KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:22:40 2014 Check: 00 .. Name: ENSBTAP00000053836/1-971 Len: 972 Check: 4099 Weight: 1.00 Name: ENSTTRP00000015436/1-970 Len: 972 Check: 8547 Weight: 1.00 Name: BACU003820/1-939 Len: 972 Check: 5690 Weight: 1.00 Name: bmy_02323T0/1-922 Len: 972 Check: 3047 Weight: 1.00 // 1 50 ENSBTAP00000053836/1-971 MRPEGAGMEL GGCEKGLPEE SRREHWQLLG NLKTTVEGLV SANSPNVWSK ENSTTRP00000015436/1-970 MRAEGAGMEL GGCEEGLPEE SRREHWQLLG NLKTTVEGLV SANSPNVWSK BACU003820/1-939 MRAEGAGMEL GGCEEGLPEE SRREHWQLLG NLKTTVEGLV SANSPNVWSK bmy_02323T0/1-922 MRAEGAGMEL GGCEEGLPEE SRREHWQLLG NLKTTVEGLV SANSPNVWSK 51 100 ENSBTAP00000053836/1-971 YGGLERLCRD MQSILHHGLI HDQVCCRQTD YWQFVKDIRW LSPHSAFHVE ENSTTRP00000015436/1-970 YGGLERLCRD MQSILYHGLI HDQVYCRQTD YWQFVKDIRW LSPHSALHVE BACU003820/1-939 YGGLERLCRD MQSILYHGLI HDQVYCRQTD YWQFVKDIRW LSPHSALHVE bmy_02323T0/1-922 YGGLERLCRD MQSILYHGLI HDQVYCRQTD YWQFVKDIRW LSPHSALHVE 101 150 ENSBTAP00000053836/1-971 KFISLHENGQ SSTDGVSERA VAELWLQHSL QCHCLSAQLR PLLGDRQYIR ENSTTRP00000015436/1-970 KFINLQENGQ SSTDGMSERA VAELWLQHSL QCHCLSAQLR PLLGDRQYIR BACU003820/1-939 KFINLQENGQ SSTDGMSERA VAELWLQHSL QYHCLSAQLR PLLGDRQYIR bmy_02323T0/1-922 K--------- ---------- ---------- ---------- -VRGE----- 151 200 ENSBTAP00000053836/1-971 KFYTDTAFLL SDAHVTAMLQ CLEAVEQNNP RLLAQIDASM FARKHESPLL ENSTTRP00000015436/1-970 KFYTDTAFLL SDSHVTAMLQ CLEAVEQNNP RLLAQIDASM FARKHESPLL BACU003820/1-939 KFYTDTAFLL SDSHVTAMLQ CLEAVEQNNP RLLAQIDASM FARKHESPLL bmy_02323T0/1-922 ----DTAFLL SDSHVTAMLQ CLEAVEQNNP RLLAQIDASM FARKHESPLL 201 250 ENSBTAP00000053836/1-971 VTKSQSLTAL PGSAYTPSTN SGQHSYFGSF SSLHQ-IPHH SLERRSTSFS ENSTTRP00000015436/1-970 VTKSQSLTAL PGSTYTPSTS YAQHSYFGSF SSLHQSIPHH GSERRSTSFS BACU003820/1-939 VTKSQSLTAL PGSAYTPSTS YAQHSYFGSF SSLHQSTPHH GSERRSTSFS bmy_02323T0/1-922 VTKSQSLTAL PGSAYTPSTS YAQHSYFGSF SSLHQSTPHH GSERRSTSFS 251 300 ENSBTAP00000053836/1-971 LSGPPRKPQE SRGPVSAAED QTVLDPLLPI TALAKDSPST PNEMSSSTLT ENSTTRP00000015436/1-970 LCGPCQKPQE SRGHVSPAED QTVQAPLLPI SALAGDSPST PNEMSSSTLT BACU003820/1-939 LCGPCQKPQE SRGHVSPAED QTVQAPLLPI SALAGDSPST PNEMSSSTLT bmy_02323T0/1-922 LCGPCQKPQE SRGHVSPAED QTVQAPLLPI SALAGDSPST PNEMSSSTLT 301 350 ENSBTAP00000053836/1-971 SPLEASWVSS QNDSPSDASE GPEYLAIGNQ DPRGRTASCQ SHSSNTESSS ENSTTRP00000015436/1-970 SPLEAPWVSS QNDSPSDASE GPEYLAIGNQ DPRGRTASCQ SHSSNAESNS BACU003820/1-939 SPLEAPWVIS QNDSPSDASE GPEYLAIGNQ DPRGRTASCQ SRSSNAESNS bmy_02323T0/1-922 SPLEAPWVSS QNDSPSDASE GPEYLAIGNQ DPRGRTTSCQ SRSSNAESNS 351 400 ENSBTAP00000053836/1-971 SNLFSSSSSQ KPDSAASSLG DQEGGRQSQL SSVLRRSSFS EGQTLTVTGG ENSTTRP00000015436/1-970 SNLFSSSSSQ KRDSAASSLG DQEGGGKSQL SNVLRRSSFS EGQTLTVTGG BACU003820/1-939 SNLFSSSSSQ KPDSAASSLG DQEGGGKSQL SNVLRRSSFS EGQTLTVTGG bmy_02323T0/1-922 SNLFSSSSSQ KPDSAASSVG DQEGGGKSQL SNVLRRSSFS EGQTLTVTGG 401 450 ENSBTAP00000053836/1-971 TKKSHTRSHS DTNIASRGAP ESCSDKSKLR GPLSYSGQSS EVSTPSSLYV ENSTTRP00000015436/1-970 TRRSHTRSHS DTN-ASRGAP ESCSDKSKLR GPLSYSGQSS EVSTPSSLYM BACU003820/1-939 TKKSHTRSHS DTNISSRGAP ---------- ---------- ---------- bmy_02323T0/1-922 TKKSHTRSHS DTNISSRGAP ESCSDKSKLR GPLSYSGQSS EVSTPSSLYM 451 500 ENSBTAP00000053836/1-971 EYEGSQYLCS GEGMFRRPSE GQSLISYLSE QDFGSCADLE KENAHFSISE ENSTTRP00000015436/1-970 EYEGSQYLCS GEGMFRRPSE GQSLISYLSE QDFGSCADLE KENAHFSISE BACU003820/1-939 --EGSQYLCS GEGMFRRPSE GQSLISYLSE QDFGSCADLE KENAHFSISE bmy_02323T0/1-922 EYEGSQYLCS GEGMFRRPSE GQSLISYLSE QDFGSCADLE KENAHFSISE 501 550 ENSBTAP00000053836/1-971 SLIAAIELMK CNMMSQCLEE EEGEEDSDRE IQELKQKIRL RRQQIRTKNL ENSTTRP00000015436/1-970 SLIAAIELMK CNMMSQCLEE EEGEEDSDRE IQELKQKIRL RRQQIRTKNL BACU003820/1-939 SLIAAIELMK CNMMSQCLEE EEGEEDSDRE IQELKQKIRL RRQQIRTKNL bmy_02323T0/1-922 SLIAAIELMK CNMMSQCLEE EEGEEDSDRE IQELKQKIRL RRQQIRTKNL 551 600 ENSBTAP00000053836/1-971 LPGYQEMEHG SFRLTSSSSQ FSSRDSAQFS DSGSADDEVD EFEIQDADIR ENSTTRP00000015436/1-970 LPVYQETEYG SFRVTSSSSQ FSSRDSAQFS DSGSA-DEVD EFEIQDADIR BACU003820/1-939 LPVYQETEYG SFRVTSSSSQ FSSRDSAQFS DSGSA-DEVD EFEIQDADIR bmy_02323T0/1-922 LPVYQETEYG SFRVTSSSSQ FSSRDSAQFS DSGSA-DEVD EFEIQDADIR 601 650 ENSBTAP00000053836/1-971 RSTPSNSKSF ISSQSFSHCF LHSTSAEAVA MGLLKQFEGM QLPAASELEW ENSTTRP00000015436/1-970 RSTLSNNKSC VSSQSFSHCF LHSTSAEAVA MGLLKQFEGM QLPAASELEW BACU003820/1-939 RSTPSNNKSF VSSQSFSHCF LHSTSAEAVA MGLLKQFEGM QLPAASELEW bmy_02323T0/1-922 RSTPSNNKSF VSSQSFSHCF LHSTSAEAVA MGLLKQFEGM QLPAASELEW 651 700 ENSBTAP00000053836/1-971 LVPEHDAPQK LLPIPDSLPI SPDDGQHADI YKLRIRVRGN LEWAPPRPQI ENSTTRP00000015436/1-970 LVPEHDAPQK LLPIPDSLPI SPDDGQHADI YKLRIRVRGN LEWAPPRPQI BACU003820/1-939 LVPEHDAPQK LLPIPDSLPI SPDDGQHADI YKLRIRVRGN LEWAPPRPQI bmy_02323T0/1-922 LVPEHDAPQK LLPIPDSLPI SPDDGQHADI YKLRIRVRGN LEWAPPRPQI 701 750 ENSBTAP00000053836/1-971 IFNVHPAPTR KIAVAKQNYR CAGCGIRTDP DYIKRLRYCE YLGKYFCQCC ENSTTRP00000015436/1-970 IFNVHPAPTR KIAVAKQNYR CAGCGIRSDP DYIKRLRYCE YLGKYFCQCC BACU003820/1-939 IFNVHPAPTR KIAVAKQNYR CAGCGIRSDP DYIKRLRYCE YLGKYFCQCC bmy_02323T0/1-922 IFNVHPAPTR KIAVAKQNYR CAGCGIRSDP DYIKRLRYCE YLGKYFCQCC 751 800 ENSBTAP00000053836/1-971 HENAQMVIPS RILRKWDFSK YYVSNFSKDL LIKIWNDPLF NVQDINSALY ENSTTRP00000015436/1-970 HENAQMVIPS RVLRKWDFSK YYVSNFSKDL LIKIWNDPLF NVQDINSALY BACU003820/1-939 HENAQMVIPS RVLRKWDFSK YYVSNFSKDL LIKIWNDPLF NVQDINSALY bmy_02323T0/1-922 HENAQMVIPS RVLRKWDFSK YYVSNFSKDL LIKIWNDPLF NVQDINSALY 801 850 ENSBTAP00000053836/1-971 RKVKLLNHVR LLRIQLYHMK NMFKTCRLAK ELLDAFDTVP GHLTEDLHLY ENSTTRP00000015436/1-970 RKVKLLNQVR LLRVQLCHMK NMFKTCRLAK ELLDSFDTVP GHLTEDLHLY BACU003820/1-939 RKVKLLNQVR LLRVQLCHMK NMFKTCRLAK ELLDSFDTVP GHLTEDLHLY bmy_02323T0/1-922 RKVKLLNQVR LLRVQLCHMK NMFKTCRLAK ELLDSFDTVP GHLTEDLHLY 851 900 ENSBTAP00000053836/1-971 SLNDLTATRK GELGPRLAEL TRAGAAHVER CVLCQAKGFI CEFCQNEDDI ENSTTRP00000015436/1-970 SLNDLTAARK GELGPRLADL TRAGAAHVER CMLCQAKGFI CEFCQNADDI BACU003820/1-939 SLNDLTAARK GELGPRLADL TKAGAAHVER CMLCQAKGFI CEFCQNADDI bmy_02323T0/1-922 SLNDLTAARK GELGPRLADL TKAGAAHVER CMLCQAKGFI CEFCQNADDI 901 950 ENSBTAP00000053836/1-971 IFPFELHKCR ICEECKACYH KTCFKSGSCP RCERLQARRE LLAKQSLESY ENSTTRP00000015436/1-970 IFPFELHKCR TCEECKACYH KACFKSGSCP RCERLQARRE LLAKQSLESY BACU003820/1-939 IFPFELHKCR TCEECKACYH KACFKSGSCP RCERLQARRE LLAKQSLESY bmy_02323T0/1-922 IFPFELHKCR TCEECKACYH KACFKSGSCP RCERLQARRE LLAKQSLESY 951 1000 ENSBTAP00000053836/1-971 MSDYEEEPTE ALALEATDLE TT ENSTTRP00000015436/1-970 MSDSEEEPTE ALALEAAILE TT BACU003820/1-939 MSDYEEEPTE ALALEAAVLE TT bmy_02323T0/1-922 MSDYEEEPTE ALALEAAILE TT