KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:23:05 2014  Check: 00 ..

 Name: ENSTTRP00000014376/1-289  Len:    306  Check:  2335  Weight:  1.00
 Name: bmy_16869T0/1-306         Len:    306  Check:  7182  Weight:  1.00
 Name: ENSP00000361433/1-293     Len:    306  Check:  4300  Weight:  1.00
 Name: ENSBTAP00000053924/1-293  Len:    306  Check:  4612  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000014376/1-289  MAMEMRLPVA RKPLSESLGR ETKKHLVVPG DTITTDTGFM RGHGTYMGEE 
bmy_16869T0/1-306         MAMEMRLPVA RKPLSESLGR ETKKHLVVPG DTITTDTGFM RGHGTYMGEE 
ENSP00000361433/1-293     MAMEMRLPVA RKPLSERLGR DTKKHLVVPG DTITTDTGFM RGHGTYMGEE 
ENSBTAP00000053924/1-293  MALEMRLPVA RKPLSESLGR ESKKHLVVPG DTITTDTGFM RGHGTYMGEE 


                          51                                                 100
ENSTTRP00000014376/1-289  KLIASVAGSV ERVNKLVCVK ALKTRYNGEV GDIVVGRITE VQQKRWKVET 
bmy_16869T0/1-306         KLIASVAGSV ERVNKLVCVK ALKTRYHGEV GDIVVGRITE VQQKRWKVET 
ENSP00000361433/1-293     KLIASVAGSV ERVNKLICVK ALKTRYIGEV GDIVVGRITE VQQKRWKVET 
ENSBTAP00000053924/1-293  KLIASVAGSV ERVNKLICVK ALKTRYNGEV GDIVVGRITE VQQKRWKVET 


                          101                                                150
ENSTTRP00000014376/1-289  NSRLDSVLLL SSMNLPGGEL RRRSAEDELA MRGFLQEGDL IS-------- 
bmy_16869T0/1-306         NSRLDSVLLL SSMNLPGGEL RRRSAKDELA MRGFLQEGDL ISVSCTLHSG 
ENSP00000361433/1-293     NSRLDSVLLL SSMNLPGGEL RRRSAEDELA MRGFLQEGDL IS-------- 
ENSBTAP00000053924/1-293  NSRLDSVLLL SSMNLPGGEL RRRSAEDELA MRGFLQEGDL IS-------- 


                          151                                                200
ENSTTRP00000014376/1-289  -----AEVQA VFSDGAVSLH TRSLKYGKLG QGVLVQVSP- LVKRQKS-FH 
bmy_16869T0/1-306         IFMFAAEVQA VFADGAASLH TRSLKYGKLG QGVLVQVSPS LVKRQKTHFH 
ENSP00000361433/1-293     -----AEVQA VFSDGAVSLH TRSLKYGKLG QGVLVQVSPS LVKRQKTHFH 
ENSBTAP00000053924/1-293  -----AEVQA VFSDGAVSLH TRSLKYGKLG QGVLVQVSPS LVKRQKTHFH 


                          201                                                250
ENSTTRP00000014376/1-289  DL-CGASMIL GNTAFFWIY- TPXXXXXXXX XXXXXXXPVS LADREVISRL 
bmy_16869T0/1-306         DLPCGASVIL GNNGFIWIYP TPEHKEEDAG GFIANLEPVS LADREVISRL 
ENSP00000361433/1-293     DLPCGASVIL GNNGFIWIYP TPEHKEEEAG GFIANLEPVS LADREVISRL 
ENSBTAP00000053924/1-293  DLPCGASVIL GNNGFIWVYP TPEHKEDDAG GFIANLEPVS LTDREVISRL 


                          251                                                300
ENSTTRP00000014376/1-289  RNCIVSLATQ RMMLYDTSIL YCYEASLPHQ IKDILKPEIM EEIVMETRQR 
bmy_16869T0/1-306         RNCIISLATQ RMMLYDTSIL YCYEASLPHQ IKDILKPEIM EEIVMETRQR 
ENSP00000361433/1-293     RNCIISLVTQ RMMLYDTSIL YCYEASLPHQ IKDILKPEIM EEIVMETRQR 
ENSBTAP00000053924/1-293  RNCIVSLATQ RMMLYDTSIL YCYEASLPHQ IKDILKPEIM EEIVMETRQR 


                          301                                                350
ENSTTRP00000014376/1-289  LLEQEG 
bmy_16869T0/1-306         LLEQEG 
ENSP00000361433/1-293     LLEQEG 
ENSBTAP00000053924/1-293  LLEQEG