KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:11 2014 Check: 00 .. Name: ENSP00000362978/1-573 Len: 634 Check: 9793 Weight: 1.00 Name: ENSBTAP00000053779/1-573 Len: 634 Check: 8899 Weight: 1.00 Name: bmy_18067T0/1-591 Len: 634 Check: 629 Weight: 1.00 Name: BACU003256/1-474 Len: 634 Check: 7160 Weight: 1.00 Name: ENSTTRP00000007106/1-573 Len: 634 Check: 9072 Weight: 1.00 // 1 50 ENSP00000362978/1-573 ---------- ---------- ---------- ---------- ---MEEEQDL ENSBTAP00000053779/1-573 ---------- ---------- ---------- ---------- ---MEEEQDL bmy_18067T0/1-591 MSYTSGQGGK LCQSWTVLRL IVSLTRVFSP FPILECDSKI NLKTRTGRAG BACU003256/1-474 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007106/1-573 ---------- ---------- ---------- ---------- ---MEEEQDL 51 100 ENSP00000362978/1-573 PEQPVKKAKM QESGE----- ---------- ---QTISQVS NPDVSDQKPE ENSBTAP00000053779/1-573 PEQPVKKAKM QESGE----- ---------- ---QTLSQVS NPEVSDQKPE bmy_18067T0/1-591 SEKTVKTAER RLQSSHISVI KKYWSSWKKS KIYQSNHQVS NSEVNDQKPE BACU003256/1-474 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007106/1-573 PEQPVKKAKM QESGE----- ---------- ---QTLSQVS NSEVNDQKPE 101 150 ENSP00000362978/1-573 TSSLASNLPM SEEIMTCTDY IPRSSNDYTS QMYSAKPYAH ILSVPVSETA ENSBTAP00000053779/1-573 TSSLASNLTM SEEIMTCTDY IPRSSNDYTS QMYSAKPYAH ILSVPVSETA bmy_18067T0/1-591 TSSLASNLTM SEEIMTCTDY IPRSSNDYTS QMYSAKPYAH ILSVPVSETA BACU003256/1-474 ---------- ----MTCTDY IPRSSNDYTS QMYSAKPYAH ILSVPVSETA ENSTTRP00000007106/1-573 TSSLASNLTM SEEIMTCTDY IPRSSNDYTS QMYSAKPYAH ILSVPVSETA 151 200 ENSP00000362978/1-573 YPGQTQYQTL QQTQPYAVYP QATQTYGLPP FGALWPGMKP ESGLIQTPSP ENSBTAP00000053779/1-573 YPGQTQYQTL QQSQPYAVYP QATQTYGLPP FGALWPGMKP ESGLIQTPSP bmy_18067T0/1-591 YPGQTQYQPL QQSQPYAVYP QATQTYGLPP FGALWPGMKP ESGLTQTPSP BACU003256/1-474 YPGQTQYQPL QQSQPYAVYP QATQTYGLPP F--------- ---------- ENSTTRP00000007106/1-573 YPGQTQYQPL QQSQPYAVYP QATQTYGLPP FGALWPGMKP ESGLTQTPSP 201 250 ENSP00000362978/1-573 SQHSVLTCTT GLTTSQPSPA HYSYPIQASS TNASLISTSS TIANIPAAAV ENSBTAP00000053779/1-573 SQHSVLTCTT GLTTSQPSPA HYSYPIQASS TNASLIPTSS AIANIPTAAV bmy_18067T0/1-591 SQHSVLTCTT GLTTSQPSPA HYSYPIQASS TNASLISTSS TIANIPAAAV BACU003256/1-474 ---------- ---------- -------ASS TNASLISTSS TIANIPAAAV ENSTTRP00000007106/1-573 SQHSVLTCTT GLTTSQPSPA HYSYPIQASS TNASLISTSS TIANIPAAAV 251 300 ENSP00000362978/1-573 ASISNQDYPT YTILGQNQYQ ACYPSSSFGV TGQTNSDAES TTLAATTYQS ENSBTAP00000053779/1-573 SSISNQDYPT YTILGQSQYQ ACYPSSSFGV TGQTNSDAEN TTLAAATYQT bmy_18067T0/1-591 SSISNQDYPT YTILGQSQYQ ACYPSSSFGV TGQTNSDAES TTLAAATYQT BACU003256/1-474 SSISNQDYPT YTILGQSQYQ ACYPSSSFGV TGQTNSDAES TTLAAATYQT ENSTTRP00000007106/1-573 SSISNQDYPT YTILGQSQYQ ACYPSSSFGV TGQTNSDAES TTLAAATYQT 301 350 ENSP00000362978/1-573 EKPSVMAPAP AAQRLSSGDP STSPSLSQTT PSKDTDDQSR KNMTSKNRGK ENSBTAP00000053779/1-573 EKPSVMVPAA AAPRLSSGDP SPSPSLTQTT PSKDADDQSR KNMTGKNRGK bmy_18067T0/1-591 EKPSVMVPAP AAQRLSSGDP STSPSLTQTT PSKDADDQSR KNMTGKNRGK BACU003256/1-474 EKPSVMVPAP AAQRLSSGDP STSPSLTQTT PSKDADDQSR KNMTGKNRGK ENSTTRP00000007106/1-573 EKPSVMVPAP AAQRLSSGDP STSPSLTQTT PSKDADDQSR KNMTGKNRGK 351 400 ENSP00000362978/1-573 RKADATSSQD SELERVFLWD LDETIIIFHS LLTGSYAQKY GKDPTVVIGS ENSBTAP00000053779/1-573 RKADASSSQD SELERVFLWD LDETIIIFHS LLTGSYAQKY GKDPTVVIGS bmy_18067T0/1-591 RKADASSSQD SELE------ ---------- ---------- --DPTVVIGS BACU003256/1-474 RKADASSSQD SELERVFLWD LDETIIIFHS LLTGSYAQKY GKDPTVVIGS ENSTTRP00000007106/1-573 RKADASSSQD SELERVFLWD LDETIIIFHS LLTGSYAQKY GKDPTVVIGS 401 450 ENSP00000362978/1-573 GLTMEEMIFE VADTHLFFND LEECDQVHVE DVASDDNGQD LSNYSFSTDG ENSBTAP00000053779/1-573 GLTMEEMIFE VADTHLFFND LEECDQVHVE DVASDDNGQD LSNYSFSTDG bmy_18067T0/1-591 GLTMEEMIFE VADTHLFFND LEALKEVE-- --------QQ GGNYSFSTDG BACU003256/1-474 GLTMEEMIFE VADTHLFFND LEECDQVHVE DVASDDNGQD LSNYSFSTDG ENSTTRP00000007106/1-573 GLTMEEMIFE VADTHLFFND LEECDQVHVE DVASDDNGQD LSNYSFSTDG 451 500 ENSP00000362978/1-573 FSGSGGSGSH GSSVGVQGGV DWMRKLAFRY RKVREIYDKH KSNVGGLLSP ENSBTAP00000053779/1-573 FSGSGGSGSH GSSVGVQGGV DWMRKLAFRY RKVREIYDKH KSNVGGLLSP bmy_18067T0/1-591 FSGSGGSGSH GSSVGVQGGV DWMRKLAFRY RKVREIYDKH KSNVAGLLSP BACU003256/1-474 FSGSGGSGSH GSSVGVQGGV DWMRKLAFRY RKVREIYDKH KSNVAGLLSP ENSTTRP00000007106/1-573 FSGSGGSGSH GSSVGVQGGV DWMRKLAFRY RKVREIYDKH KSNVAGLLSP 501 550 ENSP00000362978/1-573 QRKEALQRLR AEIEVLTDSW LGTALKSLLL IQSRKNCVNV LITTTQLVPA ENSBTAP00000053779/1-573 QRKEALQRLR AEIEVLTDSW LGTALKSLLL IQSRKNCVNV LITTTQLVPA bmy_18067T0/1-591 QRKEALQRLR AEIEVLTDSW LGTALKSLLL IQSRKNCVNV LITTTQLVPA BACU003256/1-474 QRKEALQRLR AEIEVLTDSW LGTALKSLLL IQSRKNCVNV LITTTQLVPA ENSTTRP00000007106/1-573 QRKEALQRLR AEIEVLTDSW LGTALKSLLL IQSRKNCVNV LITTTQLVPA 551 600 ENSP00000362978/1-573 LAKVLLYGLG EIFPIENIYS ATKIGKESCF ERIVSRFGKK VTYVVIGDGR ENSBTAP00000053779/1-573 LAKVLLYGLG EIFPIENIYS ATKIGKESCF ERIVSRFGKK VTYVVIGDGR bmy_18067T0/1-591 LAKVLLYGLG EIFPIENIYS -----KESCF ERIVSRFGKK VTYVVIGDGR BACU003256/1-474 LAKVLLYGLG EIFPIENIYS ATKIGKESCF ERIVSRFGKK VTYVVIGDGR ENSTTRP00000007106/1-573 LAKVLLYGLG EIFPIENIYS ATKIGKESCF ERIVSRFGKK VTYVVIGDGR 601 650 ENSP00000362978/1-573 DEEIAAKQHN MPFWRITNHG DLVSLHQALE LDFL ENSBTAP00000053779/1-573 DEEIAAKQHN MPFWRITNHG DLVSLHQALE LDFL bmy_18067T0/1-591 DEEIAAKQHN MPFWRITNHG DLVSLHQALE LDFL BACU003256/1-474 DEEIAAKQHN MPFWRITNHG DLVSLHQALE LDFL ENSTTRP00000007106/1-573 DEEIAAKQHN MPFWRITNHG DLVSLHQALE LDFL