KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:03 2014 Check: 00 .. Name: ENSP00000413073/1-1031 Len: 1076 Check: 7847 Weight: 1.00 Name: ENSBTAP00000053920/1-1021 Len: 1076 Check: 7851 Weight: 1.00 Name: ENSTTRP00000005960/1-1024 Len: 1076 Check: 678 Weight: 1.00 Name: bmy_18771T0/1-1029 Len: 1076 Check: 4193 Weight: 1.00 Name: BACU015680/1-1023 Len: 1076 Check: 7378 Weight: 1.00 // 1 50 ENSP00000413073/1-1031 MPPGRWHAAY PAQAQSSRER GRLQTVKKEE EDESYTPVQA ARPQTLNRPG ENSBTAP00000053920/1-1021 MPPGRWYAVH PAQAKASRER GRLQMVKKEE EDESYTSVPA ARPQTLNRPG ENSTTRP00000005960/1-1024 MPPGRWYAVH PAQAKASRER GRLQMIKKEE EDESYTSVPA ARPQTLNRPG bmy_18771T0/1-1029 MPPGRWYAVH PAQAKASRER GRLHMVKKEE EDESYTSVPA ARPQTLNRPG BACU015680/1-1023 MPPGRWYAVH PAQAKASRER GRLHMVKKEE EDESYASVPA ARPQTLNRPG 51 100 ENSP00000413073/1-1031 QELFRQLFRQ LRYHESSGPL ETLSRLRELC RWWLRPDVLS KAQILELLVL ENSBTAP00000053920/1-1021 QELFRQLFRQ LRYHESSGPL ETLSRLRELC RWWLRPDVLS KAQILELLVL ENSTTRP00000005960/1-1024 QELFRQLFRQ LRYHESSGPL ETLSRLRELC RWWLRPDVLS KAQILELLVL bmy_18771T0/1-1029 QELFRQLFRQ LRYHESSGPL ETLSRLRELC RWWLRPDVLS KAQILELLVL BACU015680/1-1023 QELFRQLFRQ LRYHESSGPL ETLSRLQELC RWWLRPDVLS KAQILELLVL 101 150 ENSP00000413073/1-1031 EQFLSILPGE LRVWVQLHNP ESGEEAVALL EELQRDLDGT SWR------- ENSBTAP00000053920/1-1021 EQFLSILPEE LRTWVQLHHP ESGGEAVALL EELQRDFDET PWR------- ENSTTRP00000005960/1-1024 EQFLSILPGE LRTWVQLHHP ESGGDVVALL EELQRDFYGT PWR------- bmy_18771T0/1-1029 EQFLSILPGE LRTWVQLHHP ESGGDVVALL EELQRDFNGT PWRVIKGPAH BACU015680/1-1023 EQFLSILPGE LRTWVQLHHP ESGGDVVALL EELQRDFDGT PWR------- 151 200 ENSP00000413073/1-1031 ---------- ---------- ---------- -----DPGPA QSPDVHWMGT ENSBTAP00000053920/1-1021 ---------- ---------- ---------- -----DPAPA QSPDVHWMGT ENSTTRP00000005960/1-1024 ---------- ---------- ---------- -----DPALA QSPDVHWMGT bmy_18771T0/1-1029 RSLGLYLLEI GHVACSVSLL SDSHEDPLTT FSSCQDPAPA QSPDVHWMGT BACU015680/1-1023 ---------- ---------- ---------- -----DPAPA QSPDVHWMGT 201 250 ENSP00000413073/1-1031 GALRSAQIWS LASPLRSSSA LGDHLEPPYE IEARDFLAGQ SDTPAAQMPA ENSBTAP00000053920/1-1021 GALRAAQIWP PASPLRSGSA LGDHLQPPYE IGVRDFLAGQ PDPPAAQVPA ENSTTRP00000005960/1-1024 GALQAAQIWP PASPLRSSSA LGDHLQPPYE IGVRDFLAGQ PDPPAAQVSA bmy_18771T0/1-1029 GALRAAQIWP PASPLRSGSA LGDHLQPPYE IGVRDFLAGQ PDPPAAQVPA BACU015680/1-1023 GALRAAQIWP PASPLRSGSA LGDHLLPPYE IGVRDFLAGQ PDPPAAQVPA 251 300 ENSP00000413073/1-1031 LFPREGCPGD QVTPTRSLTA QLQETMTFKD VEVTFSQDEW GWLDSAQRNL ENSBTAP00000053920/1-1021 LCSKEGCADN ---------- --QGTMTFKD VEVTFSQDEW GLLDASQRNL ENSTTRP00000005960/1-1024 LSQREGCSGD LV------TV QPQEAVTFKD VEVTFSQDEW GWLDASQRNL bmy_18771T0/1-1029 LSQREGCSGD LV------TV QPQ------- ---------- ----VSHR-- BACU015680/1-1023 LSQRQGCSGD LV------TV QPQEAVTFKD VEVTFAQDEW GWLDASQRNL 301 350 ENSP00000413073/1-1031 YRDVMLENYR NMASLVGPFT KPALISWLEA REPWGLNMQA AQPKGNPVAA ENSBTAP00000053920/1-1021 YRDVMLENYG NMASVVGPFT KPALISWLEA REPWGLNVQG VQFKGNPGAA ENSTTRP00000005960/1-1024 YRDVMLENYG NVTSLVGPFT KPALISWLEA REPWGLNVQG AHPKRSPSAA bmy_18771T0/1-1029 ---------- ---TFVGPFT KPALISWLEV REPWGLNVQG AHPKGSPSAA BACU015680/1-1023 YRDVMLENYG NMASLVGPFT KPALISWLEV REPWGLNVQG AHPKGSPSAA 351 400 ENSP00000413073/1-1031 PTGDDLQSKT NKFILNQEPL EEAETLAVSS GCP-ATSVSE GIGLRESFQQ ENSBTAP00000053920/1-1021 PAGDELHVKT DKFILKPEPL EEAVTLAMPS GCHGAATVSE GPGLRESIAQ ENSTTRP00000005960/1-1024 PAGNELHVKT DKFILKHEPL EE----AMPS GCHGAANVSE GTGLRESFAQ bmy_18771T0/1-1029 PAGDELHVKT DKFILKREPL EE----AMPS GCHGAANVSQ GTGLRESFAQ BACU015680/1-1023 PAGGELHVKT DKFILKREPL EE----AMPS GCHGAANVSQ GTGLRESFAQ 401 450 ENSP00000413073/1-1031 KSRQKDQCEN PIQVRVKKEE TNFSHRTGKD SEVSG-SNSL DLKHVTYLRV ENSBTAP00000053920/1-1021 KSGLKERCGN PTQVRVKKEE TNSSHGAGKD CEDSGRSNSL HLRHITYLRG ENSTTRP00000005960/1-1024 KSRLKEQCGN PIQVTVKKEE TNSSYGTGKD CEESGRSNSL HLKHITCLRG bmy_18771T0/1-1029 KSRLKEQCGN PIQVRVKKEE TNSSHRTGKD CEESGRSNSL HLKHITCLRG BACU015680/1-1023 KSRLKEQCGN PIQVRVKKEE TNSSHRTGED CEESGRSNSL HLKHITCLRG 451 500 ENSP00000413073/1-1031 SGRKESLKHG CGKHFRMSSH HYDYKKYGKG LRHMIGGFSL HQRIHSGLKG ENSBTAP00000053920/1-1021 PRRKQSLKHG YGKHFRGSSY HYDYKEYGKG LRRMMGGFSL HQRIHAGLKG ENSTTRP00000005960/1-1024 PRKKQSLKHG YGKHFRGSSY HCDYKEYGKG LRRVIGGFSL HQRIHTGLKG bmy_18771T0/1-1029 PRRKQSLKHG YGKHFRGSSY HCDYKEYGKG LRRVIGGFSL HQRVHAGLKG BACU015680/1-1023 PRRKQSLKHG YGKHFRGSSY HCDYKEYGKG LRRMIGGFSL HQRVHAGLKG 501 550 ENSP00000413073/1-1031 NKKDVCGKDF SLSSHHQRGQ SLHTVGVSFK CSDCGRTFSH SSHLAYHQRL ENSBTAP00000053920/1-1021 KAKDAHGKDF SLSSHHQHGQ NLHVVGTLYK CSDCGRTFSR SSHLVCHQRL ENSTTRP00000005960/1-1024 KAKDAHGKDF SLSSHHQHGQ NLHMVGTLYT CSDCGKTFSH SSHLACHQRL bmy_18771T0/1-1029 KAKDAHGKDF SLSSHHQHGQ NLHVVGTLYK CSDCGRTFSH SSHLACHQRL BACU015680/1-1023 KAKDAHGKDF SLSSHHQHGQ NLHVVGTSYK CSDCGRTFSH SSHLACHQRL 551 600 ENSP00000413073/1-1031 HTQEKAFKCR VCGKAFRWSS NCARHEKIHT GVKPYKCDLC EKAFRRLSAY ENSBTAP00000053920/1-1021 HTQEKPFKCR ACGKAFRWSS NRVRHEKIHT RLKPYKCSLC DKAFRRMSVY ENSTTRP00000005960/1-1024 HTQEKPFKCR ACGKAFRWSS NRVRHEKIHT GLKPYKCSLC DKAFRRMSAY bmy_18771T0/1-1029 HTQEKPFKCR ACGKAFRWSS NRVRHEKIHT GLKPYKCSLC DKAFRRMSAY BACU015680/1-1023 HTQEKPFKCR ACGKAFRWSS NRVRHEKIHT GLKPYKCSLC DKAFRRMSAY 601 650 ENSP00000413073/1-1031 RLHRETHAKK KFLELNQYRA ALTYSSGFDH HLGDQSGEKL FDCSQCRKSF ENSBTAP00000053920/1-1021 RLHQETHAKQ KYLESTQDEE ALTCVSDFDH HLRDQSGERL FDCSQCRKSF ENSTTRP00000005960/1-1024 RLHQEIHAKQ KFLESYQHEE ALSCGSGFDH HLRDQNGEKL FDCSQCRKFF bmy_18771T0/1-1029 RLHQETHAKQ KFLESNQDEE ALTCGSGFDH HLRDQSGEKL FDCSQCRKSF BACU015680/1-1023 RLHQETHAKQ KFLESNQDEE ALTCGSGFDH HLRDQSGEKL FDCSQCRKSF 651 700 ENSP00000413073/1-1031 HCKSYVLEHQ RIHTQEKPYK CTKCRKTFRW RSNFTRHMRL HEEEKFYKQD ENSBTAP00000053920/1-1021 HCKSYILEHQ RIHTQEKPYK CPKCRKTFRW RSNFTRHMRL HQEEKFYDLD ENSTTRP00000005960/1-1024 HCKSYILEHQ RIHTQEKPYK CIKCRKTFRW RSNFTRHMRL HQEEEVCDPD bmy_18771T0/1-1029 HCKSYVLEHQ RIHTQEKPYK CTKCRKTFRW RSNFTRHMRL HQEEKFCDPD BACU015680/1-1023 HCKSYVLEHQ RIHTQEKPYK CTKCRKTFRW RSNFTRHMRL HQEEKFCDPD 701 750 ENSP00000413073/1-1031 ECREGFRQSP DCSQPQGAPA VEKTFLCQQC GKTFTRKKTL VDHQRIHTGE ENSBTAP00000053920/1-1021 KCREELRQTS NSSQPQSAPT MEKALVCQQC GKTFIRKKTL INHQRIHTGE ENSTTRP00000005960/1-1024 KCREDFRQTS NYSQPQSAPT VEKALLCQQC GKTFNQKKAL IDHQRIHTGE bmy_18771T0/1-1029 KCREDFRQTS NYSQPQSAPT VEKALLCQQC GKTFTRKKAL IDHQRIHTGE BACU015680/1-1023 KCREDFRQTS DYSQPQSAPT VEKALLCQQC GKTFTRKKAL IDHQRIHTGE 751 800 ENSP00000413073/1-1031 KPYQCSDCGK DFAYRSAFIV HKKKHAMKRK PEGGPSFSQD TVFQVPQSSH ENSBTAP00000053920/1-1021 KPYRCHECAE EFPHRSAYIV HKRQHATKRK PEDAPSFSHD RAFQVPQTSP ENSTTRP00000005960/1-1024 KPYQCSECAE EFPHKSAFIV HKRQHAVEIK PEDVPSFSQD GAFQVPQSSH bmy_18771T0/1-1029 KPYRCSECAE EFPHRSAFIV HKRQHAVERK PEDVPSFSQD RAFQVPQSSH BACU015680/1-1023 KPYRCSECAE EFPHRSAFIV HKRQHAVERK PEDVPSFSQD RAFQVPQSSH 801 850 ENSP00000413073/1-1031 SKEEPYKCSQ CGKAFRNHSF LLIHQRVHTG EKPYKCRECG KAFRWSSNLY ENSBTAP00000053920/1-1021 TTEEPYKCSQ CGKVFRNHSF LLIHQRVHTR EKPYKCKECG KSFRWSSNLS ENSTTRP00000005960/1-1024 TTEEPYKCSQ CGKAFRNHSF LLIHQRVHTR EKPYKCRECG KSFRWSSNLS bmy_18771T0/1-1029 TTEEPYKCSQ CGKAFRNHSF LLIHQRVHTR EKPYKCRECG KSFRWSSNLS BACU015680/1-1023 TTEEPYKCSQ CGKAFRNHSF LLIHQRVHTR EKPYKCRECG KSFRWSSNLS 851 900 ENSP00000413073/1-1031 RHQRIHSLQK QYDCHESEKT PNVEPKILTG EKRFWCQECG KTFTRKRTLL ENSBTAP00000053920/1-1021 RHQRTHSLGK LDEYSESEDA LNLQSQVLTG AKPFQCQECG KNFTRKRSLL ENSTTRP00000005960/1-1024 RHQRVHSLGK PYEYHESEDA PNLQSQILTG AKPFWCQECG KSFTRKRSLL bmy_18771T0/1-1029 RHQRIHSLGK PYEYHESEDA PNLQSQILTG AKPFWCQECG KSFTRKRSLL BACU015680/1-1023 RHQRIHSLGK PYEYHESEDA PNLQSQILTG AKPFWCQECG KSFTRKRSLL 901 950 ENSP00000413073/1-1031 DHKGIHSGEK RYKCNLCGKS YDRNYRLVNH QRIHSTERPF KCQWCGKEFI ENSBTAP00000053920/1-1021 DHEGIHSGEK RYKCNLCGKS YDRNYRLVNH QRIHTKERPF KCQCCGKDFI ENSTTRP00000005960/1-1024 DHKGIHSGEK RYKCNLCGKS YDRNYRLVNH QRNHTKERPF KCQWCGKDFI bmy_18771T0/1-1029 DHKGIHSGEK RYKCNLCGKS YDRNYRLVNH QRIHTKERPF KCQWCGKDFI BACU015680/1-1023 DHKGIHSGEK RYKCNLCGKS YDRNYRLVNH QRIHTKERPF KCQWCGKDFI 951 1000 ENSP00000413073/1-1031 GRHTLSSHQR KHTRAAQAER SPPARSSSQD TKLRLQKLKP SEE-MPLEDC ENSBTAP00000053920/1-1021 GKHTLSIHQR KHIRAAQSEN GVAGLSSCQE TGVKLHELKS GQE-NPLEDD ENSTTRP00000005960/1-1024 GRHTLCIHQR KHTRVAQSEC SVAGLSSRQD TGVSLQELKP SEEKKPLEDC bmy_18771T0/1-1029 GRHTLCIHQR KHTRVAQSEC SVAGLSSRQD TGVSLQELKP SEE-KPFEDC BACU015680/1-1023 GRHTLCIHQR KHTRVAQSEC SVAGLSSRQD TGVSLQELKP SEE-KPLEDC 1001 1050 ENSP00000413073/1-1031 KEACSQSSRL TGLQDISIGK KCHKCSICGK TFNKSSQLIS HKRFHTRERP ENSBTAP00000053920/1-1021 EKTCNQRSEL PGLQDIPTRG KCHKCSTCGK TFSKSSQLIS HKRFHTRERP ENSTTRP00000005960/1-1024 EKTCDQNSGL TGLQDIPTGG KCHKCTTCGK TFSKSSQLIS HKRFHTRERP bmy_18771T0/1-1029 EKTCDQNSGL TGLQDIPTGG KRHKCTTCGK TFSKGSQLIS HKRFHTRERP BACU015680/1-1023 EKTCDQNSGL TGLQDIPTGG KCHKCTTCGK TFSKGSQLIS HKRFHTRERP 1051 1100 ENSP00000413073/1-1031 FKCSKCGKTF RWSSNLARHM KNHIRD ENSBTAP00000053920/1-1021 FKCRVCGKTF RWSSNLARHM KNHIRD ENSTTRP00000005960/1-1024 FKCKECGKTF RWSSNLARHM KNHTRD bmy_18771T0/1-1029 FKCRECGKTF RWSSNLARHM KNHTRD BACU015680/1-1023 FKCRECGKTF RWSSNLARHM KNHTRD