KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:36 2014 Check: 00 .. Name: ENSP00000280325/1-236 Len: 465 Check: 6327 Weight: 1.00 Name: ENSTTRP00000004341/1-284 Len: 465 Check: 2661 Weight: 1.00 Name: ENSBTAP00000053822/1-241 Len: 465 Check: 1422 Weight: 1.00 Name: bmy_11675T0/1-265 Len: 465 Check: 3926 Weight: 1.00 Name: BACU004577/1-414 Len: 465 Check: 6995 Weight: 1.00 // 1 50 ENSP00000280325/1-236 MP-------- ---------- ---------- ---------- ---------- ENSTTRP00000004341/1-284 VPGDYSKRVY QGVRVKHTVK DLLAEKRSKH TSNSRFNGSD SSTQPPFGPM ENSBTAP00000053822/1-241 ---------- ---------- ---------- ---------- ----PSVFPL bmy_11675T0/1-265 MPGLRWKYHF T--------- -----RGETW LQQRCLDFLR GNFCPFVFPL BACU004577/1-414 MP-------- ---------- ---------- ---------- ---------- 51 100 ENSP00000280325/1-236 --GSPVTSGY YGVRRSFLSD SDFHNSKQFS NDVYTSSVGK PFPCESSAGQ ENSTTRP00000004341/1-284 P-GSPVMSGY YGIRRSLLTD SDFHNSKQFA NDACTRTVAK DIACESSAGQ ENSBTAP00000053822/1-241 ATGSPVMSGY YGVRRAFLSD PDFHNTKQFA NDACTSSAAK PFACESSAGQ bmy_11675T0/1-265 ATGSRVMSGY YGDRRSLLSD SDFHNSKHFA NDACTRTVAK DFACESSAGQ BACU004577/1-414 --GSRVMSGY YGDRRSLLSD SDFHNSKQFA NDACTRSVAK DFACESSAGQ 101 150 ENSP00000280325/1-236 SHAALLEPYF PQEPYGDYRP PALTPNAGSL FSASPLPPLL PPPFPGDPAH ENSTTRP00000004341/1-284 GHPAHLDSYF P-ELYGDHRP TALTPNSDSL ISASPLPQLL PLPFPSEPAH ENSBTAP00000053822/1-241 GHAALLDPYF P-EPYGDHRP TALTPNSGTL FSASALPPLL PPPFPSDPAH bmy_11675T0/1-265 GHPAHLDSYF P-EFYGDHRP TALTPNSGSL FSASPLPQLL PPPFPSEPAH BACU004577/1-414 GHPAHLDSYF P-EPYGDHRP TALTPNSGSL FSASPLPQLL PPPFPSEPAH 151 200 ENSP00000280325/1-236 FLFRDSWEQT LPDGLSQPDP VSADALLTLP PSTSCLSQLE SGSIAQHRGS ENSTTRP00000004341/1-284 FVLRDSWEQM VPEDLSQPDP VPTNALQSLA PSTGCLSQLE SGSIAQHRSS ENSBTAP00000053822/1-241 FALRDSWEQT VPEGLSQPDP VPADTLQSLA PSTGSLSQLE SGGAAQHRSA bmy_11675T0/1-265 FVLRDSWERT VPEGLSQPDP VPADALQSLT PSTGCLSQLE SGSTAQHRSS BACU004577/1-414 FLLRNSWERT VPEGLSQPDP VPADALQSLA PSTGCLSQLE SGSTAQHRSS 201 250 ENSP00000280325/1-236 SWGSSLAGAQ SYSLHALEDL HHTPGYPTPP PYPFTPFMTV SNDLPPKVG- ENSTTRP00000004341/1-284 GWAAPLAGVQ SYSLHTLEDL YHVQGYPTPS PYPFTSFMTM SDDPPPKVG- ENSBTAP00000053822/1-241 GWGGPLTGVQ SYSLHALEDL YHTQGYPTPA PYPFTSFMTM SNDPPPKVG- bmy_11675T0/1-265 SWGAPLAGVQ SYPLHTLEDL YHMQGYPTPS PYPFTSFMTM SNDPPPKVG- BACU004577/1-414 SWGAPLAGVQ SYSLHTLEDL YHMQGYPTTS PYPFTSFMTM SNDPPPKLSG 251 300 ENSP00000280325/1-236 --------PL SPDEEA---- ---------- ---------- ---------- ENSTTRP00000004341/1-284 --------PF SLDEGA---- ---------- ---------- ---------- ENSBTAP00000053822/1-241 --------PF SQDEGA---- ---------- ---------- ---------- bmy_11675T0/1-265 --------PF SPDEGA---- ---------- ---------- ---------- BACU004577/1-414 GNNVHLSDPV PPSSAGQYFE PEPIPSTPNY FQPREFSSCV SCEENPGFLD 301 350 ENSP00000280325/1-236 -------DTG SLHDPSP--- ---------- ---------- -----WVKED ENSTTRP00000004341/1-284 -------DTS VLQDPSP--- ---------- ---------- -----WTKED ENSBTAP00000053822/1-241 -------DTS ALQDTSP--- ---------- ---------- -----WTKED bmy_11675T0/1-265 -------DTS VLQDPSP--- ---------- ---------- -----WTKED BACU004577/1-414 QIFDSYLQTE THPDPSPNSM QSTPHYFPDS FQAAPFCFNQ SLTPGWPSDS 351 400 ENSP00000280325/1-236 GSIA------ ---------- ---------- ----WG---- ---------S ENSTTRP00000004341/1-284 GSLA------ ---------- ---------- ----WG---- ---------A ENSBTAP00000053822/1-241 GSLA------ ---------- ---------- ----WG---- ---------T bmy_11675T0/1-265 GSLA------ ---------- ---------- ----WG---- ---------G BACU004577/1-414 STLSGSLDCS YSPVQLPSYT PENYDSALSL DTRNWGYASE DYSYPHLPSH 401 450 ENSP00000280325/1-236 YECRRAY--- ---------- ---------- ---------- ---------- ENSTTRP00000004341/1-284 YECRRAY--- ---------- ---------- ---------- ---------- ENSBTAP00000053822/1-241 YECRRAY--- ---------- ---------- ---------- ---------- bmy_11675T0/1-265 I--------- ---------- ---------- ---------- ---------- BACU004577/1-414 TQCNRSSSAT ASVCCSACCE AEHSDTFRAS ECFSYPGTDY GTFTPSAAAS 451 500 ENSP00000280325/1-236 ---------- ----- ENSTTRP00000004341/1-284 ---------- ----- ENSBTAP00000053822/1-241 ---------- ----- bmy_11675T0/1-265 ---------- ----- BACU004577/1-414 SDFCRRETNW DICYS