030/1-515 TPQNTISIPY ASQREAELHA TLLSMVMVFI LCSVPYATLV VYQTVLNVPN ENSBTAP00000053774/1-515 TPQNTISIPY ASQREAELHA MLLSMVMVFI LCSVPYATLV VYQTVLNVPN 301 350 bmy_21832T0/1-421 TSVFLLLTAI WLPKVSLLAN PVLFLTVNKS IRKCLVGTLV QLHHRYSRRN ENSP00000453076/1-515 TSVFLLLTAV WLPKVSLLAN PVLFLTVNKS VRKCLIGTLV QLHHRYSRRN BACU008541/1-830 TSVFLLLTAI WLPKVSLLAN PVLFLTVNKS IRKCLVGTLV QLHHRYSRRN ENSTTRP00000000030/1-515 TSVFLLLTAI WLPKVSLLAN PVLFLTVNKS IRKCLVGTLV QLHHRYSRRN ENSBTAP00000053774/1-515 TSIFLLLTAI WLPKVSLLAN PVLFLTVNKS VRKCLVGTLV QLHHRYSRRN 351 400 bmy_21832T0/1-421 VVGTGSGMAD ASLEPSMRSG SQLLEMFHIG QQQIFKPTDD EEESEAKYAG ENSP00000453076/1-515 VVSTGSGMAE ASLEPSIRSG SQLLEMFHIG QQQIFKPTED EEESEAKYIG BACU008541/1-830 VVGTGSGVAD ASLEPSMRSG SQLLEMFHIG QQQIFKPTDD EEESEAKYAS ENSTTRP00000000030/1-515 VVGTGSGVAD ASLEPSMRSG SQLLEMFHIG QQQIFKPTDD EEESEAKYAG ENSBTAP00000053774/1-515 VVGTGSGMAD ASLEPSMRSG SQLLEMFHIG QQQIFKPTED EEESEAKYPG 401 450 bmy_21832T0/1-421 SADLQARELL PTCLEAEQGP RFATPAPPPG TVDSISQVAP AVPVEPETFP ENSP00000453076/1-515 SADFQAKEIF STCLEGEQGP QFAPSAPPLS TVDSVSQVAP AAPVEPETFP BACU008541/1-830 SADLQARELL PTCLEAERGS RFATPAPPPG TVDSISQVAP AVPVEPETFP ENSTTRP00000000030/1-515 SADLQARELL PTCLEAEQGP RFATPAPPPG TVDSISQVAP AVPVEPETFP ENSBTAP00000053774/1-515 SGALQAKELL PTCLEAELGP QFATPTPPPG TVDSISQVAP AVSVESETFP 451 500 bmy_21832T0/1-421 DRYSLQFGFG PFELPPQWLS ETRNSKKRLL PPLGNTPEEL IQTKMPKVG- ENSP00000453076/1-515 DKYSLQFGFG PFELPPQWLS ETRNSKKRLL PPLGNTPEEL IQTKVPKVG- BACU008541/1-830 DRYSLQFGFG PFELPPQWLS ETRNSKKRLL PPLGNTPEEL IQTKMPKVTE ENSTTRP00000000030/1-515 DRYSLQFGFG PFELPPQWLS ETRNSKKRLL PPLGNTPEEL IQTKMPKVG- ENSBTAP00000053774/1-515 DKYSLQFGFG PFELPPQWLS ETRNSKKRLL PPLGNTPEEL IQTKMPKVG- 501 550 bmy_21832T0/1-421 ---------- ----RVER-- ---------- ---------- ---------- ENSP00000453076/1-515 ---------- ----RVER-- ---------- ---------- ---------- BACU008541/1-830 LPQATNVWSQ QYNQRVKRSV TVREFSKKRV DTAIHLNSGK EAHSEGSSNT ENSTTRP00000000030/1-515 ---------- ----RVER-- ---------- ---------- ---------- ENSBTAP00000053774/1-515 ---------- ----RVER-- ---------- ---------- ---------- 551 600 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- ---------- ENSP00000453076/1-515 ---------- ---------- ---------- ---------- ---------- BACU008541/1-830 EEGRNSNDDK GENYSEKIKL AEEGPDEDSN LVQHQIIPEC SDESELKELD ENSTTRP00000000030/1-515 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053774/1-515 ---------- ---------- ---------- ---------- ---------- 601 650 bmy_21832T0/1-421 --------KM SRNNKV---- ---------- ---------- ---------- ENSP00000453076/1-515 --------KM SRNNKV---- ---------- ---------- ---------- BACU008541/1-830 SQLQDAIQKM KRLDKILVKR QHREKEIQKQ GLEMRIKLWE KLKSAKNGET ENSTTRP00000000030/1-515 --------KM SRNNKV---- ---------- ---------- ---------- ENSBTAP00000053774/1-515 --------KM SRNNKV---- ---------- ---------- ---------- 651 700 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- ---------- ENSP00000453076/1-515 ---------- ---------- ---------- ---------- ---------- BACU008541/1-830 LQSNEEMEST GNFLALTAAS EETVDPSCYE REDTFFSVFH TQVPPEDYEN ENSTTRP00000000030/1-515 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053774/1-515 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- ---------- ENSP00000453076/1-515 ---------- ---------- ---------- ---------- ---------- BACU008541/1-830 CIQNVNKDFT YGVERNESLI KAEKKPFSNT EKIELRGKHS QDFIKRNIEL ENSTTRP00000000030/1-515 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053774/1-515 ---------- ---------- ---------- ---------- ---------- 751 800 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- ---------- ENSP00000453076/1-515 ---------- ---------- ---------- ---------- ---------- BACU008541/1-830 AKNSGQPVVM IDREKKRLVE LLKDLDNSDS GLSSSEGDQS GWLVLGEGYT ENSTTRP00000000030/1-515 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053774/1-515 ---------- ---------- ---------- ---------- ---------- 801 850 bmy_21832T0/1-421 ---------- ---------- SIFPKVDS-- ---------- ---------- ENSP00000453076/1-515 ---------- ---------- SIFPKVDS-- ---------- ---------- BACU008541/1-830 PAVTQHQQLA EIDTKLQELS AVYPTISSSS PRPEHQNDEE PDLNGDDRNT ENSTTRP00000000030/1-515 ---------- ---------- SIFPKVDS-- ---------- ---------- ENSBTAP00000053774/1-515 ---------- ---------- SIFPKVDS-- ---------- ---------- 851 900 bmy_21832T0/1-421 ---------- ---------- ---------- ---------- ---- ENSP00000453076/1-515 ---------- ---------- ---------- ---------- ---- BACU008541/1-830 EITPGEKVLR NTKEQRDQQN RLREIDEKLR KMKENVGRLS NSIP ENSTTRP00000000030/1-515 ---------- ---------- ---------- ---------- ---- ENSBTAP00000053774/1-515 ---------- ---------- ---------- ---------- ----