KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:09 2014 Check: 00 .. Name: ENSP00000286657/1-1205 Len: 1211 Check: 898 Weight: 1.00 Name: ENSTTRP00000012462/1-1181 Len: 1211 Check: 6102 Weight: 1.00 Name: ENSBTAP00000053777/1-1207 Len: 1211 Check: 4437 Weight: 1.00 Name: BACU015740/1-789 Len: 1211 Check: 7672 Weight: 1.00 Name: bmy_20724T0/1-829 Len: 1211 Check: 2492 Weight: 1.00 // 1 50 ENSP00000286657/1-1205 MVLLSLWLIA AALVEVRTSA DGQAGNEEMV QIDLPIKRYR EYELVTPVST ENSTTRP00000012462/1-1181 ---------- ---------- -GQAGNEEMV QIDLPIKRQR EYELVTPVST ENSBTAP00000053777/1-1207 MVLLSLWLIA AALVEVKTSA DGQAGNEEMV QIDLPIKRQR EYELVTPVST BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000286657/1-1205 NLEGRYLSHT LSASHKKRSA RDVSSNPEQL FFNITAFGKD FHLRLKPNTQ ENSTTRP00000012462/1-1181 NFEGHYLSHI LSANHKKRSA RDVSSNSEQL FFNITAFGRD FHLRLKPNTQ ENSBTAP00000053777/1-1207 NFEGHYLSHI LSANHKKRST RDVSSNSEQL FFNITAFGRD FHLRLKPNTQ BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000286657/1-1205 LVAPGAVVEW HETSLVPGNI TDPINNHQPG SATYRIRRTE PLQTNCAYVG ENSTTRP00000012462/1-1181 LVAPGAVVEW HEASLVPGNI TDRINDHQPG SASERIWKTE PLQTNCAYVG ENSBTAP00000053777/1-1207 LVAPGAVVEW HEASPVPGNI TDPINDHQPG STSERIWKTE PLQTNCAYVG BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000286657/1-1205 DIVDIPGTSV AISNCDGLAG MIKSDNEEYF IEPLERGKQM EEEKGRIHVV ENSTTRP00000012462/1-1181 DIMDIPGTSV AISNCDGLAG MIKGDNDEYF IEPLERGKQM EEEKGRIHVV ENSBTAP00000053777/1-1207 DIMDIPGTSV AISNCDGLAG MIKSDNDEYF IEPLERGKQM EEEKGRIHVV BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000286657/1-1205 YKRSAVEQAP IDMSKDFHYR ESDLEGLDDL GTVYGNIHQQ LNETMRRRRH ENSTTRP00000012462/1-1181 YKRSAVERAP IDMSQDFHYR ESDLEGLDDL GTVYSNIDQQ LNEAMRRRRH ENSBTAP00000053777/1-1207 YKRSAVERAP IDMSQDFHYR ESDLEGLDDL GTVYSSIDQQ LNETMRRRRH BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000286657/1-1205 AGENDYNIEV LLGVDDSVVR FHGKEHVQNY LLTLMNIVNE IYHDESLGVH ENSTTRP00000012462/1-1181 AGENDYNIEV LLGVDDSVVR FHGKEHVQNY LLTLMNIVNE IYHDESLGVH ENSBTAP00000053777/1-1207 AGENDYNIEV LLGVDDSVVR FHGKEHVQNY LLTLMNIVNE IYHDESLGVH BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000286657/1-1205 INVVLVRMIM LGYAKSISLI ERGNPSRSLE NVCRWASQQQ RSDLNHSEHH ENSTTRP00000012462/1-1181 INVVLVRMIM LGYAKSISLI ERGNPSRSLE NVCRWACQQQ KSDPNHSEHH ENSBTAP00000053777/1-1207 INVVLVRMIM LGYAKSISLI ERGNPSRSLE NVCRWACQQQ KSDPNHSEHH BACU015740/1-789 -------MIM LGYAKVKCL- ---------- TICQ------ ---------- bmy_20724T0/1-829 -------MIM LGYAKSISLI ERGNPSRSLE NVCRWACQQQ KSDPXHSEHH 351 400 ENSP00000286657/1-1205 DHAIFLTRQD FGPAGMQGYA PVTGMCHPVR SCTLNHEDGF SSAFVVAHET ENSTTRP00000012462/1-1181 DHAIFLTRQD FGPAGMQGYA PVTGMCHPVR SCTLNHEDGF SSAFVVAHET ENSBTAP00000053777/1-1207 DHAIFLTRQD FGPAGMQGYA PVTGMCHPVR SCTLNHEDGF SSAFVVAHET BACU015740/1-789 ---------- ---------- ---------- ---------- ---------- bmy_20724T0/1-829 DHAIFLTRQD FGPAGMQGYA PVTGMCHPVR SCTLNHEDGF SSAFVVAHET 401 450 ENSP00000286657/1-1205 GHVLGMEHDG QGNRCGDETA MGSVMAPLVQ AAFHRYHWSR CSGQELKRYI ENSTTRP00000012462/1-1181 GHVLGMEHDG QGNRCGDETA MGSVMAPLVQ AAFHRYHWSR CSGQELKRYI ENSBTAP00000053777/1-1207 GHVLGMEHDG QGNRCGDETA MGSVMAPLVQ AAFHRYHWSR CSGQELKRYI BACU015740/1-789 --LLGMEHDG QGNRCGDETA MGSVMAPLVQ AAFHRYHWSR CSGQELKRYI bmy_20724T0/1-829 GHVLGMEHDG QGNRCGDETA MGSVMAPLVQ AAFHRYHWSR CSGQELKRYI 451 500 ENSP00000286657/1-1205 HSYDCLLDDP FDHDWPKLPE LPGINYSMDE QCRFDFGVGY KMCTAFRTFD ENSTTRP00000012462/1-1181 HSYDCLLDDP FEHDWPKLPE LPGINYSMDE QCRFDFGVGY KMCTAXXXXX ENSBTAP00000053777/1-1207 HSYDCLLDDP FEHDWPKLPE LPGINYSMDE QCRFDFGVGY KMCTAFRTFD BACU015740/1-789 HSYDCLLDDP FEHDWPKLPE LPGINYSMDE QCRFDFGVGY KMCTAFRTFD bmy_20724T0/1-829 HSYDCLLDDP FEHDWPKLPE LPGINYSMDE QCRFDFGVGY KMCTAFRTFD 501 550 ENSP00000286657/1-1205 PCKQLWCSHP DNPYFCKTKK GPPLDGTECA AGKWCYKGHC MWKNANQQKQ ENSTTRP00000012462/1-1181 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXWCYKGHC MWKNANQQKQ ENSBTAP00000053777/1-1207 PCKQLWCSHP DNPYFCKTKK GPPLDGTECA AGKWCYKGHC MWKNANQQKQ BACU015740/1-789 PCKQLWCSHP DNPYFCKTKK GPPLDGTECA AGKWCYKGHC MWKNANQQKQ bmy_20724T0/1-829 PCKQLWCSHP DNPYFCKTKK GPPLDGTECA AGKWCYKGHC MWKNANQQKQ 551 600 ENSP00000286657/1-1205 DGNWGSWTKF GSCSRTCGTG VRFRTRQCNN PMPINGGQDC PGVNFEYQLC ENSTTRP00000012462/1-1181 DGNWGSWTKF GSCSRTCGTG VRFRTRQCNN PMPINGGQDC PGVNFEYQLC ENSBTAP00000053777/1-1207 DGNWGSWTKF GSCSRTCGTG VRFRTRQCNN PTPINGGQDC PGVNFEYQLC BACU015740/1-789 DGNWGSWTKF GSCSRTCGTG VRFRTRQCNN PMPINGGQDC PGVNFEYQLC bmy_20724T0/1-829 DGNWGSWTKF GSCSRTCGTG VRFRTRQCNN PMPINGGQDC PGVNFEYQLC 601 650 ENSP00000286657/1-1205 NTEECQKHFE DFRAQQCQQR NSHFEYQNTK HHWLPYEHPD PKKRCHLYCQ ENSTTRP00000012462/1-1181 NTEECQKHFE DFRAQQCQQR NSDLEYQNTK HHWLPYEHPD SKKRCHLYCQ ENSBTAP00000053777/1-1207 NTEECQKHFE DFRAQQCQQR NSHFEYQNTK HHWLPYEHPD SKKRCHLYCQ BACU015740/1-789 NTEECQKHFE DFRAQQCQQR NSHFEYQNTK HHWLPYEHPD SKKRCHLYCQ bmy_20724T0/1-829 NTEECQKHFE DFRAQQCQQR NSHFEYQNTK HHWLPYEHPD SKKRCHLYCQ 651 700 ENSP00000286657/1-1205 SKETGDVAYM KQLVHDGTHC SYKDPYSICV RGECVKVGCD KEIGSNKVED ENSTTRP00000012462/1-1181 SKETGDVAYM KQLVHDGTRC SYKDPYSICV RGECVKVGCD KEIGSNKVED ENSBTAP00000053777/1-1207 SKETGDVAYM KQLVHDGTRC SYKDPYSICV RGECVKVGCD KEIGSNKVED BACU015740/1-789 SKEAGDVAYM KQLVHDGTRC SYKDPYSMCV RGECVKVGCD KEIGSNKVED bmy_20724T0/1-829 SKEAGDVAYM KQLVHDGTRC SYKDPYSICV RGECVKVGCD KEIGSNKVED 701 750 ENSP00000286657/1-1205 KCGVCGGDNS HCRTVKGTFT RTPRKLGYLK MFDIPPGARH VLIQEDEASP ENSTTRP00000012462/1-1181 KCGVCGGDNS HCRTVKGTFT RTPRKLGYLK MFDIPPGARH VLIQEDEASP ENSBTAP00000053777/1-1207 KCGVCGGDNS HCRTVKGTFT RTPRKLGYLK MFDIPPGARH VLIQEDEASP BACU015740/1-789 KCGVCGGDNS HCRTVKGTFT RTPRK----- ---------- ---------- bmy_20724T0/1-829 KCGVCGGDNS HCRTVKGTFT RTPRK----- ---------- ---------- 751 800 ENSP00000286657/1-1205 HILAIKNQAT GHYILNGKGE EAKSRTFIDL GVEWDYNIED DIESLHTDGP ENSTTRP00000012462/1-1181 HILAIKNQGT GHYILNGKGE EAKSKTFIDL GVEWDYNIED DIETLHTDGP ENSBTAP00000053777/1-1207 HVLAIKNQAT GHYILNGKGE EAKSKTFIDL GVEWDYNIED DIETLHTDGP BACU015740/1-789 --LAIKNQAT GHYILNGKGE EAKSKTFIDL GVEWDYNIED DIETLHTDGP bmy_20724T0/1-829 --LAIKNQAT GHYILNGKGE EAKSKTFIDL GVEWDYNIED DIETLHTDGP 801 850 ENSP00000286657/1-1205 LHDPVIVLII PQENDTRSSL TYKYIIHEDS VPTINSNNVI QEELDTFEWA ENSTTRP00000012462/1-1181 LHDPVIVLII PQENDTRSSL TYKYIIHEDS APTINNNNVI QEELDTFEWA ENSBTAP00000053777/1-1207 LHDPVIVLII PQENDTRSSL TYKYIIHEDS APTINSNNVI QEELDTFEWA BACU015740/1-789 LHDPVIVLII PQENDTRSSL TYKYIIHEDS APTINNNNVI QEELDTFEWA bmy_20724T0/1-829 LHDPVIVLII PQENDTRSSL TYKYIIHEDS APTINNNNVI QEELDTFEWA 851 900 ENSP00000286657/1-1205 LKSWSQCSKP CGGGFQYTKY GCRRKSDNKM VHRSFCEANK KPKPIRRMCN ENSTTRP00000012462/1-1181 LKSWSQCSKP CGGGFQYTKY GCRRKSDNKM VHRSFCEANK KPKPIRRMCN ENSBTAP00000053777/1-1207 LKSWSQCSKP CGGGFQYTKY GCRRKSDNKM VHRSFCEVNK KPKPIRRMCN BACU015740/1-789 LKSWSQCSKP CGGGFQYTKY GCRRKSDNKM VHRSFCEANK KPKPIRRMCN bmy_20724T0/1-829 LKSWSQCSKP CGGGFQYTKY GCRRKSDNKM VHRSFCEANK KPKPIRRMCN 901 950 ENSP00000286657/1-1205 IQECTHPLWV AEEWEHCTKT CGSSGYQLRT VRCLQPLLDG TNRSVHSKYC ENSTTRP00000012462/1-1181 IQECTHPLWA AEEWEHCTKT CGSSGYQLRA VRCLQPSHDG TNRSVHSKYC ENSBTAP00000053777/1-1207 IQECTHPLWA AEEWEHCTKT CGTSGYQLRT VRCLQPLHDG TNRSVHSKYC BACU015740/1-789 IQECTHPLWA AEEWEHCTKT CGSSGYQLRA VRCLQPSHDG TNRSVHSKYC bmy_20724T0/1-829 IQECTHPL-- ---------- ---SGYQLRA VRCLQPSHDG TNRSVHSKYC 951 1000 ENSP00000286657/1-1205 MGDRPESRRP CNRVPCPAQW KTGPWSECSV TCGEGTEVRQ VLCRAGDHCD ENSTTRP00000012462/1-1181 VGGRPESRRP CNRVPCPAQW KTGPWNECSV TCGEGTEVRQ VLCRAGDHCD ENSBTAP00000053777/1-1207 AGDRPESRRP CNRVPCPAQW KTGPWNECSV TCGEGTEVRQ VLCRAGDHCD BACU015740/1-789 VGGRPESRRP CNRVPCPAQW KTGPWNECSV TCGEGTEVRQ VLCRAGDHCD bmy_20724T0/1-829 VGGRPESRRP CNRVPCPAQW KTGPWNECSV TCGEGTEVRQ VLCRAGDHCD 1001 1050 ENSP00000286657/1-1205 GEKPESVRAC QLPPCNDEPC LGDKSIFCQM EVLARYCSIP GYNKLCCESC ENSTTRP00000012462/1-1181 GEKPESVRAC QLPPCNDEPC LGDKSIFCQM EVLARYCSIP GYNKLCCESC ENSBTAP00000053777/1-1207 GEKPESVRAC QLPPCNDEPC LGDKSIFCQM EVLARYCSIP GYNKLCCESC BACU015740/1-789 GEKPESVRAC QLPPCNDEPC LGDKSIFCQM EVLARYCSIP GYNKLCCESC bmy_20724T0/1-829 GEKPESVRAC QLPPCN---- ---------- ---------- GYNKLCCESC 1051 1100 ENSP00000286657/1-1205 SKRSSTLPPP YLLEAAETHD DVIS-----N PSDLPRSLVM PTSLVPYHSE ENSTTRP00000012462/1-1181 SKRSSTLPPP YLPEAAETHD DAIF-----N SSDLPESLMM PTSLVPYYLE ENSBTAP00000053777/1-1207 SKRSSTLPPP YLSEAAETHD DAIFSDLPGD PSDLPGSLVM PTSLVPYYSE BACU015740/1-789 SKRSSTLPPP YLPEAAETHD DAIF-----N SSDLPESLMM PTSLVPYYSE bmy_20724T0/1-829 SKRSSTLPPP YLPEAAETHD DAIF-----N SSDLPESLMM PTSLVPYYSE 1101 1150 ENSP00000286657/1-1205 TPA-KKMSLS SISSVGGPNA YAAFRPNSKP DGANLRQRSA QQAGSKTVRL ENSTTRP00000012462/1-1181 TPAEKKKSLS RISSVGGPNA HAAFRPDSKS SGANLPQRRA QPAENKTLR- ENSBTAP00000053777/1-1207 TPAEKKKSLS RISSIAGPNE PAAFRSNSKS NGANLSQRQA QPAENATLG- BACU015740/1-789 TPAEKKKSLS KISSVGGPNA HAAFRPNSKS SGANLPQRRA QPAENKTLR- bmy_20724T0/1-829 TPAEKKKSLS RISSVGGPNA HAAFRPNSKS SGANLPQRRA QPAENKTLR- 1151 1200 ENSP00000286657/1-1205 VTVPSSPPTK RVHLSSASQM AAASFFAASD SIGASSQART SKKDGKIIDN ENSTTRP00000012462/1-1181 ---LSSPPTK SGHLSSSPQM AAAPFLAASD SIGASSQART SKKDEKIIDK ENSBTAP00000053777/1-1207 ---PASPPTK SGHLSSSPQL AAARFLAASG SIGASSQART SKKDEKLIDK BACU015740/1-789 ---LASPPTE SGHLRSSPQM AAAPFLAASD SIGASSQART SKKDEKIIDK bmy_20724T0/1-829 ---LASPPTK SGHLSSSPQM AAAPCLAASD SIGASSQART SKKDEKIIDK 1201 1250 ENSP00000286657/1-1205 RRPTRSSTLE R ENSTTRP00000012462/1-1181 RRPLRSSTLE R ENSBTAP00000053777/1-1207 RRPLRSSTLE R BACU015740/1-789 RRPLRSSTLE R bmy_20724T0/1-829 RRPLRSSTLE R