KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:05 2014 Check: 00 .. Name: ENSBTAP00000053923/1-505 Len: 577 Check: 9188 Weight: 1.00 Name: ENSP00000307023/1-512 Len: 577 Check: 9496 Weight: 1.00 Name: BACU016786/1-214 Len: 577 Check: 7037 Weight: 1.00 Name: ENSTTRP00000016309/1-517 Len: 577 Check: 7775 Weight: 1.00 Name: bmy_15216T0/1-573 Len: 577 Check: 3593 Weight: 1.00 // 1 50 ENSBTAP00000053923/1-505 ---------- ---------- ---------- ---------- ---------- ENSP00000307023/1-512 ---------- ---------- ---------- ---------- ---------- BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 ---------- ---------- ---------- ---------- ---------- bmy_15216T0/1-573 PAPRGQRRGR AARAGGGARW PLKIQIAAAR RARAAAAVYR TPAARPLCCL 51 100 ENSBTAP00000053923/1-505 ---------- ---------- --MDICESIL ERKRHDSERS TCSILEQNDM ENSP00000307023/1-512 -----MHTPD FAGPDDARAV DIMDICESIL ERKRHDSERS TCSILEQTDM BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 -----MHTPA SAGSGDARAV DIMDICESIL ERKRHDSERS TCSILEQNDM bmy_15216T0/1-573 PAAGTMHTPA SAGSGDARAV DIMDICESIL ERKRHDSERS TCSILEQNDM 101 150 ENSBTAP00000053923/1-505 EAVEALVCMS SWGQRSQKAD LLNIRPLTPV SDSGDVTTSV HVDTVPSELP ENSP00000307023/1-512 EAVEALVCMS SWGQRSQKGD LLRIRPLTPV SDSGDVTTTV HMDAATPELP BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 EAVEALVCMS SWGQRSQKGD LLKIRPLTPV SDSGDVFTIV HVDAATPELP bmy_15216T0/1-573 EAVEALVCMS SWGQRSQKGD LLKIRPLTPV SDSGDVSTIV HVDAATPELP 151 200 ENSBTAP00000053923/1-505 KDFHSLSTLC MTPPQSPDLL EPLTGTVVPP QVTASKAPVV MAVPQASAGA ENSP00000307023/1-512 KDFHSLSTLC ITPPQSPDLV EPSTRTPVSP QVTDSKACTA TDVLQSSAVV BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 KDFHSLSTLC MTPPQSPDLL EPSTGTVVPS QLTDSKAPVV VAVAPASTGA bmy_15216T0/1-573 KDFHSLSTLC MTPPQSPDLL EPSTGTVVPS QVTDSKAPMV VAVPPASTGA 201 250 ENSBTAP00000053923/1-505 ARVLNRTAEG GLPGPKPELL EPAASFPCRA TVTGITGHAG GSPTSAHHSC ENSP00000307023/1-512 ARALSGGAER GLLGL----- EPVPSSPCRA KGTSVIRHTG ESPAACF--- BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 AGVLSRRAES ALPALKAELL EPAVSPHCRA TVTSVICHTG GSPAAAH--V bmy_15216T0/1-573 AGVLSRRSER ALPGLKPELP EPAVSPHCRA TVTSVICHTG GSPASAH--V 251 300 ENSBTAP00000053923/1-505 PTAQTQEHQL SACTEGEAQF LGHVETLQDM HLTDSLLSMN SVSCQPCLHK ENSP00000307023/1-512 PTIQTPDCRL SDSREGEEQL LGHFETLQDT HLTDSLLSTN LVSCQPCLHK BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 PTTQTQAHQL SASAEGEAQF LGHVEAVQDT HLTDSVLSAN SASCQPCLHK bmy_15216T0/1-573 PTTQTQAHQL SANAEGEAQF LGPVEAVQDA HLTRSVLSVN SASCQPCLHK 301 350 ENSBTAP00000053923/1-505 SSGLIPTNKG QQAGWPIGIQ TCSPKNYDND LARKATPLIS IPIPSPPVLC ENSP00000307023/1-512 SGGLLLTDKG QQAGWPGAVQ TCSPKNYEND LPRKTTPLIS VSVPAPPVLC BACU016786/1-214 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016309/1-517 SSGLSPT-KD QQAGWPVAIQ TCSPKNYEND LPRKATPLIS VPIPSPPVLC bmy_15216T0/1-573 SSGLSPTDKG QQAGWPVAIQ TCSPKNYEND LPRKATPLIS VPFPSPPVLC 351 400 ENSBTAP00000053923/1-505 QMIPVTGSSG LLPAVLKPPP QVSAGLVKPV LPHAAPALPP VFVGTSVPQG ENSP00000307023/1-512 QMIPVTGQSS MLPAFLKPPP QLSVGTVRPI LAQAAPAPQP VFVGPAVPQG BACU016786/1-214 -MIPVSGQSG MLPAFLKPPP QVSAGTVKPI LPQAAPVPQP VFVGPSVPQG ENSTTRP00000016309/1-517 QMIPVTGQSG MLSAFLKPSP QVSAGTVKPI LPHAAPVPQP VFVRPSVPQG bmy_15216T0/1-573 QMIPVTGQSG MLSAFLKPPP QVSAGTVKPI LPHAAPVPQP VFVGPSVPQG 401 450 ENSBTAP00000053923/1-505 TMMLLLPQGA LPQPTTCSAG NMPVGNTRFL PLAPAPVFIA SSQSCAPQVD ENSP00000307023/1-512 AVMLVLPQGA LPPPAPCAAN VMAAGNTKLL PLAPAPVFIT SSQNCVPQVD BACU016786/1-214 TVMLVLPQGA LPQPATCSSS GMAVGNTKLL PLAPAPVFIA SNQNCAPQVD ENSTTRP00000016309/1-517 TVMLVLPQGA LLQPATCSSS GMAVGNTKLL PLAPAPVFIA SSQNCAPQVD bmy_15216T0/1-573 TVMLVLPQGA LPQPATCSSS GMAVGNTKLL PLAPAPVFIA SNQNCAPQVD 451 500 ENSBTAP00000053923/1-505 FSRRRNYVCH FPGCRKTYFK SSHLKAHLRT HTGEKPFGCS WDGCNKKFAR ENSP00000307023/1-512 FSRRRNYVCS FPGCRKTYFK SSHLKAHLRT HTGEKPFNCS WDGCDKKFAR BACU016786/1-214 FSRRRNYVCN FPGCQKTYFK SSHLKAHLRT HTGEKPFTCS WDGCDKKFAR ENSTTRP00000016309/1-517 FSRRRNYVCN FPGCQKTYFK SSHLKAHLRT HTGEKPFTCS WDGCDKKFAR bmy_15216T0/1-573 FSRRRNYVCN FPGCQKTYFK SSHLKAHLRT HTGEKPFTCS WDGCDKKFAR 501 550 ENSBTAP00000053923/1-505 SDELSRHRRT HTGEKKFVCP VCDRRFMRSD HLTKHARRHM ATKRVPGWQA ENSP00000307023/1-512 SDELSRHRRT HTGEKKFVCP VCDRRFMRSD HLTKHARRHM TTKKIPGWQA BACU016786/1-214 SDELSRHRRT HTGEKKFVCP VCDRRFMRSD HLTKHARRHV TTKKVPGWQA ENSTTRP00000016309/1-517 SDELSRHRRT HTGEKKFVCP VCDRRFMRSD HLTKHARRHM TTKKIPGWQA bmy_15216T0/1-573 SDELSRHRRT HTGEKKFVCP VCDRRFMRSD HLTKHARRHM TTKKVPGWQA 551 600 ENSBTAP00000053923/1-505 AVGRLNRAAS AEDPGSPLEP ECAPASA ENSP00000307023/1-512 EVGKLNRIAS AESPGSPLVS M--PASA BACU016786/1-214 E--------- -GPPGTGPGL E--PALF ENSTTRP00000016309/1-517 EVGKLNRIAS AENPGSPLVH L--PASA bmy_15216T0/1-573 EVGKLNRIAS AENPGSPLVR L--PASA