KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:22:43 2014 Check: 00 .. Name: ENSTTRP00000015774/1-450 Len: 460 Check: 1131 Weight: 1.00 Name: ENSP00000250699/1-450 Len: 460 Check: 4745 Weight: 1.00 Name: ENSBTAP00000053843/1-459 Len: 460 Check: 961 Weight: 1.00 Name: BACU004956/1-378 Len: 460 Check: 5243 Weight: 1.00 Name: bmy_03653T0/1-429 Len: 460 Check: 1344 Weight: 1.00 // 1 50 ENSTTRP00000015774/1-450 MGPGSHRLS- ------LGLL LLLPLLP--- XXXXXXXXXX XXXXXXXXXX ENSP00000250699/1-450 MGLRSHHLS- ------LG-L LLLFLLPA-- ECLGAEGRLA LKLFRDLFAN ENSBTAP00000053843/1-459 MGPGSHHLSL GLSVSSLGLL LLLPLLPGPL ECLGAEGRLA HKLFRDLFAN BACU004956/1-378 MGPGSHRLSL SFSVSSLGLL LLLPLLP--- ECFGAEGRLA HKLFRDLFAN bmy_03653T0/1-429 ---------- ---------- ---------- -CFGAEGRLA HKLFRDLFAN 51 100 ENSTTRP00000015774/1-450 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000250699/1-450 YTSALRPVAD TDQTLNVTLE VTLSQIIDMD ERNQVLTLYL WIRQEWTDAY ENSBTAP00000053843/1-459 YTSALRPVAD TDQALNVTLE VTLSQIIDMD ERNQVLTLYL WIRQEWTDAY BACU004956/1-378 YTSALRPVAD TDQALNVTLE VTLSQIIDMD ERNQVLTLYL WIRQEWTDAY bmy_03653T0/1-429 YTSALRPVAD TDQALNVTLE VTLSQIIDMD ERNQVLTLYL WIRQEWTDAY 101 150 ENSTTRP00000015774/1-450 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XADAQAPASA STNVVLRHDG ENSP00000250699/1-450 LRWDPNAYGG LDAIRIPSSL VWRPDIVLYN KADAQPPGSA STNVVLRHDG ENSBTAP00000053843/1-459 LRWDPDTYGG LDAIRIPSSL -WRPDIVLYN KADAQAPASA STNVVLRHDG BACU004956/1-378 LRWDPDAYGG LDAIRIPSSL VWRPDIILYN K--------- ---------- bmy_03653T0/1-429 LRWDPDAYGG LDAIRIPSSL VWRPDIILYN KADAQAPASA STNVVLRHDG 151 200 ENSTTRP00000015774/1-450 AVRWDAPAIT RSSCRVDVSA FPFDAQRCGL TFGSWTHGGH QLDVQTRGAA ENSP00000250699/1-450 AVRWDAPAIT RSSCRVDVAA FPFDAQHCGL TFGSWTHGGH QLDVRPRGAA ENSBTAP00000053843/1-459 AVRWDAPAIT RSSCRVDVSA FPFDAQRCGL TFGSWTHGGH QLDVRPRGAA BACU004956/1-378 ---------- ---------- ---------- -YG------- ---------- bmy_03653T0/1-429 AVRWDAPAIT RSSCRVDVSA FPFDAQRCGL TFGSWTHSGH QLDVQPRGAA 201 250 ENSTTRP00000015774/1-450 ASLADFVENV EWRVLGMPAR RRVLTYGCCS EPYPDVTFTL LLRRRAAAYV ENSP00000250699/1-450 ASLADFVENV EWRVLGMPAR RRVLTYGCCS EPYPDVTFTL LLRRRAAAYV ENSBTAP00000053843/1-459 ASLADFVENV EWRVLGMPAR RRVLTYGCCS EPYPDVTFTL LLRRRAAAYV BACU004956/1-378 ---------- --RVLGMPAR RRVLTYGCCS EPYPDVTFTL LLRRRAAAYV bmy_03653T0/1-429 ASLADFVENV EWRVLGMPAR RRVLTYGCCS EPYPDVTFTL LLRRRAAAYV 251 300 ENSTTRP00000015774/1-450 CNLLLPCVLI SLLAPLAFHL PADSGEKVSL GVTVLLALTV FQLLLAESMP ENSP00000250699/1-450 CNLLLPCVLI SLLAPLAFHL PADSGEKVSL GVTVLLALTV FQLLLAESMP ENSBTAP00000053843/1-459 CNLLLPCVLI SLLAPLAFHL PADSGEKVSL GVTVLLALTV FQLILAESMP BACU004956/1-378 CNLLLPCVLI SLLAPLAFHL PADSGEKVSL GVTVLLALTV FQLLLAESMP bmy_03653T0/1-429 CNLLLPCVLI SLLAPLAFHL PADSGEKVSL GVTVLLALTV FQLLLAESMP 301 350 ENSTTRP00000015774/1-450 PAESVPLIGK YYMATMTMVT FSTALTILIM NLHYCGPSAR PVPAWARTLL ENSP00000250699/1-450 PAESVPLIGK YYMATMTMVT FSTALTILIM NLHYCGPSVR PVPAWARALL ENSBTAP00000053843/1-459 PAESVPLIGK YYMATMTMVT FSTALTILIM NLHYCGPSAR PVPAWARALL BACU004956/1-378 PAESVPLIGK YYMATMTMVT FSTALTILIM NLHYCGPSAR PVPAWARALL bmy_03653T0/1-429 PAESVPLIGK YYMATMTMVT FSTALTILIM NLHYCGPSAR PVPAWARALL 351 400 ENSTTRP00000015774/1-450 LGRLARGLCV RERGEPCGQS RPPESSPSPQ PPDREAGPPA GPCHEPRCLC ENSP00000250699/1-450 LGHLARGLCV RERGEPCGQS RPPELSPSPQ SPEGGAGPPA GPCHEPRCLC ENSBTAP00000053843/1-459 LGRLARGLCV RERGEPCGQS RPPESSPSPQ PPDRGTGPPA GPCHEPRCLC BACU004956/1-378 LGRLARGLCV RERGESCGQS RPPESAPSPQ PPDREAGPPA GPCREPRCLC bmy_03653T0/1-429 LGRLARGLCV RQRGESCGQS RSPESSPSPQ PPDREAGPPA GPCREPRCLC 401 450 ENSTTRP00000015774/1-450 HQEALLRHVA TITNTFHRHR AAQRCHEEWK RLARVMDRFF LGIFFSMALV ENSP00000250699/1-450 RQEALLHHVA TIANTFRSHR AAQRCHEDWK RLARVMDRFF LAIFFSMALV ENSBTAP00000053843/1-459 HQEALLRHVA TIANAFHSHR AAQRRHEDWK RLARVMDRFF LGIFFSMALV BACU004956/1-378 HQEALLRHVA TITNTFHRHR AAQRCHEDWK RLARVMDRFF LGIFFSMALV bmy_03653T0/1-429 HQEALLRHVA TITNTFHRHR AAQRCHEDWK RLARVMDRFF LGIFFSMALV 451 500 ENSTTRP00000015774/1-450 MSLLVLVQAL ENSP00000250699/1-450 MSLLVLVQAL ENSBTAP00000053843/1-459 MSLLVLVRAL BACU004956/1-378 MSLLVLVQAL bmy_03653T0/1-429 MSLLVLVQAL