KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:36 2014 Check: 00 .. Name: ENSBTAP00000053829/1-684 Len: 700 Check: 8349 Weight: 1.00 Name: ENSP00000376686/1-697 Len: 700 Check: 6363 Weight: 1.00 Name: ENSTTRP00000016402/1-699 Len: 700 Check: 9872 Weight: 1.00 Name: bmy_08992T0/1-381 Len: 700 Check: 1561 Weight: 1.00 Name: BACU002029/1-700 Len: 700 Check: 2313 Weight: 1.00 // 1 50 ENSBTAP00000053829/1-684 MGERDRSPAT DREGKTSRSH --YCSSDFGT TPQSSGRSSL VHPSPPASIK ENSP00000376686/1-697 MGERAGSPGT DQERKAGKHH YSYL-SDF-E TPQSSGRSSL V-SSSPASVR ENSTTRP00000016402/1-699 MGERERSPGT GKESKAGRHY YSYCSSDFGA TPQSSGRSSL VHPSSPASIK bmy_08992T0/1-381 ---------- ---------- ---------- ---------- ---------- BACU002029/1-700 MGERERSPDT GKESKAGRHC YSYCSSDFGA TPQSSGRSSL VHPSSPASIK 51 100 ENSBTAP00000053829/1-684 GKHDKKQASD SQVHHHAPRK PSPKCPPNRK GVRAGFRSQS LSRQPFPKDP ENSP00000376686/1-697 RKNPKRQTSD GQVHHQAPRK PSPKGLPNRK GVRVGFRSQS LNREPLRKDT ENSTTRP00000016402/1-699 GKNPKKQISD SQMRHQVPRK PSPKGPPNRR GVPVGFHSQG LNREPLRKDT bmy_08992T0/1-381 ---------- ---------- ---------- ---------- ---------- BACU002029/1-700 GKSPKKQISD SQVHHQVPRK PSPKGPPNRR GVRVGFRSQS LNREPLRKDT 101 150 ENSBTAP00000053829/1-684 DLVTKQVLSA RLLKINELQN EVTELQVKLA ELLKENKALK RLQYRQEKAL ENSP00000376686/1-697 DLVTKRILSA RLLKINELQN EVSELQVKLA ELLKENKSLK RLQYRQEKAL ENSTTRP00000016402/1-699 DLVTKRVLSA RLLKINELQN EVTELQVKLA ELLKENKALK RLQYRQEKAL bmy_08992T0/1-381 ---------- ---------- ---------- ---------- ---------- BACU002029/1-700 DLVTKRVLSA RLLKINELQN EVTELQVKLA ELLKENKALK RLQYRQEKAL 151 200 ENSBTAP00000053829/1-684 NKFEDTENEI SQLIARHNNE ITALKDRLRK SQEKDRANEK RAKETEGELL ENSP00000376686/1-697 NKFEDAENEI SQLIFRHNNE ITALKERLRK SQEKERATEK RVKDTESELF ENSTTRP00000016402/1-699 NKFEDTENEI SQLIARHNNE ITALKERLRK SREKERATEK RVKDTEGELF bmy_08992T0/1-381 ---------- ---------- ---------- ---------- ---------- BACU002029/1-700 NKFEDTENEI SQLIARHNNE ITALKERLRK SQEKERATEK RVKDTEGELF 201 250 ENSBTAP00000053829/1-684 KTKISLQKLK KISEAKHLPE RVDLAKKLAS AELKLDDTER RIKDLSRNLE ENSP00000376686/1-697 RTKFSLQKLK EISEARHLPE RDDLAKKLVS AELKLDDTER RIKELSKNLE ENSTTRP00000016402/1-699 RTKLSLQKLK KISEARHLPE RDDLAKKLVS AELKLDDTER RIKELSRNLE bmy_08992T0/1-381 ---------- ---------- ---------- ---------- ---------- BACU002029/1-700 RTKFSLQKLK KISEARHLPE RDDLAKKLVS AELKLDDTER RIKELSRNLE 251 300 ENSBTAP00000053829/1-684 LSTNSYQRQL LAERKRACEA RDENKLLQKE LQGLKDKLKE KERELDIKNR ENSP00000376686/1-697 LSTNSFQRQL LAERKRAYEA HDENKVLQKE VQRLYHKLKE KERELDIKNI ENSTTRP00000016402/1-699 LSTNSFQRQL LAERKRAYEA HDENKILQNE LQQLHHKLKE KERELDLKNI bmy_08992T0/1-381 ---------- ---------- ---------- ---------- ---------- BACU002029/1-700 LSTNSFQRQL LAERKRAYEA HDENKVLQKE LQQLYHKLKE KERELDIKNI 301 350 ENSBTAP00000053829/1-684 YSNRLPKISP KKEKEFTSTI NAACQSDFTN QCTKGVQTNE DFKLEEYPIT ENSP00000376686/1-697 YSNRLPKSSP NKEKELALRK NAACQSDFAD LCTKGVQTME DFKPEEYPLT ENSTTRP00000016402/1-699 YSNRLPKSSP KKEKEITSKK NAACQSDFTN QCTKEVQTSE DFELEEYPIT bmy_08992T0/1-381 ---------- ---------M VAACQSDFTN QCTKEVQTSE DFELEEYPIT BACU002029/1-700 YSNRLPKSSP KKEKEITSRK NAACQSDFTN QCTKEVQTSE DFELEEYPIT 351 400 ENSBTAP00000053829/1-684 PQTVMCYENK REEPERLSLD MESQERDNLG EAGILNPTVE REDKFAKGQG ENSP00000376686/1-697 PETIMCYENK WEEPGHLTLD LQSQKQDRHG EAGILNPIME REEKFVTDEE ENSTTRP00000016402/1-699 PQTVMCYENK WKEPERLSLH LESQERGDHE EAGILNPIVE REDKFVKDQG bmy_08992T0/1-381 PQTVMCYENK WKEPERLSLD LEPQERDDHE EAGILNPIVE RKDKFVKDQG BACU002029/1-700 PQTVMCYENK WKEPERLSLD LESQERDDHE EAGILNPIVE REDKFVKDQG 401 450 ENSBTAP00000053829/1-684 LRVVKQNVEK LENGWEK-EL AKKPKEKKSL LEREGKPV-- ------EMYQ ENSP00000376686/1-697 LHVVKQEVEK LEDEWEREEL DKKQKEKASL LEREEKPEWE TGRYQLGMYP ENSTTRP00000016402/1-699 LHAVKQEAEK LEDEREREEL AKKQKEKTSL LEREEKPVLE TGRYRMETYQ bmy_08992T0/1-381 LHAVKQEAEK LEDEREREEL AKKQKEKTFL LEREEKPVLE TGRYQMETYQ BACU002029/1-700 LHAVKQEAEK LEDEREREEL AKKQKEKTSL LEREEKPVLE TGRYQMETYQ 451 500 ENSBTAP00000053829/1-684 VQKIDKL--- EEERLKKEML PAKLNEINRE -QDSQNVKYP SLPPLPDLKR ENSP00000376686/1-697 IQNMDKLQGE EEERLKREML LAKLNEIDRE LQDSRNLKYP VLPLLPDFES ENSTTRP00000016402/1-699 IQNTDKLEEE EEERLKREML LAKLNEISRE LQGSRNLKYP SLPLLRDLES bmy_08992T0/1-381 IQNTDKLEEE EEERLKREML LAKLNEISRE LQGSRNLKYP SLPLLPDLES BACU002029/1-700 IQNTDKLEEE EEERLKREML LAKLNEISRE LQGSRNLKYP SLPLLPDLES 501 550 ENSBTAP00000053829/1-684 KLRSPERNPR THMSSGSSER LFNGHHLQDL NLSTTKGDGQ NPGHTRSAAS ENSP00000376686/1-697 KLHSPERSPK TYRFSESSER LFNGHHLQDI SFSTPKGEGQ NSGNVRSPAS ENSTTRP00000016402/1-699 KLRSPERNPK THTFFESSER LFNGHHLQDI SLFSTKGDGQ NPGSIRKPAS bmy_08992T0/1-381 KLRSPERNPK THTFFESSGR LFNGHHLQDI SLFNTKGDGQ NPGNIRKPAS BACU002029/1-700 KLRSPERNPK THTFFESSER LFNGHRLQDT SLFNTKGDGQ NPGGIRKAAS 551 600 ENSBTAP00000053829/1-684 PVELVFGSYV PSFAKTPARS NPVSQKSDLL GFSGNNTEKF SKDGTDSISR ENSP00000376686/1-697 PNEFAFGSYV PSFAKTSERS NPFSQKSSFL DFQRNSMEKL SKDGVDLITR ENSTTRP00000016402/1-699 PDGLAFGSYV PSFAKTLGKS SPVSHKSSLL DFQRNNIEKF SKDSGDLITR bmy_08992T0/1-381 PDELAFGSYV PSFAKTLGKS NPVSQKSSLL DFQRNNIEKF SKDSVDLITR BACU002029/1-700 PGELAFGSYV PSFAKTLGKS SPVSQKSSLL DFQRNNIEEF SKDRVGLITR 601 650 ENSBTAP00000053829/1-684 QERKANLMEL LFGTSGGSSL SSKNSDPNSL AATK-DGDPL DFLPGDKSSW ENSP00000376686/1-697 KEKKANLMEQ LFGASGSSTI SSKSSDPNSV ASSKGDIDPL NFLPGNKGSR ENSTTRP00000016402/1-699 KEKKANLMEQ LFGASGGSSI SSKSSDPHSL AATNGDFDPL NFLPGDKSSR bmy_08992T0/1-381 KEKKANLMEQ LFGASGGSSI SSKSSDPNSL AATNGDFDPL NFLPGDKSSR BACU002029/1-700 KAKKANLMEQ LFGASGGSSV SSKSSDPNSL AATNGDFDPL NFLPGDKSSR 651 700 ENSBTAP00000053829/1-684 GRENRDDDDS LLSEERSFNP SRHRLRRANS KPAVKVVDSV EDEIEEVVLR ENSP00000376686/1-697 DQEHDEDEGF FLSEGRSFNP NRHRLKHADD KPAVKAADSV EDEIEEVALR ENSTTRP00000016402/1-699 GREYDDDNDF FFSEGRSFNP NRHQLKHANT KPAVKG-DSV EDEIEEVALR bmy_08992T0/1-381 GREYDDDDDF FFSEGRSFNP NRHQLKHANN KPAVKAVDSV EDEIEEVALR BACU002029/1-700 GREYDDDDDF FFSEGRSFNP NRHQLKHANN KPAVKAVDSV EDEIEEVALR