KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:01 2014 Check: 00 .. Name: ENSP00000327417/1-453 Len: 454 Check: 7818 Weight: 1.00 Name: ENSTTRP00000007335/1-452 Len: 454 Check: 2411 Weight: 1.00 Name: BACU014929/1-384 Len: 454 Check: 446 Weight: 1.00 Name: ENSBTAP00000053900/1-307 Len: 454 Check: 3331 Weight: 1.00 Name: bmy_16580T0/1-336 Len: 454 Check: 2953 Weight: 1.00 // 1 50 ENSP00000327417/1-453 MASPSLPGSD CSQIIDHSHV PEFEVATWIK ITLILVYLII FVMGLLGNSA ENSTTRP00000007335/1-452 MASPSRPGSD CSQVIDHSHV PEFEVASWIK ITLILVYLAI FVVGVLGNSV BACU014929/1-384 MASPSRPGSD CSHVIDHSHV PGFEVASWIK ITLILVYLAI FVVGILGNSV ENSBTAP00000053900/1-307 MASPSHPSRD CSQVIDHSHV PEFEVATWIK ITLILVYLVI FVVGILGNSV bmy_16580T0/1-336 MASTSRPGSD CSHVIDHSHV PGFEVASWIK ITLILVYLAI FVVGILGNSV 51 100 ENSP00000327417/1-453 TIRVTQVLQK KGYLQKEVTD HMVSLACSDI LVFLIGMPME FYSIIWNPLT ENSTTRP00000007335/1-452 TIRVTQVLQK KGYLQKEVTD HMVSLACSDI LVFLIGMPVE FYSIIWNPLT BACU014929/1-384 TIRVTQVLQK KGYLQKEVTD HMVSLACSDI LVFLVGMPVE FYSIIWNPLT ENSBTAP00000053900/1-307 TIRVTQVLQK KGYLQKEVTD HMVSLACSDI LVFLIGMPME FYSIIWNPLT bmy_16580T0/1-336 TIRVTRVLQK KGYLQKEVTD HMVSLACSDI LVFLVGMPVE FYSIIWNPLT 101 150 ENSP00000327417/1-453 TSSYTLSCKL HTFLFEACSY ATLLHVLTLS FERYIAICHP FRYKAVSGPC ENSTTRP00000007335/1-452 TPSYTVPCKL HTFLFEACSY ATLLHVLTLS FERYIAICHP FRYKAMSGPC BACU014929/1-384 KPSYTVPCKL HTFLFEACSY ATLLHVLTLS FERYIAICHP FRYKAMSGPC ENSBTAP00000053900/1-307 TPSYTVSCKV HTFLFEACSY ATLLHVLTLS FERYIAICHP FRYKAMSGPC bmy_16580T0/1-336 TPSYTVSCKL HTFLFEACSY ATLLHVLTLS FERYIAICHP FRYKAMSGPC 151 200 ENSP00000327417/1-453 QVKLLIGFVW VTSALVALPL LFAMGTEYPL VNVPSHRGLT CNRSSTRHHE ENSTTRP00000007335/1-452 QVKLLIGFVW VTSALVALPL LFAMGVEYPL ANVPSHRGLT CNRSRTRHHE BACU014929/1-384 QVKLLIAFVW VTSALVALPL LFAMGVEYPL VNVPSHRGLT CNRSRTRHHE ENSBTAP00000053900/1-307 QVKLLIGFVW VTSALVALPL LFAMGVEYPL VNVPSHRGLI CNRSRTRHQE bmy_16580T0/1-336 QVKLLIAFVW VTSALVALPL LFAMGVEYPL VNEPSHRGLM CNRSRTRHHE 201 250 ENSP00000327417/1-453 QPETSNMSIC TNLSSRWTVF QSSIFGAFVV YLVVLLSVAF MCWNMMQVLM ENSTTRP00000007335/1-452 QPEISNMSIC TNLSSRWTVF QASIFGAFVI YLVVLASVAF MCWSMMQALT BACU014929/1-384 QPESSNMSIC TNLSSRWTVF QSSIFGAFVI YLVVLFSVAF MCWSMMRALT ENSBTAP00000053900/1-307 QPESSNMSIC TNLSSRWTVF QSSIFSAFVV YLVVLVSVAF MCWSMMQVLR bmy_16580T0/1-336 QPESSNMSIC TNLSSRWTVF QSSIFGAFVI YLVVLFSVAF MCWSMMRALT 251 300 ENSP00000327417/1-453 KSQKGSLAGG TRPPQLRKSE SEESRTARRQ TIIFLRLIVV TLAVCWMPNQ ENSTTRP00000007335/1-452 RSKQGTLARG --QLQVRKSE SEENRSARRQ TIIFLRLIVV TLAVCWMPNQ BACU014929/1-384 RSKQGTLAAQ GQQLQGRKSE SEESRSARRQ TIIFLS---- ---------- ENSBTAP00000053900/1-307 RSKQGTLAAQ GQQLQLRKLE SQESRSARRQ TIIFLM---- ---------- bmy_16580T0/1-336 RSKQGTLAAQ GQQLQGRKSE SQESRSARRQ TIIFLR---- ---------- 301 350 ENSP00000327417/1-453 IRRIMAAAKP KHDWTRSYFR AYMILLPFSE TFFYLSSVIN PLLYTVSSQQ ENSTTRP00000007335/1-452 VRRIMAAARP KHDWTKSYXX XXXXXXXXXX XXXXLSSVVN PLLYNVSSQQ BACU014929/1-384 ---------- -ESWVEGLLG AALTPPPPPP PRHRLQS--- SKLESCLESV ENSBTAP00000053900/1-307 ---------- ----RNEYTL QAATLFPRS- ---------- ---------- bmy_16580T0/1-336 ---------- ---------E ASEVCLPECE DNLCRSS--- --LFSFLDLE 351 400 ENSP00000327417/1-453 FRRVFVQVLC CRLSLQHANH EKRLRVHAHS TTDSARFVQR PLLFA-SRRQ ENSTTRP00000007335/1-452 FRSVFGQVLR CRLTLPHANQ EKRLRAHVAS AADGARSVRR PLIFLASRPN BACU014929/1-384 NLSSL----- ---------- --RLKRHGSE PLHVSSLCFG DLGYGQKSTS ENSBTAP00000053900/1-307 ---------- ---------- ---------- ---------- ---------- bmy_16580T0/1-336 FFSLL----- ---------- ---------- ---------- NLLKAPSSRK 401 450 ENSP00000327417/1-453 SSARRTEKIF LSTFQSEAEP QSKSQSLSLE SLEPNSGAKP ANSAAENGFQ ENSTTRP00000007335/1-452 SSARRTTKVF LSTFQSEAKP EPKPQQLSCE SLDPNSEVKP ANPATENGFQ BACU014929/1-384 PTVRRA---- ---------- ---------- GYVPQWRLCD GWPSHKIAWV ENSBTAP00000053900/1-307 ---------- ---------- ---------- GFLPKS---- ---------- bmy_16580T0/1-336 PS--RT---- ---------- ---------- GFTLL----- ---------- 451 500 ENSP00000327417/1-453 EHEV ENSTTRP00000007335/1-452 EHEV BACU014929/1-384 KWR- ENSBTAP00000053900/1-307 ---- bmy_16580T0/1-336 ----