KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:22:23 2014  Check: 00 ..

 Name: ENSP00000430325/1-198     Len:    220  Check:  6411  Weight:  1.00
 Name: ENSBTAP00000053800/1-149  Len:    220  Check:  4553  Weight:  1.00
 Name: bmy_20050T0/1-159         Len:    220  Check:  1876  Weight:  1.00
 Name: ENSTTRP00000000556/1-205  Len:    220  Check:  8370  Weight:  1.00

//


                          1                                                   50
ENSP00000430325/1-198     ---------- -------MWK LGRGRVLLDE PPEEEDGLRG GPPP-----A 
ENSBTAP00000053800/1-149  ---------- ---------- ---------- ---------- ---------- 
bmy_20050T0/1-159         ---------- ---------- ---------- ---------- --------MG 
ENSTTRP00000000556/1-205  GGARRTHGRT DARARPSMWK L-RSRVLLDE PPEEEDGLRA GPPPSVAPAA 


                          51                                                 100
ENSP00000430325/1-198     AAAAAQAQVQ GASFRGWKEV TSLFNKDDEQ HLLERCKSPK SKGTNLRLKE 
ENSBTAP00000053800/1-149  --------VP GATFRGWKEV TSLFNKDDEQ QLLEGRKSPK SRATNLRLKE 
bmy_20050T0/1-159         KVGVRIRQVQ GASFRGWKEV TSLFNKDDEQ HLLERCKSPK SRGANLRLKE 
ENSTTRP00000000556/1-205  AAAAAPAQVQ GASFRGWKEV TSLFNKDDEQ HLLERCKSPK SRG-NLRLKE 


                          101                                                150
ENSP00000430325/1-198     ELKAEKKSGF WDNLVLKQNI QSKKPDEIEG WEPPKLALED ISADPEDTVG 
ENSBTAP00000053800/1-149  ELKTEKKSGF WDNLVLKQNI QSKKPDEIEG WEPPKLALED VAADSGGPVS 
bmy_20050T0/1-159         DLKTEKKSGF WDNLVLKQNT QSKKPDEIEG WEPPKLALED VAADSGDPMS 
ENSTTRP00000000556/1-205  DLKTEKKSGF WDNLVLKQST QSKKPDEIEG WEPPKLILED VAANSGDPMS 


                          151                                                200
ENSP00000430325/1-198     GHPSWSGWED DAKGSTKYTS LASSANSSRW SLRAAGRLIK EVWINFSQLI 
ENSBTAP00000053800/1-149  DRVSRPGWQE DTKGSSKYTS LAGAGSSSRW SLRSAGKLV- -------SIR 
bmy_20050T0/1-159         DRLSGPGWEE DARGSTKYTS LAGAGNSSRW SLRSAGKLV- -------SIR 
ENSTTRP00000000556/1-205  DRLSGPGWEE DARGSTKYTS LAGAGNSSRW SLRSAGKLV- -------SIR 


                          201                                                250
ENSP00000430325/1-198     ISFRKHCLAH YRELRLCIKY 
ENSBTAP00000053800/1-149  RQSRGHLTDD WEELE----- 
bmy_20050T0/1-159         RQSRGHLTDD WEELE----- 
ENSTTRP00000000556/1-205  RQSRGHLTDD WEELE-----