KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:22:13 2014 Check: 00 .. Name: ENSP00000308117/1-757 Len: 776 Check: 755 Weight: 1.00 Name: ENSBTAP00000053786/1-761 Len: 776 Check: 9582 Weight: 1.00 Name: bmy_07795T0/1-769 Len: 776 Check: 9856 Weight: 1.00 Name: ENSTTRP00000013669/1-748 Len: 776 Check: 9511 Weight: 1.00 // 1 50 ENSP00000308117/1-757 MLLRLLLAWA AAGPTLGQDP WAAEPRAACG PSSCYALFPR RRTFLEAWRA ENSBTAP00000053786/1-761 MLLRLLLAWA AAVPTLGQAP WATEPRAACA PGSCYALFPR RRTFLEAWRA bmy_07795T0/1-769 MLLRLLLAWA AAVPTLGQAP WAAEPRAACG PGSCYALFPR RRTFLEAWRA ENSTTRP00000013669/1-748 MLLRLLLAWA VVVSMLDQAP WAAEPHAACG PGSCYALFPR RRTFLEAWRA 51 100 ENSP00000308117/1-757 CRELGGDLAT PRTPEEAQRV DSLVGAGPAS RLLWIGLQRQ ARQCQLQRPL ENSBTAP00000053786/1-761 CRELGGDLAT PRTLEEAQRV DSLVGSGPAS RLLWIGLQRQ ARQCQPQRPL bmy_07795T0/1-769 CRELGGDLAT PRTPEEARRV DSLVGSGPAS RLLWIGLQRQ ARHCQPQRPL ENSTTRP00000013669/1-748 CRELGGDLAT PRTPEEARRV DSLVGPGPAS RLLWIGLQRQ ARHCQPQRPL 101 150 ENSP00000308117/1-757 RGFTWTTGDQ DTAFTNWAQP ASGGPCPAQR CVALEASGEH RWLEGSCTLA ENSBTAP00000053786/1-761 RGFTWTTGDQ DTAFTNWAQP ATGGPCPAQR CAALEASGEH RWLEGSCTLA bmy_07795T0/1-769 RGFTWTTGDQ DTAFTNWAQP ATGGPCPAQR CAALEASGEH RWLEGSCTLA ENSTTRP00000013669/1-748 RGFTWTTGDQ DTAFTNWAQP ATGGPCPAQR CAALEASGEH RWLEGSCTLA 151 200 ENSP00000308117/1-757 VDGYLCQFGF EGACPALQDE AGQAGPAVYT TPFHLVSTEF EWLPFGSVAA ENSBTAP00000053786/1-761 VDGYLCQFGF EGSCPALPEE VGQAGPAVYT TPFHLVSEEF EWLPFGSVAA bmy_07795T0/1-769 VDGYLCQFGF EGSCPALPDE AGQAGPAVYT TPFHLVSAEF QWLPFGSVAA ENSTTRP00000013669/1-748 VDGYLCQFGF EGSCPALPDE AGQAGPAVYT TPFHLVSAEF QWLPFGSVAA 201 250 ENSP00000308117/1-757 VQCQAGRGAS LLCVKQPEGG VGWSRAGPLC LGTGCSPDNG GCEHECVEEV ENSBTAP00000053786/1-761 VPCQAGRKAS LLCVKQPEGG VGWSRTGPLC PGIGCGPDNG GCEHECIEAA bmy_07795T0/1-769 VPCQAGREAS LLCVKQPDGG VGWSRTGPLC PGTGCGPDNG GCEHECVEEA ENSTTRP00000013669/1-748 VPCQAGREAS LLCVKQPDGG VGWSRTGPLC PGTGCGPDNG GCEHECVEEA 251 300 ENSP00000308117/1-757 DGHVSCRCTE GFRLAADGRS CEDPCAQAPC EQQCEPGGPQ GYSCHCRLGF ENSBTAP00000053786/1-761 DGRVSCRCSE GFRLAADGRS CEDPCAHAPC EQQCEPGGPQ GYSCHCRLGF bmy_07795T0/1-769 DGRVSCRCTE GFRLAVDGRS CEDPCAHALC EQQCEPGGPQ GYSCHCRLGF ENSTTRP00000013669/1-748 DGRVSCRCTE GFRLAVDGRS CEDPCAHALC EQQCEPGGPQ GYSCHCRLGF 301 350 ENSP00000308117/1-757 RPAEDDPHRC VDTDECQIAG VCQQMCVNYV GGFECYCSEG HELEADGISC ENSBTAP00000053786/1-761 RPAEDEPHRC VDTDECQIAG VCQQMCVNYV GGFECYCSEG HELEADGISC bmy_07795T0/1-769 RPAEDEPHRC VDTDECQIAG VCQQMCVNYV GGFECYCSEG HELEADGISC ENSTTRP00000013669/1-748 RPAEDEPHRC VDTDECQIAG VCQQMCVNYV GGFECYCSEG HELEADGISC 351 400 ENSP00000308117/1-757 SPAGAMGAQA SQDLGDELLD DG---EDEED EDEAWKAFNG GWTEMPGILW ENSBTAP00000053786/1-761 SPAGAMGAQA SQDLEDGLLD EGEEEEEEED EEEAWEAFDG GWTEMPGIPW bmy_07795T0/1-769 SPAGAMGARA SQDLGDELLD DG---EDEED EDEAWEVFDG GWTEMPGIPW ENSTTRP00000013669/1-748 SPAGAMGARA SQDLGDELLD DG---EDEED EDEAWEVFDG GWTEMPGIPW 401 450 ENSP00000308117/1-757 MEPTQPPDFA LAYRPSFPED REPQIPYPEP TWPPPLSAPR VPYHSSVLSV ENSBTAP00000053786/1-761 MEATQSSDFD LVYRPSFPED GEPGMPYLYP TWPPPLSAPE VPHHSSVLSV bmy_07795T0/1-769 MEATQSPDFG LAYRPSFPED RESRMPYLDP TWPPPLSAPR VPYHSSVLSV ENSTTRP00000013669/1-748 MEATQSPDFG LAYRPSFPED RESRMPYLDP TWPPPLSAPR VPYHSSVLSV 451 500 ENSP00000308117/1-757 TRPVVVSATH PTLPSAH--- ---------- ---QPPVIPA THPALSRDHQ ENSBTAP00000053786/1-761 TRPVVASATR PPLPSAHQ-- ---------- ---PPPVIPA IHPALPSDHQ bmy_07795T0/1-769 TRPVVVSATR PPLPSAHQPP IVSATRPPLT PAPQPPVVPA IHPALPSDHQ ENSTTRP00000013669/1-748 TRAVVVSATR PPLPSAH--- ---------- ---QPPVIPA VQPALPSDHQ 501 550 ENSP00000308117/1-757 IPVIAANYPD LPSAYQPGIL SVSHSAQPPA HQPPMISTKY PELFPAHQSP ENSBTAP00000053786/1-761 FPMISANYPD LPSAHRPLII SAAQPGPTPA HQPPVASAKY PKLFPAHQSP bmy_07795T0/1-769 FPKISANYPD PPSAHRPPVI SATHPGPTPA HRPPIISAKY PELFPAHQSP ENSTTRP00000013669/1-748 FPKISANSPD LPSAHRPPVI SATHPGPTPA HRPPSISAKY PELFPAHQSP 551 600 ENSP00000308117/1-757 MFPDTRVAGT QTTTHLPGIP PNHAPLVTTL GAQLPPQAPD ALVLRTQATQ ENSBTAP00000053786/1-761 MFPDTQVVDT QNTTPLPRIP ANHTPLVTTS SPPQPPVTRD VPILKAQAGH bmy_07795T0/1-769 MFPDTQVVDT QNTTHLPRIP ANHAPLVTTS SARQTPVTPD ILVLKAQATH ENSTTRP00000013669/1-748 MFPD-----T QNATHLPRIP ANHAPLVTTS SARQTPVTPD IPVLKAQATH 601 650 ENSP00000308117/1-757 LPIIPTAQPS LTTTSRSPVS PAHQISVPAA TQPAALPTLL PSQSPTNQTS ENSBTAP00000053786/1-761 HPVTSPVQPS RTTAFRSPVP PAHQVPVPAA SQAPASHTPL PPRSSTSQTS bmy_07795T0/1-769 HPITSTVQPS LTTTSRPPVS PAHQVPVPAA TQPPAFHTPL PPESPTNQTS ENSTTRP00000013669/1-748 HPITSTVQSS LITTSRPPVS PAHQVPVPAA TQPPAFHTPL PPESPTKQTL 651 700 ENSP00000308117/1-757 PISPTHPHSK APQIPREDGP SPKLALWLPS PAPTAAPTAL GEAGLAEHSQ ENSBTAP00000053786/1-761 LTSAPHPRSK VPQAPREGAL GPSLAPWPSS AVPTSAPPAL GEASPAGRSR bmy_07795T0/1-769 PASPTHPHSK APQVPREGTP DPNLAPW--- -LPSAVPTAL GEASPAGRSR ENSTTRP00000013669/1-748 LASPTHSHSK AQQVPREGTP DPNLAPW--- -LPSAVPTAL GEASPAGRSR 701 750 ENSP00000308117/1-757 RDDRWLLVAL LVPTCVFLVV LLALGIVYCT RCGPHAPNKR ITDCYRWVIH ENSBTAP00000053786/1-761 RDERWLLVAL LVPTCVFLVV LLALGIVYCT RCGPHAPNKR VTDCYRWVTH bmy_07795T0/1-769 RDDRWLLVAL LVPTCVFLVV LLALGIVYCT RCGPHAPNKR VTDCYRWVTH ENSTTRP00000013669/1-748 RDDRWLLVAL LVPTCVFLVV LLALGIVYCT RCGPHTPNKR VTDCYRWVTH 751 800 ENSP00000308117/1-757 AGSKSPTEPM PPRGSLTGVQ TCRTSV ENSBTAP00000053786/1-761 AGSKGPTEPA PHRGSLTGVQ TCRTSV bmy_07795T0/1-769 AGSKGSTEPA PHRGSLTEVQ TCRTSV ENSTTRP00000013669/1-748 AGSKGSTEPV PHRGSLTGVQ TCRTSV