KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:22:38 2014 Check: 00 .. Name: ENSP00000369292/1-1589 Len: 1589 Check: 3578 Weight: 1.00 Name: ENSBTAP00000053832/1-1581 Len: 1589 Check: 9187 Weight: 1.00 Name: bmy_09347T0/1-1583 Len: 1589 Check: 9090 Weight: 1.00 Name: BACU016851/1-1583 Len: 1589 Check: 7971 Weight: 1.00 // 1 50 ENSP00000369292/1-1589 MAKQLNLPEN TDDWTKEDVN QWLESHKIDQ KHREILTEQD VNGAVLKWLK ENSBTAP00000053832/1-1581 MAAQLNLPEN TDDWTKEDVN QWLESHKIEQ KHRAILTAQD VSGAILKYLT bmy_09347T0/1-1583 MAAQLNLPDN TDEWTKEDVN QWLESHKIDQ KHREILTAQD VNGANLKYLT BACU016851/1-1583 MAAQLNLPDN TDEWTKEDVN RWLESHKIDQ KHREILTAQD VNGANLKYLT 51 100 ENSP00000369292/1-1589 KEHLVDMGIT HGPAIQIEEL FKELRKTAIE DSIQTSKMGK PSKNAPKDQT ENSBTAP00000053832/1-1581 KDHLVAMGIT FGPAIQIEQL FKELLETSSG DPFQTCKSGK GSKSVPK--- bmy_09347T0/1-1583 KDHLVAMGIT FGPAIQIEHL FKELLETSSG DPFQTSKRGK GSKNVPK--- BACU016851/1-1583 KDHLVAMGIT FGPAIQIEHL FKELLETSSG HPFQTSKRGK GSKNVPK--- 101 150 ENSP00000369292/1-1589 VSQKERRETS KQKQKGKENP DMANPSAMST TAKGSKSLKV ELIEDKIDYT ENSBTAP00000053832/1-1581 -TQQKDGGTS KQKNKKK--S DKVNDSTVST VTKGSKSLKN EFMEDEIDDT bmy_09347T0/1-1583 -KQEKNGETS KQKQKEKEKS DMFNDSTMST VTKGSKSLKN EYMNDEIDDT BACU016851/1-1583 -KQEKNGETS KQKQKEKEKS DMVNDSTMST VTKGSKSLKN EFMNNEIDDT 151 200 ENSP00000369292/1-1589 KERQPSIDLT CVSYPFDEFS NPYRYKLDFS LQPETGPGNL IDPIHEFKAF ENSBTAP00000053832/1-1581 KKKQPSTEPT CMAYPFDEFS DPYRYKLNFK LQPETGPLNL IDPIHEFKAF bmy_09347T0/1-1583 KEEQPSIEPT CVSYPFDEFS DPYRYKLNFI LQPETGPLNL IDPIHEFKGF BACU016851/1-1583 KKEQPSIEPT CVSYPFDEFS DPYRYKLNFN LQPETGPLNL IDPIHEFKGF 201 250 ENSP00000369292/1-1589 TNTATATEED VKMKFSNEVF RFASACMNSR TNGTIHFGVK DKPHGKIVGI ENSBTAP00000053832/1-1581 TNTETGTEED AKMKFSNEVF RFASACMNSR TNGTIHFGVK DKPHGTIVGV bmy_09347T0/1-1583 TNTETATEED VKMKFSNEVF RFASACMNSR TNGTIHFGVK DKPHGKIVGV BACU016851/1-1583 TNTETATEED VKMKFSNEVF RFASACMNSR TNGTIHFGVK DKPHGKIVGV 251 300 ENSP00000369292/1-1589 KVTNDTKEAL INHFNLMINK YFEDHQVQQA KKCIREPRFV EVLLPNSTLS ENSBTAP00000053832/1-1581 EFTTITKEAL IDHFNLMIHQ YFEDHQVQKA KNCIREPRFV EVLLPNSTLS bmy_09347T0/1-1583 EVTTVTKEAL IDHFNLMIHQ YFEDHQVQKA KNCIREPRFV EVLMPNSTPS BACU016851/1-1583 EVTTVTKEAL IDHFNLMIHQ YFEDHQVQKA KNCIREPRFV EVLMPNSTPS 301 350 ENSP00000369292/1-1589 DRFVIEVDII PQFSECQYDY FQIKMQNYNN KIWEQSKKFS LFVRDGTSSK ENSBTAP00000053832/1-1581 DRFVIEVDVV PKYSECEVDY FQIKMQNCSN TIWKQSPNFS VFVRDGASSK bmy_09347T0/1-1583 DRFVIEVDVV PKHSECEHDY FQIKMQNCSK KTWTQSPKFS VFVRDGASSK BACU016851/1-1583 DRFVIEVDVV PKHSECEHDY FQIKMQNCSK KTWTQSPKFS VFVRDGASSK 351 400 ENSP00000369292/1-1589 DITKNKVDFR AFKADFKTLA ESRKAAEEKF RAKTNKKERE GPKLVKLLTG ENSBTAP00000053832/1-1581 DIMKSNMDFK AFKLDLKRLA ESRKEAEEKC RVKTNKKESE GPKLVKLLTG bmy_09347T0/1-1583 DIMKNNAYFT SFKLDLKKLA ESRKEAEEKC RVKTNKKESE GPKLVKLLTG BACU016851/1-1583 DIMKNNAYFT SFKLDLKRLA ESRKEAEEKC RVKTNKKESE GPKLVKLLTG 401 450 ENSP00000369292/1-1589 NQDLLDNSYY EQYILVTNKC HPDQTKHLDF LKEIKWFAVL EFDPESNING ENSBTAP00000053832/1-1581 NQDLLDNSYY DWYILVINKC HPTQIKHLDF LKEIKWFAVL EFDPESVSKG bmy_09347T0/1-1583 NQDLLDNSYY EWYILVINKC HPTQIKHLDF LKEIKWFAVL EFDPESVSKG BACU016851/1-1583 NQDLLDNSYY EWYILVINKC HPTQIKHLDF LKEIKWFAVL EFDPESVSKG 451 500 ENSP00000369292/1-1589 VVKAYKESRV ANLHFPSVYV EQKTTPNETI STLNLYHQPS WIFCNGRLDL ENSBTAP00000053832/1-1581 VVKAYKETRV VNLHFPSLYV EGKTT-TEKI TSLNLYQQLS WIFCNGRLDL bmy_09347T0/1-1583 VVKAYKETRV ANLHFPSLYV EGKTT-NEKI TSLNLYQQLS WIFCNGRLDL BACU016851/1-1583 VVKAYKETRV ANLHFPSLYV EGKTT-NEKI TSLNLYQQLS WIFCNGRLDL 501 550 ENSP00000369292/1-1589 DSEKYKPFDP SSWQRERASD VRKLISFLTH EDIMPRGKFL VVFLLLSSVD ENSBTAP00000053832/1-1581 DSEEYKPLDA SSWQREKASE VRKLISFLTQ EDIMPRGKFL VVFLLLSSVD bmy_09347T0/1-1583 DSEKYKPLDP SSWQREKASE VRKLISFLTR EDIMPRGKFL VVFLLLSSVD BACU016851/1-1583 DSEKYKPLDP SSWQREKASE VRKLISFLTR EDIMPRGKFL VVFLLLSSVD 551 600 ENSP00000369292/1-1589 DPRDPLIETF CAFYQDLKGM ENILCICVHP HIFQGWKDLL EARLIKHQDE ENSBTAP00000053832/1-1581 DPRDPLIETF CAFYQDLKGM ENILCICVDS RICQGWKDLL EARLTTQQDE bmy_09347T0/1-1583 DPRDPLIETF CAFYQDLKGM ENILCICTHS RICQGWKDLL EARLTKQQDE BACU016851/1-1583 DPRDPLIETF CAFYQDLKGM ENILCICTHS RICQGWKDLL EARLTKQQDE 601 650 ENSP00000369292/1-1589 ISSQCISALS LEEINGTILK LKSVTQSSKR LLPSIGLSTV LLKKEEDIMT ENSBTAP00000053832/1-1581 LSNQCVSSLS LEEINGTILK LKSVTQSSKR FLPSIGSSTV LLKKEEDIMT bmy_09347T0/1-1583 LSSQCVSTLS LEEINGTILK LKSVTQSSKR FLPSIGSSTV LLKKEEDIMS BACU016851/1-1583 LSSQCVSTLS LEEINGTILK LKSVTQSSKR FLPSIGSSTV LLKKEEDIMS 651 700 ENSP00000369292/1-1589 ALEIICENEC EGTLLEKDKN KFLEFKASKE EDFYRGGKVS WWNFYFSSES ENSBTAP00000053832/1-1581 ALEILCENEC EDTILEKDKK KLLEFKALKE EDFYRGGKVT WWNFYFSSEN bmy_09347T0/1-1583 ALEILCENEC EGTLLEKDKK KLLEFKASKE EDFYRGGKVS WWNFYFSSEN BACU016851/1-1583 ALEILCENEC EGTLLEKDKK KLLEFKASKE EDFYRGGKVS WWNFYFSSEN 701 750 ENSP00000369292/1-1589 YSSPFVKRDK YERLEAMIQN CADSSKPTST KIIHLYHHPG CGGTTLAMHI ENSBTAP00000053832/1-1581 YSSPFVKRDK YEKLEEMIQR GADSSKSTCV KIIHLYHHPG CGGTTLAMHI bmy_09347T0/1-1583 YSSPFVKRDK YEGLEEMIQN WADSSKPTCV KIIHLFHHPG CGGTTLAMHI BACU016851/1-1583 YSSPFVKRDK YEGLEEMIQN WADSSKPTCV KIIHLFHHPG CGGTTLAMHV 751 800 ENSP00000369292/1-1589 LWELRKKFRC AVLKNKTVDF SEIGEQVTSL ITYGAMNRQE YVPVLLLVDD ENSBTAP00000053832/1-1581 LWELRKKFRC AVLKNKTVDF SEIGEQVTNL ITYGTTNNQE YLPILLLVDD bmy_09347T0/1-1583 LWELRKKFRC AVLKNKRVDF SEIGEQVTNL ITYGTTNNQE YLPVLLLVDD BACU016851/1-1583 LWELRKKFRC AVLKNKRVDF SEIGEQVTNL ITYGTTNNQE YLPVLLLVDD 801 850 ENSP00000369292/1-1589 FEEQDNVYLL QYSIQTAIAK KYIRYEKPLV IILNCMRSQN PEKSARIPDS ENSBTAP00000053832/1-1581 FEEQDNVYLL QASIHTAVAN RYIRYEKPLV IILNCRRSQN PEKSAKISDS bmy_09347T0/1-1583 FEEQDNVYLL QASIQTAVAN RYIRYEKPLV IILNCWRSQN PEKSAKISDS BACU016851/1-1583 FEEQDNVYLL QASIQTAVAN RYIRYERPLV IILNCWRSQH PEKSAKISDS 851 900 ENSP00000369292/1-1589 IAVIQQLSPK EQRAFELKLK EIKEQHKNFE DFYSFMIMKT NFNKEYIENV ENSBTAP00000053832/1-1581 IALIQQLSPK EQRAFELKLK EIEDQHKNFQ DFYSFMIMKT NFNKKYIEDV bmy_09347T0/1-1583 IALIQQLSSK EQRAFELKLK EIEEQHKNFK DFYSFMIMKT NFNKQYIENV BACU016851/1-1583 IALIQQLSSK EQRAFELKLK EIEEQHKNFK DFYSFMIMKT NFDKKYIENV 901 950 ENSP00000369292/1-1589 VRNILKGQNI FTKEAKLFSF LALLNSYVPD TTISLSQCEK FLGIGNKKAF ENSBTAP00000053832/1-1581 VRNILKEQNI STKEAKLFSF LALLNSYVPD TTISLSQCEK FLGITSKKAF bmy_09347T0/1-1583 VRNILKGQNI STKEAKLFSF LALLNSYVPD TTISLSQCEK FLGITNKKAF BACU016851/1-1583 VRNILKGQNI STKEAKLFSF LALLNSYVPD TTISLSQCEK FLGITNKKAF 951 1000 ENSP00000369292/1-1589 WGTEKFEDKM GTYSTILIKT EVIECGNYCG VRIIHSLIAE FSLEELKKSY ENSBTAP00000053832/1-1581 WGTEKFEDKM GTYSTILIKT EVVECGNYCG VRIIHPLIAI RSLEELKISY bmy_09347T0/1-1583 WGTEKLEDKM GTYSTILIKT EVVECGSYCG VRIIHPLIAI RSLEELKISY BACU016851/1-1583 WGTEKLEDKM GTYSTILIKT EVVECGNYCG VRIIHPLIAI RSLEELKISY 1001 1050 ENSP00000369292/1-1589 HLNKSQIMLD MLTENLFFDT GMGKSKFLQD MHTLLLTRHR DEHEGETGNW ENSBTAP00000053832/1-1581 DLDKSQITLD MLTENLFYDT GIGRSKFLED VQTLLLTRQR NENEGEMGTL bmy_09347T0/1-1583 DLHKSQIMLD MLTENVFYET GIGKSKFLED MQTLLLTRQR NEHEGETGTW BACU016851/1-1583 DLDKSQIMLD MLTENVFYET GIGKSKFLED MQTLLLTRQR NEHEGETGTW 1051 1100 ENSP00000369292/1-1589 FSPFIEALHK DEGNEAVEAV LLESIHRFNP NAFICQALAR HFYIKKKDFG ENSBTAP00000053832/1-1581 FSPFIEALHK EEGNVAVKNV LRGGIRRFNP NAFICQALTR HFYIKEKDFD bmy_09347T0/1-1583 FSPFIEALHR DEGNVAVKNV LLEGIHRFNP NAFICQALTR HFYIKEKDFN BACU016851/1-1583 FSPFIEALHT DEGNVAVKNV LLEGIHRFNP NAFICQALTR HFYIKEKDFN 1101 1150 ENSP00000369292/1-1589 NALNWAKQAK IIEPDNSYIS DTLGQVYKSK IRWWIEENGG NGNISVDDLI ENSBTAP00000053832/1-1581 SALHWANQAK KIEPDNSYIS DTLGQVFKSK IRWWMDDNER NRSISVGELS bmy_09347T0/1-1583 SALCWANKAK KLEPDNSYIS DTLGQVYKSK IRWWIEDNGR NRNISVDDLS BACU016851/1-1583 SALYWANKAK KIEPDNSYIS DTLGQVYKSK IRWWIEDNGR NRIISVDDLS 1151 1200 ENSP00000369292/1-1589 ALLDLAEHAS SAFKESQQQS EDREYEVKER LYPKSKRRYD TYNIAGYQGE ENSBTAP00000053832/1-1581 DLLDLAVQAS NAFKESQQQS EDREYEGKER FYQKSKRRYD TYNTAGYLGE bmy_09347T0/1-1583 DLLDSAVHAS NAFKESQQQS EDREYEAKER FYQKSKRRYD TYNIAGYQGE BACU016851/1-1583 DLLDSAVHAS NAFKESQQQS EDREYEAKER FYQKSKRRYD TYNIAGYQGE 1201 1250 ENSP00000369292/1-1589 IEVGLYTIQI LQLIPFFDNK NELSKRYMVN FVSGSSDIPG DPNNEYKLAL ENSBTAP00000053832/1-1581 IEVGLYTIQI LQFIPFFDNK NELSKRDMIN FISGSKDIPG EANNEFKLVL bmy_09347T0/1-1583 IEVGLYTIQI LQLLPFFDNK SELSKRDMIN FISGSNDIPG DPSHEFKVVL BACU016851/1-1583 IEVGLYTIQI LQLLPFFDNK SELSKRDMIN FISGSNDIPG DPSHEFKVVL 1251 1300 ENSP00000369292/1-1589 KNYIPYLTKL KFSLKKSFDF FDEYFVLLKP RNNIKQNEEA KTRRKVAGYF ENSBTAP00000053832/1-1581 KNFISYLTNL KFSLKKSFDF FDEYFVLLKP RNNIKQNEEA KTRRKVAGYF bmy_09347T0/1-1583 KNFIPYLTNL KFSLKKSFDF FDDYFVLLKP RNNIKQNAEA KTRRKVAGYF BACU016851/1-1583 KNFIPYLTNL KFSLKKSFDF FDDYFVLLKP RNNIKQNAEA KTRRKVAGYF 1301 1350 ENSP00000369292/1-1589 KKYVDIFCLL EESQNNTGLG SKFSEPLQVE RCRRNLVALK ADKFSGLLEY ENSBTAP00000053832/1-1581 KKYADIFGPS EELQ-NKDFG SKLSVPLQVE LYRRSLEVLK ADKFSGLLEY bmy_09347T0/1-1583 KKYADIFGPS EESQ-NTDLG PKLSLPLQVE LYRRSLEVLK ADKFSGLLEY BACU016851/1-1583 KKYADIFGPS EELQ-NKDLG PKLSLPLQVE LYRRSLEVLK ADKFSGLLEY 1351 1400 ENSP00000369292/1-1589 LIKSQEDAIS TMKCIVNEYT FLLEQCTVKI QSKEKLNFIL ANIILSCIQP ENSBTAP00000053832/1-1581 LIKAQEDAVH TMEDIMDKYT FLFEQCTVKI LIKEKQNFIL ANIILYCIKP bmy_09347T0/1-1583 LIKTQEDAIR TMEDIMNKYT FLFEQCTVRI LPREKQNFIL ANIILYCIKP BACU016851/1-1583 LIKTQEDAIR TMEDIMNKYT FLFEQCSVRI LPREKQNFIL ANIILYCIKP 1401 1450 ENSP00000369292/1-1589 TSRLVKPVEK LKDQLREVLQ PIGLTYQFSE PYFLASLLFW PENQQLDQHS ENSBTAP00000053832/1-1581 TSKIVKPIKK LKDQLRELLQ QTGMSYRYPE PYFLASLLFW PENQQLDQDS bmy_09347T0/1-1583 TSKIVKPIKT LKGQLREVLQ QVGTTCRYSE PYFLASLLFW PGNQQLDQDS BACU016851/1-1583 TSKIVKPIKT LKDQLREVLQ QVGMTCRYSE PYFLASLLFW PGNQQLDQDS 1451 1500 ENSP00000369292/1-1589 EQMKEYAQAL KNSFKGQYKH MHRTKQPIAY FFLGKGKRLE RLVHKGKIDQ ENSBTAP00000053832/1-1581 RLMEKYASSL ENSFRGQYKH MYRTKQPIAY FFLGKGNSVN RLVHKGKIDQ bmy_09347T0/1-1583 KQMEKYAWSL ENSFRGQYKH MYRTKQPIAY FFLGKGNNMN RLVHKGKIDQ BACU016851/1-1583 KQMEKYAWSL ENSFRGQYKH MYRTKQPIAY FFLGKGNNMN RLVHKGKIDQ 1501 1550 ENSP00000369292/1-1589 CFKKTPDINS LWQSGDVWKE EKVQELLLRL QGRAENNCLY IEYGINEKIT ENSBTAP00000053832/1-1581 CFEKTADINF LWQSGDVWKE KKVQKLLLRL KGRVGNNCLH IEYGINEKIT bmy_09347T0/1-1583 CFRKTADINS LWQSGDVWKE EKVRELLLRL KGRAENNCLY IEYGINEKVT BACU016851/1-1583 CFRKTADINS LWQSGDVWKE EKVRELLLRL KGRAENNCVY IEYGINEKIT 1551 1600 ENSP00000369292/1-1589 IPITPAFLGQ LRSGRSIEKV SFYLGFSIGG PLAYDIEIV ENSBTAP00000053832/1-1581 IPITPAFLGQ LRSGRSIEKV SFYLGFSIGG PLAYDIEII bmy_09347T0/1-1583 IPITPAFFGQ LRSGRSIEKV SFYLGFSFGG PLAYDIEAI BACU016851/1-1583 IPITPAFFGQ LRSGRSIEKV SFYLGFSFGG PLAYDIEAI