KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:00 2014 Check: 00 .. Name: ENSP00000358742/1-245 Len: 304 Check: 9578 Weight: 1.00 Name: ENSBTAP00000053891/1-243 Len: 304 Check: 2371 Weight: 1.00 Name: ENSTTRP00000005334/1-302 Len: 304 Check: 2205 Weight: 1.00 Name: bmy_19315T0/1-204 Len: 304 Check: 3591 Weight: 1.00 Name: BACU004045/1-204 Len: 304 Check: 3955 Weight: 1.00 // 1 50 ENSP00000358742/1-245 ---------- ---------- ---MAEG--- ---------- ---------- ENSBTAP00000053891/1-243 ---------- ---------- ---MAEG--- ---------- ---------- ENSTTRP00000005334/1-302 MKKLVVPIES KWKTEKKKRM NHNVKEGMAG LLGDVMNNKK SLIKIKEYKE bmy_19315T0/1-204 ---------- ---------- ---MQTG--- ---------- ---------- BACU004045/1-204 ---------- ---------- ---MQTG--- ---------- ---------- 51 100 ENSP00000358742/1-245 ---------- ---EKNQDFT FKMESPSDSA VVLPSTPQAS ANPSSPYTNS ENSBTAP00000053891/1-243 ---------- ---EVKQD-- FKMESPSNSA LMLPSTPQAG ANPPSPNSSS ENSTTRP00000005334/1-302 VWLIFPFCDF CFLEVKQD-- FKMESPSASA VVLPSTPQAG ANPPSPRTSS bmy_19315T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU004045/1-204 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000358742/1-245 SRKQPMSATL RERLRKTRFS FNSSYNVVKR LKVESEENDQ TFSEKPASST ENSBTAP00000053891/1-243 SRKQPMSATL RERLRKTRSS FNSCYSVVKR LKVESEENDQ TFSEKSAPST ENSTTRP00000005334/1-302 SRKQPMSATL RERLRKTRSS FNSCYGVVKR LKVESEENDQ TFSEKPAPST bmy_19315T0/1-204 ----PMSATL RERLRKTRFS FNSCYSVVKR LKVESEENDQ TFSEKPAPST BACU004045/1-204 ----PMSATL RERLRKTRFS FNSCYGVVKR LKVESEENDQ TFSEKPAPST 151 200 ENSP00000358742/1-245 EENCLEFQES FKHIDSEFEE NTNLKNTLKN LNVCESQSLD SGSCSALQNE ENSBTAP00000053891/1-243 EESCLEFHEN FKHIDSEFEE STCLKDTFKN INVCESKSLD TESCSDLQND ENSTTRP00000005334/1-302 EENCLEFQEN FKHIDSEFEE STYLKNTFKN INACASKSLD SESCSDLQND bmy_19315T0/1-204 EENCLEFQEN FKHTDSEFEE STYLKNTFKN INACASKSLD SESCSBLRND BACU004045/1-204 EENCLEFQEN FKHTDSEFEE STYLKNTFKN INACASKSLD SESSSDLRND 201 250 ENSP00000358742/1-245 FVSEKLPKQR LNAEKAKLVK QVQEKEDLLR RLKLVKMYRS KNDLSQLQLL ENSBTAP00000053891/1-243 FMNENLPKDE LNKEKAKLMK LIEEKEDLLR RLKLVKMYRS KNDLSQLQLL ENSTTRP00000005334/1-302 FMSENLPKHG LNKEKAKLVK QIQEKEELLR RLKLVKMYRS KNDLSQLQML bmy_19315T0/1-204 FMNENLPKHG LNKEKAKLVK QIQEKEDLLR RLKLVKMYRS KNDLSQLQML BACU004045/1-204 FMNENLPKHG LNKEKAKLVK QIQEKEDLLR RLKLVKMYRS KNDLSQLQML 251 300 ENSP00000358742/1-245 IKKWRSCSQL LLYELQSAVS EENKKLSLTQ LIDHYGLDDK LLHYNRSEEE ENSBTAP00000053891/1-243 IEKWRSCSQQ LLYELQSAMS EENKKLSLTQ LIDHYGLDDK LLHYNRNEEE ENSTTRP00000005334/1-302 IKKWRSCSQL LLYELQSAMS EENKKLSLTQ LIDHYGLDDK LLHYNRNEEE bmy_19315T0/1-204 IKKWRSCSQL LLYELQSAMS EENKKLSLTQ LIDHYGLDDK LLHYNRNEEE BACU004045/1-204 IKKWRSCSQL LLYELQSAMS EENKKLSLTQ LIDHYGLDDK LLHYNRNEEE 301 350 ENSP00000358742/1-245 FIDV ENSBTAP00000053891/1-243 FIGV ENSTTRP00000005334/1-302 FIGV bmy_19315T0/1-204 FIGV BACU004045/1-204 FIGV