KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:36 2014 Check: 00 .. Name: ENSBTAP00000053825/1-279 Len: 444 Check: 9307 Weight: 1.00 Name: ENSP00000302289/1-327 Len: 444 Check: 5548 Weight: 1.00 Name: ENSTTRP00000012335/1-329 Len: 444 Check: 259 Weight: 1.00 Name: BACU016730/1-394 Len: 444 Check: 851 Weight: 1.00 Name: bmy_04167T0/1-329 Len: 444 Check: 8781 Weight: 1.00 // 1 50 ENSBTAP00000053825/1-279 QR-------- ---------- ---------- ---------- ---------- ENSP00000302289/1-327 MRALPGLLEA RARTPRLLLL QCLLAAARPS SADGSAPDSP FTSPPLREEI ENSTTRP00000012335/1-329 MRSLPSLRGP RA-PPLPLLL LCLLAPVRRS SEDGRTPAAS FTSLPVREEM BACU016730/1-394 ---------- ---------- ---------- ---------- ---------M bmy_04167T0/1-329 MRSLLSLRGP RA-PPLPLLL LCLLAPVRRS SEDGRTPAAP FTSLPVREEM 51 100 ENSBTAP00000053825/1-279 ----NNASKE CYISLWLVEH SNMPVEKNIT LERPSNVELI CQFTPSGDLN ENSP00000302289/1-327 MA--NNFSLE SH-NISLTEH SSMPVEKNIT LERPSNVNLT CQFTTSGDLN ENSTTRP00000012335/1-329 MAKYSNLSLE SH-NISLTEH SNMPVEKNIT LERPSNIELT CQFMTSGDLN BACU016730/1-394 MAKYSNLSLE SH-NISLTEH SNMPVEKNIT LERPSNIELT CQFTTSGDLN bmy_04167T0/1-329 MAKYANLSLE SH-NISLTEH SNMPVEKNIT LERPSNIELT CQFTTSGDLN 101 150 ENSBTAP00000053825/1-279 SVNVTWKKGD KLLEGNYLVN ATGGILYTQH RVAVINSKQM GSYSCFFGEK ENSP00000302289/1-327 AVNVTWKKDG EQLENNYLVS ATGSTLYTQY RFTIINSKQM GSYSCFFREE ENSTTRP00000012335/1-329 SVNVTWKKGD ELLENNYLIN ATGSILYTQY MFTIVNSEQM GSYSCFFEEK BACU016730/1-394 SVNVTWRKGD ELLENNYLIN ATGSILYTQY MFTIVNSEQM GSYSCFFEEK bmy_04167T0/1-329 SVNVTWRKGD ELLKNNYLIN ATGSILYTQY MFTIVNSEQM GSYSCFFEEK 151 200 ENSBTAP00000053825/1-279 KQQRGTFNLK VPEINGQNKP LITYLGDSVV LMCKCQDCLP LNWTWYGGNG ENSP00000302289/1-327 KEQRGTFNFK VPELHGKNKP LISYVGDSTV LTCKCQNCFP LNWTWYSSNG ENSTTRP00000012335/1-329 KEQRGTFNFK VPELHEKKKP LITYVGDSVV LMCKCQDCFP LNWTWYRSNG BACU016730/1-394 KEQRGTFNFK VPELHEKKKP LITYVGDSVV LMCKCQDCFP LNWTWYSSNG bmy_04167T0/1-329 KEQRGTFNFK VPELHEKKKP LITYVGDSVV LMCKCQDCFP LNWTWYSSNG 201 250 ENSBTAP00000053825/1-279 SVQVPIGVPV NDKYVISGKH ANETRLKITQ LSEDDQGTYL CHAIFELGES ENSP00000302289/1-327 SVKVPVGVQM NK-YVINGTY ANETKLKITQ LLEEDGESYW CRALFQLGES ENSTTRP00000012335/1-329 SVQVPVGVPM NNKYVINGKN ANETRLKIMQ LSEEDQGSYW CHAIFQLGES BACU016730/1-394 SVQVPVGVPI NNKYVINGKT ANETRLKIMQ LSEEDQGSYW CQAIFQLGES bmy_04167T0/1-329 SVQVPVGVPM NNKYVINGKN ANETRLKIMQ LSEEDQGSYW CHAIFQLGES 251 300 ENSBTAP00000053825/1-279 EGHVKLVVLS YLVPLKVFCA IAAEVVLLVA AILLFEMYTQ KKKKPSDDGK ENSP00000302289/1-327 EEHIELVVLS YLVPLKPFLV IVAEVILLVA TILLCEKYTQ KKKKHSDEGK ENSTTRP00000012335/1-329 EEHVELVVLS YWVPLKAFLG IAVEVVLLVA IILLFEMYTQ KKKKHSDDGK BACU016730/1-394 EEHIEIVVLS YWVPLKAFLG IAAEVVLLVA IILLCEMYTQ KKKKHSDDGK bmy_04167T0/1-329 EEHIEIVVLS YWVPLKAFLG IAAEVVLLVA IILLCEMYTQ KKKKHSDDGK 301 350 ENSBTAP00000053825/1-279 EFEQGEQLKL DDSNGIENSG PRHRKN---- ---------- ---------- ENSP00000302289/1-327 EFEQIEQLKS DDSNGIENNV PRHRKN---- ---------- ---------- ENSTTRP00000012335/1-329 EFEQIEQLKS DDSNGIENNA PRHRKN---- ---------- ---------- BACU016730/1-394 EFEQIEQLKS DDSNGIENNA PRHRKNFTHL AWINTPRRQG GLGPIRIPLL bmy_04167T0/1-329 EFEQIEQLRS DDSNGIENNA PRHRKN---- ---------- ---------- 351 400 ENSBTAP00000053825/1-279 ---------- -----ESVGQ ---------- ---------- ---------- ENSP00000302289/1-327 ---------- -----ESLGQ ---------- ---------- ---------- ENSTTRP00000012335/1-329 ---------- -----ESVGQ ---------- ---------- ---------- BACU016730/1-394 SDLNHQISKD YSVYLEDSGH TLRGLFITDD KGILRQITLN DLHGSRFVDE bmy_04167T0/1-329 ---------- -----ESVGQ ---------- ---------- ---------- 401 450 ENSBTAP00000053825/1-279 ---------- ---------- ---------- ---------- ---- ENSP00000302289/1-327 ---------- ---------- ---------- ---------- ---- ENSTTRP00000012335/1-329 ---------- ---------- ---------- ---------- ---- BACU016730/1-394 TLRLVQAFLY TDKHGEVCPG GWKPGGETVI PDPARKLKYF DKLN bmy_04167T0/1-329 ---------- ---------- ---------- ---------- ----