KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:32 2014 Check: 00 .. Name: ENSP00000366506/1-397 Len: 449 Check: 592 Weight: 1.00 Name: ENSBTAP00000053816/1-359 Len: 449 Check: 9385 Weight: 1.00 Name: ENSTTRP00000000428/1-395 Len: 449 Check: 5317 Weight: 1.00 Name: bmy_19054T0/1-449 Len: 449 Check: 4388 Weight: 1.00 Name: BACU014032/1-359 Len: 449 Check: 7983 Weight: 1.00 // 1 50 ENSP00000366506/1-397 MAPNGTASSF CLDSTACKIT ITVVLAVLIL ITVAGNVVVC LAVGLNRRLR ENSBTAP00000053816/1-359 MAANGTASSS CLDPTAFKVT VTVVLILLIL ITIAGNVVVC LAVGLNRRLR ENSTTRP00000000428/1-395 MASNGTTSSF CLDPAALKIT VSVVLTLFIL ITIAGNVVVC LAVGLNRRLR bmy_19054T0/1-449 MASNGTTSSF CLDPAALKIT VSVVLTLLIL ITIAGNVVVC LVVGLNRRLR BACU014032/1-359 MASNGTTSSF CLDPAALKIT VSVVLTLLIL ITIAGNVVVC LAVGLNRRLR 51 100 ENSP00000366506/1-397 NLTNCFIVSL AITDLLLGLL VLPFSAIYQL SCKWSFGKVF CNIYTSLDVM ENSBTAP00000053816/1-359 SLTNCFIVSL AITDLLLGLL VLPFSAFYQL SCQWSFGKVF CNIYTSLDVM ENSTTRP00000000428/1-395 SLTNCFIVSL AITDLLLGLL VLPFSAFHQL SCRWSFGKVF CNIYTSLDVM bmy_19054T0/1-449 SLTNCFIVSL AITDLLLGLL VLPFSAFHQL SCRWNFGKVF CNIYTSLDVM BACU014032/1-359 SLTNCFIVSL AITDLLLGLL VLPFSAFHQL SCRWNFGKVF CNIYTSLDVM 101 150 ENSP00000366506/1-397 LCTASILNLF MISLDRYCAV MDPLRYPVLV TPVRVAISLV LIWVISITLS ENSBTAP00000053816/1-359 LCTASILNLF MISLDRYCAV TDPLRYPVLV TPVRVAVSLV LIWVISITLS ENSTTRP00000000428/1-395 LCTASILNLF MISLDRYCAV TDPLRYPMLV TPVRVTISLV LIWVISITLS bmy_19054T0/1-449 LCTASILNLF MISLDRYCAV TDPLRYPMLV TPVRVTISLV LIWVISITLS BACU014032/1-359 LCTASILNLF MISLDRYCAV TDPLRYPMLV TPVRVTISLV LIWVISVTLS 151 200 ENSP00000366506/1-397 FLSIHLGWNS RNETSKGNHT TSKCKVQVNE VYGLVDGLVT FYLPLLIMCI ENSBTAP00000053816/1-359 FLSIHLEWNS RPENHSDSHT IPKCKVQVNL VYGLVDGLVT FYLPLLVMCI ENSTTRP00000000428/1-395 FLSIHLGWNS RTETSSANHT IPKCKVQVNL VYGLVDGLVT FYLPLLVMCI bmy_19054T0/1-449 FLSIHLGWNS RTETSSANHT IPKCKVQVNL VYGLVDGLVT FYLPLLVMCI BACU014032/1-359 FLCIHLGWNS RTETSSANHT IPKCKVQVNL VYGLVDGLVT FYLPLLVMCI 201 250 ENSP00000366506/1-397 TYYRIFKVAR DQAKRINHIS SWKAATIREH KATVTLAAVM GAFIICWFPY ENSBTAP00000053816/1-359 TYYRIFRIAR EQARRIHNVG PWRAATLREH KATVTLAAVM GAFIVCWLPY ENSTTRP00000000428/1-395 TYYRIFKIAW DQAKRIHNVG SWRAATIREH KATVTLAAVM GAFIICWFPY bmy_19054T0/1-449 TYYRIFKIAW DQAKRIHNVG SWRAATIREH KATVTLAAVM GAFIICWFPY BACU014032/1-359 TYYRIFKIAW DQAKRIHNVG SRRTATIREH KATVTLAAVM GAFIICWFPY 251 300 ENSP00000366506/1-397 FTAFVYRGLR GDDAINEVLE AIVLWLGYAN SALNPILYAA LNRDFRTGYQ ENSBTAP00000053816/1-359 FTVFVYRGLR GDSAVDKTVE DVVLWLGYAN SALNPVLYAA LNRDFRTAYQ ENSTTRP00000000428/1-395 FTVFVYRGLK GDNAINETFE AVVLWLGYAN SALNPILYAA LNRDFRTAYQ bmy_19054T0/1-449 FTVFVYRGLK GDNAVNETFE AVVLWLGYAN SALNPILYAA LNRDFRTAYQ BACU014032/1-359 FTVFVYRGLK GDNAINETFE AVVLWLGYAN SALNPILYAA LNRDFRTAYQ 301 350 ENSP00000366506/1-397 QLFCCRLANR NSHKTSLRSN ASQLSRTQSR EPRQQEEKPL KLQVWSGTEV ENSBTAP00000053816/1-359 QLFRCSPAGQ DARRTSLGSN SSQLVRHPGQ GPRWPEERPL RLQVWSGTEL ENSTTRP00000000428/1-395 QLFCCSPTDH GTHRTSLKSN SSQLTRIPSQ GPRWQEERPL RLQVWSGTEV bmy_19054T0/1-449 QLFCCSPTDH NTHRTSLKSN SSQLMRIPSQ GPRWQEERPL RLQVWSGTEV BACU014032/1-359 QLFCCSPADH DTHRTSLKSN SSQLMRIPSQ GPRWQEERPL RLQVWSGTEV 351 400 ENSP00000366506/1-397 TAPQGATDRP WLCLPECWSV ELTHSFIHLF IHSFANIH-- ---------- ENSBTAP00000053816/1-359 TAPQGATDR- ---------- ---------- ---------- ---------- ENSTTRP00000000428/1-395 TAPQGATDRP CLCPPECWSV ---PTHPSIF IHSFTNIC-- ---------- bmy_19054T0/1-449 TAPQGATDRK AAMSCTLCSS NLLSCCKSLW VLRFLQRHVG GPLEEQPGEP BACU014032/1-359 TAPQGGTDR- ---------- ---------- ---------- ---------- 401 450 ENSP00000366506/1-397 ---------- ---------- ---------P IPTTCQEL-- --------- ENSBTAP00000053816/1-359 ---------- ---------- ---------- ---------- --------- ENSTTRP00000000428/1-395 ---------- ---------- ---------Q LPITCQEQC- --------- bmy_19054T0/1-449 LTEELLRTLA QESDSDSHPV IRTFSTPSQA VPEKSLTLIS WTVVYRCNK BACU014032/1-359 ---------- ---------- ---------- ---------- ---------