KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:30 2014 Check: 00 .. Name: ENSP00000366326/1-1014 Len: 1121 Check: 6974 Weight: 1.00 Name: ENSBTAP00000053811/1-1015 Len: 1121 Check: 3583 Weight: 1.00 Name: ENSTTRP00000008846/1-1011 Len: 1121 Check: 7104 Weight: 1.00 Name: bmy_04368T0/1-829 Len: 1121 Check: 3887 Weight: 1.00 Name: BACU013777/1-791 Len: 1121 Check: 8157 Weight: 1.00 // 1 50 ENSP00000366326/1-1014 MRVPVFEDIK DETEEEKIGE EENEEDQ-VF YKPVIEDLSM ELARKCTELI ENSBTAP00000053811/1-1015 MRVPVFEDVK DETEEEKTGE EENEEDK-VF FKPVIEDLSM ELARRCTELI ENSTTRP00000008846/1-1011 MRVPVFEDVK DETQEEKTGE EENEEDK-VF FKPVIEDLSM ELARKCTELI bmy_04368T0/1-829 ---------- ---------- ---------- ---------- ---------- BACU013777/1-791 ---------- MKLKKKKQGK KKMKKTRWVF FKPVIEDLSM ELARKCTELI 51 100 ENSP00000366326/1-1014 SDIRYKEEFK KSKDKCTFVT DSPMLNHVKN IGAFISEAKY KGTIKADLSN ENSBTAP00000053811/1-1015 SDIHYKEEYK KSKGKCMFVT DTPMLNHVKH IGAFISEAKY KGTIKADLSN ENSTTRP00000008846/1-1011 SDIHYKEEYK KSKDKCTFVT DTPMLKHVKR IGAFISEAKY KGTI-ADLSN bmy_04368T0/1-829 ---MYNAELD R--------- ---------- ---------- ---------- BACU013777/1-791 SDIHYKEEYK KSKDKCTFVT DTPMLKHVKH IGAFISEAKY KGTIKADLSN 101 150 ENSP00000366326/1-1014 SLYKRMPATI DSVFAGEVTQ LQSEVAYKQK HDAAKGFSDY AHMKEPPEVK ENSBTAP00000053811/1-1015 SLYKQMPATI DSVFAREVTQ LQSEIAYRQK HDAAKGVSDY AHMKEPPEIK ENSTTRP00000008846/1-1011 SLYKQMPATI DSVFA-EVTQ LQSEVAYKQK HDAAKGFSDY AHMKEPPEIK bmy_04368T0/1-829 ---------- ---------- ---------- ---------- ------PDIK BACU013777/1-791 SLYKQMPATI DSVFAREVTQ LQSEIAYKQK HDAAKGFSDY AHMKELPEIK 151 200 ENSP00000366326/1-1014 HAMEVNKHQS NISYRKDVQD THTYSAELDR PDIKMATQIS KIISNAEYKK ENSBTAP00000053811/1-1015 HAMEVNKHQS NIFYRKDVQD THMYNAELDR PDIKMATQIS KIISDAEYKK ENSTTRP00000008846/1-1011 HAMEVNKHQS HIFYRKDVQD THVYSAELDR PDIKMATQIS KIISNAEYKK bmy_04368T0/1-829 ---------- ---------- ---------- ----MATQIS KIISNAEYKK BACU013777/1-791 HAMEVNKHQS H--------- ---------- ---------- -----AEYKK 201 250 ENSP00000366326/1-1014 GQGIMNKEPA VIGRPDFEHA VEASKLSSQI KYKEKFDNEM KDKKHHYNPL ENSBTAP00000053811/1-1015 GQGVMNKEPA VIGRPDFEHA VEASKLSSQI KYKEKFDSEM KDKKHLYNPL ENSTTRP00000008846/1-1011 GQGVMNKEPA VIGRPDFEHA VEASKLSSQV KYKEKFDNEM KDKKHHYNPL bmy_04368T0/1-829 GQGVMNKEPA VIGRPDFEHA VEASKLSSQV KYKEKFDNEM KDKKHHYNPL BACU013777/1-791 GQGVMNKEPA VIGRPDFEHA VEASKLSSQV KYKEKFDNEM KDKKHHYNPL 251 300 ENSP00000366326/1-1014 ESASFRQNQL AATLASNVKY KKDIQNMHDP VSDLPNLLFL DHVLKASKML ENSBTAP00000053811/1-1015 ESASFRQSQL ATALASNVKY KKDIQNMHDP VSGLPN-LFL DHALKVSKML ENSTTRP00000008846/1-1011 ESASFRQSQL ATALASNVKY KKDIQNMHDP VSDLPN-LFL NHALKTSKML bmy_04368T0/1-829 ESASFRQSQL ATALASNVNY KKDIQNMHDP VSDLPN-LFL NHALKASKML BACU013777/1-791 ESASFRQSQL ATALASNVNY KKDIQNMHDP VSDLPN-LFL NHALKASKML 301 350 ENSP00000366326/1-1014 SGREYKKLFE ENKGMYHFDA DAVEHLHHKG NAVLQSQVKY KEEYEKNKGK ENSBTAP00000053811/1-1015 SGREYRKVFE ENKGLYHFDV DAAEHLHHKG NAMLQSQVKY KEEYEKNKGK ENSTTRP00000008846/1-1011 SGREYRKLFE ENKGMYHFDT DAVEHLHHKG NAMLQSQVKY KEEYEKNKGK bmy_04368T0/1-829 SGREYRKLFE ENKGMYHFDT DAVEHLHHKG NAMLQSQVKY KEEYEKNKGK BACU013777/1-791 SGREYRKLFE ENKGMYHFDT DAVEHLHHKG NAMLQSQVKY KEEYEKNKGK 351 400 ENSP00000366326/1-1014 PMLEFVETPS YQASKEAQKM QSEKVYKEDF EKEIKGRSSL DLDKTPEFLH ENSBTAP00000053811/1-1015 SMLEFVETPS YQVSKEAQKM QSEKVYREDF EKDIKGRSSM DLDKTPEFLH ENSTTRP00000008846/1-1011 SMLEFVETPS YQASKEAQKM QSEKVYREDF EKEIKGRSSM DLDKTPEFLH bmy_04368T0/1-829 SMLEFVETPS YQASKEAQKM QSEKVYREDF EKEIKGRSSM DLDKTPEFLH BACU013777/1-791 SMLEFVETPS YQASKEAQKM QSEKVYREDF EKEIKGRSSM DLDKTPEFLH 401 450 ENSP00000366326/1-1014 VKYITNLLRE KEYKKDLENE IKGKGMELNS EVLDIQRAKR ASEMASEKEY ENSBTAP00000053811/1-1015 VKYITNLLKE KEYKKDLENE IKGKGMELNS EVLDIQRAKR ASEMTSEKEY ENSTTRP00000008846/1-1011 VKYITSLLKE -EYKKDLENE IKREG-ELNS EVLDIQRAKR ASEMASEKEY bmy_04368T0/1-829 VKYITSLLKE KEYKKDLENE IKGKGMELNS EVLDIQRAKR ASEMASEKEY BACU013777/1-791 VKYITSLLKE KEYKKDLENE IKGRGMELNS EVLDIQRAKR ASEMASEKEY 451 500 ENSP00000366326/1-1014 KKDLESIIKG KGMQAGTDTL EMQHAKKAAE IASEKDYKRD LETEIKGKGM ENSBTAP00000053811/1-1015 KKDLESEIKG KGMQVGTDTL GIQHAKRASE MASEKDYKRD LETEIRGKGM ENSTTRP00000008846/1-1011 KKDLESKIKG KGMQVGTDTL GIQHAKRASE IASEKDYKRD LETEIRGKGM bmy_04368T0/1-829 KKDLESKIKG KGMQVGTDTL GIQHAKRASE IASEKDYKRD LETEIRGKGM BACU013777/1-791 KKDLESKIKG KGMQVGTDTL GIQHAKRASE IASEKDYKRD LETEIRGKGM 501 550 ENSP00000366326/1-1014 QVSTDTLDVQ RAKKASEMAS QKQYKKDLEN EIKGKGMQVS MDIPDILRAK ENSBTAP00000053811/1-1015 QVSTDTLDIQ RAKKASEMAS QKEYKKDLEN EIKGKGMQVS MDIPDMLRAK ENSTTRP00000008846/1-1011 QVSTGTLDIQ RAKKASEMAS QKEYKKDLEN EIKGKGMQVS MDIPDMLRAK bmy_04368T0/1-829 QVSTGTLDIQ RAKKASEMAS QKEYKKDLEN EIKGKGMQVS MDIPDMLRAK BACU013777/1-791 QVSTGTLDIQ RAKKASEMAS QKEYKKDLEN EIKGKGMQVS MDIPDMLRAK 551 600 ENSP00000366326/1-1014 RTSEIYSQ-R KYKDEAEKML SNYSTIADTP EIQRIKTTQQ NISAVFYKKE ENSBTAP00000053811/1-1015 RASEIYSQ-K KYKDEAEKML SSYSTVADTP EIQRIKTTQQ NISAVFYKKE ENSTTRP00000008846/1-1011 RASEIYSHXK KYKDEAEKML SSYSTVADTP EIQRIKTTQQ NISAVLYKKE bmy_04368T0/1-829 RASEIYSQ-K KYKDEAEKML SSYSTVADTP EIQRIKTTQQ NISAVFYKKE BACU013777/1-791 RASEIYSQ-K KYKDEAEKML SSYSTVADTP EIQRIKTTQQ NISAVFYKKE 601 650 ENSP00000366326/1-1014 VGAGTAVKDS PEIERVKKNQ QNISSVKYKE EIKHATAISD PPELKRVKEN ENSBTAP00000053811/1-1015 VGAGTAVKDT PEIERVKKNQ QNISSVKYKE EVKHATAISD PPELKRVKEN ENSTTRP00000008846/1-1011 VGAGTAVKDT PEIERVKKNQ QNISSVKYKE EMNHGTAISD PPELKRVKEN bmy_04368T0/1-829 VGAGTAVKDT PEIERVK--- -------YKE EMNHGTAISD PPELKRVKEN BACU013777/1-791 VGAGTAVKDT PEIERVKKNQ QNISS----- ---------- ---------- 651 700 ENSP00000366326/1-1014 QKNISNLQYK EQNYKATPVS MTPEIERVRR NQEQLSAVKY KGELQRGTAI ENSBTAP00000053811/1-1015 QKNISNLRYK EPCDRATPVS MTPEIERVRR NQEQLSTVKY RGEIKQATAI ENSTTRP00000008846/1-1011 QKNISNLRYK EQCYTATPVS TTPEIERVRK NQEQLSTVKY RGEIKQATAI bmy_04368T0/1-829 QKNISNLRYK EQCHTATPVS TTPEIERV-- --------KY RGEIKQATAI BACU013777/1-791 ---------- ---------- ---------- --------KY RGEIKQATAI 701 750 ENSP00000366326/1-1014 SDPPELKRAK ENQKNISNVY YRGQLGRATT LSVTPEMERV KKNQENIS-- ENSBTAP00000053811/1-1015 SDPPELKRVK ENQKNLSNVY YKSQMGRATA LSVTPEMERV KKNQENIS-- ENSTTRP00000008846/1-1011 SDPPELKRVK ENQKNLSNVY YKGQPGRATA LSITPEMERV KKNQENIS-- bmy_04368T0/1-829 SDPPELKRVK ENQKNLSNVY YKGQLGRATA LSITPEMERV KKNQENISSA BACU013777/1-791 SDPPELKRVK ENQKNLSN-- ---------- ---------- ---------- 751 800 ENSP00000366326/1-1014 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053811/1-1015 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008846/1-1011 ---------- ---------- ---------- ---------- ---------- bmy_04368T0/1-829 SCFIHLGLSQ RACPLYYLLA NLFSPCENKI DFQETFVIYA ITSVFESSKV BACU013777/1-791 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000366326/1-1014 ---------- ---------- ---------- ---------- -----SVKYT ENSBTAP00000053811/1-1015 ---------- ---------- ---------- ---------- -----SVKYT ENSTTRP00000008846/1-1011 ---------- ---------- ---------- ---------- -----SVKYT bmy_04368T0/1-829 FDVGQIKGNR GMFRMHSFSV MVGNGEIEKW KNKFRFHLAL DFSCLSVKYT BACU013777/1-791 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000366326/1-1014 QDHKQMKGRP SLILDTPAMR HVKEAQNHIS MVKYHEDFEK TKGRGFTPVV ENSBTAP00000053811/1-1015 QDQKQMKGRP SLILDTPGLR HVKEAQNRIS MVKYHEDFEK TKGRGFTPVV ENSTTRP00000008846/1-1011 QDQRQMKGRP SLILDTPGLR HVKEAQNHIS MVKYHEDFEK TKGRGFTPVV bmy_04368T0/1-829 QDQRQMKGRP SLILDTPGLR HVKEAQNHIS MVKYHEDFEK TKGRGFTPVV BACU013777/1-791 ---------- ---------- ---------- -VKYHEDFEK TKGRGFTPVV 901 950 ENSP00000366326/1-1014 DDPVTERVRK NTQVVSDAAY KGVHPHIVEM DRRPGII-V- DLKVWRTDPG ENSBTAP00000053811/1-1015 DDPVTERVRR NTQVVSDAAY KGVHPHIVEM DRRPGIIVVK DLKVWRTDPG ENSTTRP00000008846/1-1011 DDPVTERVRK NTQVVSDAAY KGVHPHIVEM DRRPGII-VE DLKVWRTDPG bmy_04368T0/1-829 DDPVTERVRK NTQVVSDAAY KGVHPHIVEM DRRPGII-V- DLKVWRTDPG BACU013777/1-791 DDPVTERVRK NTQVVSDAAY KGVHPHIVEM DRRPGII-V- DLKVWRTDPG 951 1000 ENSP00000366326/1-1014 SIFDLDPLED NIQSRSLHML SEKA--SHYR RHWSRSHS-- -SSTFGTGLG ENSBTAP00000053811/1-1015 SIFDIDPLED NIQSRSLHML SEKA--NLYR RQRSRSYS-- -SSTFGTGLG ENSTTRP00000008846/1-1011 SIFDIDPLED NIQSRSLHML SEKA--NHYR RQRSRSHS-- -SSTFGTGLG bmy_04368T0/1-829 SIFDIDPLED NIQSRSLHML SEKA--NHYR RQRSRSHS-- -SSTFGTGLG BACU013777/1-791 SIFDIDPLED NIQSRSLHML SAPVLPGAYQ QSHSQGYGYM HQTSLSSMRS 1001 1050 ENSP00000366326/1-1014 DDRSEISEIY PS-FSCCSEV TRPSDEGAPV LPGAYQQSHS QGYGYMHQTS ENSBTAP00000053811/1-1015 DDKSEISEIY RS-FSCCSEV TRPSDEGAPV LPGAYQQSHS QGYGYMHQTS ENSTTRP00000008846/1-1011 DDKSEISEIY PS-FSCCSEV TRPSDEGAPV LPGAYQQSHS QGYGYMHQTS bmy_04368T0/1-829 DDKSEISEIY PS-FSCCSEV TR-------- ---------- ---------- BACU013777/1-791 MQHSPNLRTY RAMYDYS--- ---------- ---------- ---------- 1051 1100 ENSP00000366326/1-1014 VSSMRSMQHS PNLRTYRAMY DYSAQDEDEV SFRDGDYIVN VQPIDDGWMY ENSBTAP00000053811/1-1015 LSSVRSMQHS PNLRTYRAMY DYSAQDEDEV SFRDGDYIVN VQPIDDGWMY ENSTTRP00000008846/1-1011 LSSMRSMQHS PNLRTYRAMY DYSAQDEDEV SFRDGDYIVN VQPIDDGWMY bmy_04368T0/1-829 ---------- ---------- ---------- ---------- --PSDE---- BACU013777/1-791 ---------- ---------- ---AQDEDEV SFRDGDYIVN VQPIDDGWMY 1101 1150 ENSP00000366326/1-1014 GTVQRTGRTG MLPANYIEFV N ENSBTAP00000053811/1-1015 GTVQRTGKTG MLPANYIEFV N ENSTTRP00000008846/1-1011 GTVQRTGKTG MLPANYIEFV N bmy_04368T0/1-829 GGIRR----- ---------- - BACU013777/1-791 GTVQRTGKTG MLPANYIEFV N