KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:22:10 2014 Check: 00 .. Name: ENSBTAP00000053778/1-784 Len: 1038 Check: 4288 Weight: 1.00 Name: bmy_09149T0/1-849 Len: 1038 Check: 941 Weight: 1.00 Name: ENSTTRP00000002377/1-1010 Len: 1038 Check: 9870 Weight: 1.00 Name: BACU018634/1-992 Len: 1038 Check: 847 Weight: 1.00 // 1 50 ENSBTAP00000053778/1-784 ---------- ---------- ---------- ---------- ---------- bmy_09149T0/1-849 ---------- ---------- ---------- --MRLVGLLP L--------- ENSTTRP00000002377/1-1010 MADAALDAVR RELREFPAAA RELSVPPAVP YLDKPPGPLH FYRDWVCP-R BACU018634/1-992 ---------- ---------- -ELSVPLAVP YLDKPPGPLH FCRDWVCPNR 51 100 ENSBTAP00000053778/1-784 ---------- ---------- ---------- ---------- ---------- bmy_09149T0/1-849 ---------- ------WGPL PAFQTSAAPS ATPPSQTPAA SCSAADGE-- ENSTTRP00000002377/1-1010 SCIIRNALQH -PALQKW-SL PYIRATAGSA EVSVAVTPDG YADAVRGDRF BACU018634/1-992 PCIIRNALQH WPALQKW-SL PYLRATAGSA EVSVAVTPDG YADAVRGDRF 101 150 ENSBTAP00000053778/1-784 ---------- ---------- ---------- ---------- ---------- bmy_09149T0/1-849 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002377/1-1010 VMPAERRLPL SCVLDVLEGR AQHPGVLYVQ KQCSNLLTEL PQLLPDLEPH BACU018634/1-992 VMPAERRLPL SCVLDVLEGR AQHPGVLYVQ KQCSNLLTEL PQLLPDLEPH 151 200 ENSBTAP00000053778/1-784 ---------- ---------- ---------- ---------- ---------- bmy_09149T0/1-849 LSWG------ ---------- ---------- ---------- ---------- ENSTTRP00000002377/1-1010 VPWASEALGK MPDAVNFWLG EAAAVTSLHK DHYENLYCVV SGEKHFLLHP BACU018634/1-992 VPWASEALGK MPDAVNFWLG EAAAVTSLHK DHYENLYCVV SGEKHFLLHP 201 250 ENSBTAP00000053778/1-784 ---------- ---------- ---------- --MALAKVPG TCLLTIRVLQ bmy_09149T0/1-849 ----PLL--- ---------- ---------- ----EAKVPG TCLLTVHVLQ ENSTTRP00000002377/1-1010 PSDRPFIPYE LYTPATYQLT EEGSFKMVDE EAMEKAKVPG TCLLTIHVLQ BACU018634/1-992 PSDRPFIPYE LYTPATYQLT EEGSFKMVDE EAMEKAKVPG TCLLTIHVLQ 251 300 ENSBTAP00000053778/1-784 AHGLPSKDLV TSSDCYVTLW LPTASSHQLQ TRTVKNCRNP VWNQSFHFRI bmy_09149T0/1-849 AHDLPSKDLV TPSDCYMTLW LPSASSQQLQ TRMVKNSRNP IWNQSFHFRI ENSTTRP00000002377/1-1010 ARDLPSKDLL TPSDCYVTLW LPSASSHQLQ TRVVKNSRNP IWNQSFHFRI BACU018634/1-992 AHGLPSKDLV TPSDCYVTLW LPSASSQQLQ TRTVKNSRNP VWNQSFHFRI 301 350 ENSBTAP00000053778/1-784 HSQIKNIVYL RVFDQDLLTT DDPLLSVLFD VGTLRAGESR RESFSLSPQG bmy_09149T0/1-849 HSQLKNIVQL KVFDQDLLTK DDPLLSVLFD VGTLRAGESR RESFSLNPQA ENSTTRP00000002377/1-1010 HTQLKNIVQF KVFDQDLLTK DDPLLLVLFD VGTLRAGESR RESFSLNPQG BACU018634/1-992 HSQLKNIVQL KVFDQDLLTK DDPLLSVLFD VGTLRAGESR RESFSLNPQA 351 400 ENSBTAP00000053778/1-784 E--------- ---------- ---ERLEVEF RLQNLTDGAE RLFSNGILVA bmy_09149T0/1-849 RLCAGSGGLQ PWGGDALEGS QGKGQLEVEF RLQNLTDCAE RLVSNGILVA ENSTTRP00000002377/1-1010 K--------- ---------- ---EQLEVEF RLQNLTDCAE RLVSNGILVA BACU018634/1-992 RL-------- ---------- ---EQLEVEF RLQNLTDCAE RLVSNGILVA 401 450 ENSBTAP00000053778/1-784 RELSCLHVRL EKAGDLQESE GRVQLVVPGS CEGPQEAFVG AGSFRFHWPA bmy_09149T0/1-849 RELSCLHVRL EKAGGQQGSE GGVQLVVPGS CEGPQEASVG AGSFRFHWPA ENSTTRP00000002377/1-1010 RELSCLCVRL EKAGGQQGSE GRVQLVVPGS CEGPQEASVG AGSFRFHWPA BACU018634/1-992 RELSCLHVQL EKARGQQGSE GRVQLVVPGS YEGPQEASVG AGSFRFHWPA 451 500 ENSBTAP00000053778/1-784 CWEQELSIHL QDAPQEQLKV PLRALPSGQV VQLVFPTSQE PLMKVELKNE bmy_09149T0/1-849 CWEQELSIHL QDAPQEQLKV PLRVLPSDQV VRLVFPTSQE PLMKVELKKE ENSTTRP00000002377/1-1010 CWEQELSVHL QDEPQEQLKV PLRALPSDQV VRRVFPTSQE PLMKVELKKE BACU018634/1-992 CWEQELSIHL QDAPQEQLKV PLRALPSDQV VRLVFPTSQE PLMKVELKKE 501 550 ENSBTAP00000053778/1-784 EGPRDLAVRL GCGPCAEEQA FLSRRKQVVA KALQQALHLD RDLREDEIPV bmy_09149T0/1-849 EGPRELAVRL DCGPCAEERA FLSRRKQVVA KALKQALQLD GDLQEDEIPV ENSTTRP00000002377/1-1010 EGPRELAVRL DCGPCAEERA FLSRRKQVVA KALKQALQLD GDLQEDEIPV BACU018634/1-992 EGPRELAVRL DCGPCAEERA FLSRRKQVVA KALKQALQLD GDLQEDEIPV 551 600 ENSBTAP00000053778/1-784 VAVMATGGGI RAMTSLYGQL AGLKALGLLD CVSYITGASG STWALANLYE bmy_09149T0/1-849 VAVMATGGGI RAMTSLYGQL AGLKELGLLD CISCITGASG STWALANLYE ENSTTRP00000002377/1-1010 VAVAATGGGT RAMTSLYGQL AGLKELGLLD CISYITGASG STWALANLYE BACU018634/1-992 VAVMATGGGI RAMTSLYGQL AGLKELGLLD CISCITGASG STWALANLYE 601 650 ENSBTAP00000053778/1-784 DPEWSQKDLA GPIESLKTQV AKSKLGVLAP RQLLRYQQEL AERARLGHPA bmy_09149T0/1-849 DPEWSQKDLA GPIESLKTQV TKSKLGVLAP SQLWRYQQEL AERARLGHPP ENSTTRP00000002377/1-1010 DPEWSQKDLA GPIESLKTQV TKSKLGVVAP SQLWRYQQEL AERAHLGHPP BACU018634/1-992 DPEWSQKDLA GPIESLKMQV TKSKLGVLAP SQLWRYQQEL AERARLGHPP 651 700 ENSBTAP00000053778/1-784 CFTNLWALIN EALLHDEPHD HKLSDQREAL SRGQNPLPIY CALNTKEQNL bmy_09149T0/1-849 CFTNLWALIN EALLHDEPHD HKLSDQREAL SRGQNPLPIY CALNTKERNL ENSTTRP00000002377/1-1010 CFTTLWALIN EALLHDEPHD HKLSDQREAL SRGQNPLPIY CALNTKERNL BACU018634/1-992 CFTNLWALIN EALLHDEPHD HKLSDQREAL SRGQNPLPIY CALNTKERNL 701 750 ENSBTAP00000053778/1-784 TTFEFGEWCE FSPYEVGFPK YGAFIPSELF GSEFFMGRLT KQLPESRICF bmy_09149T0/1-849 TTFEFGEWCE FSPYEVGFPK YGAFIPSELF GSEFFMGRLT KRLPESRICF ENSTTRP00000002377/1-1010 TTFEFGEWCE FSPYEVGFPK YGAFIPSELF GSEFFMGRLI KRLPESRICF BACU018634/1-992 TTFEFGEWCE FSPYEVGFPK YGAFIPSELF GSEFFMGRLT KRLPESRICF 751 800 ENSBTAP00000053778/1-784 LEGIWSNLYA ANLQDSLYWS SEPSQFWDRW AQARASLDKE QVPLLKIEEP bmy_09149T0/1-849 LEGIWSNLYA ASLQDSLYWS SEPSQFWDRW AQAQASLDKE QVPLLNIGEP ENSTTRP00000002377/1-1010 LEGIWSNVYA ASLQDSLYWS SEPSQFWDRW AQAQASLDKE QVPLLNIQEP BACU018634/1-992 LEGIWSNLYA ANLQDSLYWS SEPSQFWDRW AQAQASLDKE QVPLLNIGEP 801 850 ENSBTAP00000053778/1-784 PTVAGRIAEV FTDLLTRRPL AQATHNFLRG FSFHKDYFQH PHFSAWKATK bmy_09149T0/1-849 PTAASRIAEF FTDLLTRRPL AQATHNFLRG LSFHKDYFQH PHFSAWKATK ENSTTRP00000002377/1-1010 PTVASRIAEF FTDLLTRRPL AQATHNFLRG LSFHKDYFQH PHFSAWKATK BACU018634/1-992 PTAASRIAEF FTDLLTRRPL AQATHNFLRG LSFHKDYFQH PHFSAWKATK 851 900 ENSBTAP00000053778/1-784 LDGLPNELTP AEPYLCLLDV GYLVNTSCPP LLPPTRDVDL ILSLDYNLHG bmy_09149T0/1-849 LDGLPNQLTP AEPFLCLLDV GYLVNTSCPP LLRPTRDVDL ILSLDYNLHG ENSTTRP00000002377/1-1010 LDGLPSQLTP AEPFLCLLDV GYLVNTSCPP LLRPTRDVDL ILSLDYNLHG BACU018634/1-992 LDGLPNQLTP AEPFLCLLDV GYLVNTSCPP LLRPTRDVDL ILSLDYNLHG 901 950 ENSBTAP00000053778/1-784 AFQQLQLLGR FCQEQGIPFP PISPSPEEQC QPQECHLFSD PARPDIPAVL bmy_09149T0/1-849 AFQQLQLLDQ FCQEQGIPFP SISPSPEEQR QPRECHLFSD PARPDAPAVL ENSTTRP00000002377/1-1010 AFQQLQILDR FCQEQGIPFP SISPSPEEQC QPRECHLFSD PAHPDAPAVL BACU018634/1-992 AFQQLQLLDR FCQKQGIPFP SISPSPEEQR QPRECHLFSD PARPDAPAVL 951 1000 ENSBTAP00000053778/1-784 HFPLVNASFR DHSAPGVRRT AEEQAAGEVN LSASDSPYHY SKVTYSLEDT bmy_09149T0/1-849 HFPLVNASFR EHSAPGVRRT AEAQEAGEVN LSSSDSPYHY LKVTYSQEDM ENSTTRP00000002377/1-1010 HFPLVNASFR EYSAPGVRRT AEAQEAGEVN LSSSDSPYHY MKVTYSREDM BACU018634/1-992 HFPLVNASFR EHSAPGVRRT AEAQEAGEVN LSSSDSPYHY LKVTYSQEDM 1001 1050 ENSBTAP00000053778/1-784 DKLLHLTQYN ICNNQERLLE ALREAMQRRR QRTQRRPE bmy_09149T0/1-849 DKLLRLTHYN ICNNQEQLLE ALREAVRRRK ---QRRAE ENSTTRP00000002377/1-1010 DKLLRLTHYN ICNNQEQLLE ALREAVRRRR ---QRRAE BACU018634/1-992 DKLLRLTHYN ICNNQEQLLE ALREAVRRRK ---QRRAE