KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:01 2014 Check: 00 .. Name: ENSP00000384117/1-317 Len: 321 Check: 5074 Weight: 1.00 Name: ENSBTAP00000053901/1-319 Len: 321 Check: 6274 Weight: 1.00 Name: ENSTTRP00000008735/1-266 Len: 321 Check: 634 Weight: 1.00 Name: bmy_05253T0/1-320 Len: 321 Check: 8897 Weight: 1.00 Name: BACU018112/1-282 Len: 321 Check: 4085 Weight: 1.00 // 1 50 ENSP00000384117/1-317 MASAGAERRP GVQEATVVGQ GQLTEEPGS- AQTSECPVAG DQFLVPAHEA ENSBTAP00000053901/1-319 MDSAGAEKRP GAQEGIAVGQ SQLTEVAGGH AQNSECPVMR DQCLVPAHES ENSTTRP00000008735/1-266 MASAGAEKRP GAQEGTALGQ SQLTEVPGGH AQNSECPVMG DQCLVPAHEA bmy_05253T0/1-320 MASAGAEKRP GTQEGTALGQ SQLTEVPGGH AQNSECPVMG DQCLVPAHEA BACU018112/1-282 ---------- ---------- ---------- --------MG DQCLVPAQEA 51 100 ENSP00000384117/1-317 RGTQSEDQRP AGAASESELQ EEGPKLGEER PKPHAGALEE RGPRPVVSIV ENSBTAP00000053901/1-319 CQTQGEDKCP IRSTSEQKIQ -ERLKLEEDR HKPEVEALEE RGPRPMASTV ENSTTRP00000008735/1-266 CQTQGEDKCP TGPVSEPKIQ EERLKLEEER HKPEVQALEE KGPRPMASIV bmy_05253T0/1-320 CQTQGEDKCP TGPVSEPKIQ EERLKLEEER HKPEVQALEE RGPRPMASIV BACU018112/1-282 CQTQGEDKCP TGPVSEPKIQ EERLKLEEER HKPEVQALEE RGPRPMASIV 101 150 ENSP00000384117/1-317 RPRHGPKRKP VKSLSLPGLR AHLKAEAELP PKLPLQEEEP EDSQSEPSPS ENSBTAP00000053901/1-319 RPSHGPKRKP V-NLAGPSHQ AHPRAESELP QGLLLQREEP ENNQSEPSPT ENSTTRP00000008735/1-266 RTSHGLKRKL VPSLPGPSHQ AHPRAEAELP QGMPLQREER ESSQSEPLPS bmy_05253T0/1-320 RTSHGLKRKP V-NLPGPSHQ AHPRAEAEVP QGMPLQREER ESSQSEPSPS BACU018112/1-282 RTSHGLKRKP V-NLPGPSHQ AHPRAEAELP QGIPLQREER ESSQSEPSPS 151 200 ENSP00000384117/1-317 AKQHKKAKKR KSLGAPVLHA VASMVSAPLE TLRLERKAQR LRPLYQYVNY ENSBTAP00000053901/1-319 AKQHKKAKKR KSLGTPVLPV VASTVSAPSV TLGPERKAQR LRPLYQYINY ENSTTRP00000008735/1-266 AKQHKKAKKR KSVGTPVLPV VASTVSASSE TLGLERKAQR LRPLYQYINY bmy_05253T0/1-320 AKQHKKAKKR KSVGTPVLPV VASTVSAPSE TLGLERKAQR LRPLYQYINY BACU018112/1-282 AKQHKKAKKR KSVGTPVLPV VASTVSAPSE TLGLERKAQR LRPLYQYINY 201 250 ENSP00000384117/1-317 CNPELNQAGK GD--GEAEVE AEAELAPVPE EGGVEQLQAL LPLAGELGPG ENSBTAP00000053901/1-319 CNPELNQAGE GDREAEAEVE PESELTMVPE EAGVEKLQAL LPVAGELGSD ENSTTRP00000008735/1-266 CNPELNQARE GDREAEAEVK PESELALIPK ETGVEQL-AL LPTAGELGSG bmy_05253T0/1-320 CNPELNQAGE GDREAEAEVK PESELALVPE ETDVEQLQAL LPTAGELGSG BACU018112/1-282 CNPELNQAGE GDREAEAEVK PESELALVPE ETGVEQLQAL LPTAGELGSG 251 300 ENSP00000384117/1-317 LALPCPSPLV TPTHALAPLG EEAGEEPGGL PSLGVSDH-K AEVDKSTQVD ENSBTAP00000053901/1-319 LTLPCPSMSV PPTHTLVPLG EEASEEPEGL PSLGVSGCLK AEMDKSTQVD ENSTTRP00000008735/1-266 LTLPCPNMFM TPTYTLV--- ---------- ---------- ---------- bmy_05253T0/1-320 LTLPCPNMFM TPTYTLVPLG EEAGKEPGGL PSLGVSGCLK AEMDKSTQVD BACU018112/1-282 LTLPCPNMFM TPTYTLVPLG EEAGKEPGGL PGLGVSDCLK AEMDKSTQVD 301 350 ENSP00000384117/1-317 IDKMLSVCTA PLVPPLSPQY K ENSBTAP00000053901/1-319 INKMLSVCNA PLVPPLSPQY K ENSTTRP00000008735/1-266 ---------- ---------- - bmy_05253T0/1-320 INKMLSVCAA PLVPPLSPQY K BACU018112/1-282 INKMLSVCAA PLVPPFSPQY K