KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:11 2014 Check: 00 .. Name: ENSTTRP00000014725/1-209 Len: 296 Check: 2425 Weight: 1.00 Name: ENSP00000360315/1-210 Len: 296 Check: 6603 Weight: 1.00 Name: ENSBTAP00000053941/1-210 Len: 296 Check: 1071 Weight: 1.00 Name: bmy_22560T0/1-175 Len: 296 Check: 6452 Weight: 1.00 Name: BACU000230/1-286 Len: 296 Check: 3345 Weight: 1.00 // 1 50 ENSTTRP00000014725/1-209 ---------- ---------- ---------- ---------- ---------- ENSP00000360315/1-210 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053941/1-210 ---------- ---------- ---------- ---------- ---------- bmy_22560T0/1-175 ---------- ---------- ---------- ---------- ---------- BACU000230/1-286 MITGHHWGTP PVIAKPSPDL PPSLPQLWLL FTDTLLGYWV TAIHFLSLKC 51 100 ENSTTRP00000014725/1-209 ---------- ---------- ---------- ----MAAQTC DRGRVASTLC ENSP00000360315/1-210 ---------- ---------- ---------- ---MALPQMC DGSHLASTLR ENSBTAP00000053941/1-210 ---------- ---------- ---------- ---SFSVQTC DRARVASTLR bmy_22560T0/1-175 ---------- ---------- ---------- ---------- ---------- BACU000230/1-286 QEENSVHWFL GCEHTLTSGT LTHHLQPPTP PLTLHLTQMC DRGRVASTLC 101 150 ENSTTRP00000014725/1-209 YCMTVTGMVV LVAGTLCFAW WSEEDAGAQP SQPAPPTARP EPEAPGPLFR ENSP00000360315/1-210 YCMTVSGTVV LVAGTLCFAW WSEGDATAQP GQLAPPTEYP VPEGPSPLLR ENSBTAP00000053941/1-210 YCMMVSGTVV LVAGTLCFAW WSEGDAGPPP GQSAPPTGCP EPGAPGALLR bmy_22560T0/1-175 -------MVV LVAGTLCFAW WSEEDAGAQP SQSALPTGRP EPEAPGPLLR BACU000230/1-286 YCVTVSGMVV LVAGTLCFAW WSEEDAGAQP SQPALPTGRP EPEGPGPLLR 151 200 ENSTTRP00000014725/1-209 SVSFFCCGAG GLLLLLSLLW SVKANTKGPP RWDSYHLSRD LYYLTVEPLE ENSP00000360315/1-210 SVSFVCCGAG GLLLLIGLLW SVKASIPGPP RWDPYHLSRD LYYLTVESSE ENSBTAP00000053941/1-210 SVSFFCCGAG GLLLLFGLLW SVKASTQKLP RWDPYHLSRD LYYLTVESSE bmy_22560T0/1-175 SVSFLCCGAG GLLLLFSLLW SVKASTKGPP RWDPYRFSRD L--------- BACU000230/1-286 SVSFLCCGAG GLLLLFSLLW SVKASTKGPP RWDPYHLSRD LYYLTVEPLE 201 250 ENSTTRP00000014725/1-209 KESRXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000360315/1-210 KESCRTPKVV DIPTYEEAVS FPVAEGPPTP PAYPTEEALE PSGSRDALLS ENSBTAP00000053941/1-210 KQSCRTPKVI TVPTYEEAVC CPLAGGPLIL PASPVEEDLE RSASGDALPG bmy_22560T0/1-175 -----TPEAV AIPTYEEAVH CRLAEGPLTP PAYPVEEDPE RSASGDALLG BACU000230/1-286 KESCRTPEMV AIPTYEEAVH CRLAEGPLTP PAYPVEEDPE RSASGDALLG 251 300 ENSTTRP00000014725/1-209 XXXXXXXXXX XXXXXXXXXX XXXXTLGAAC SCPGPVQTAW G---GS ENSP00000360315/1-210 TQPAWPPPSY ESISLALDAV SAETTPSATR SCSGLVQTAR G---GS ENSBTAP00000053941/1-210 AQPPLPPPSY ESLIFAAGGI SGETARGAAC SLTGPVQITE G---GS bmy_22560T0/1-175 AQPPLPPPSY EGLILTDGGI SGETTPGAAC SRPGPVQTAG EEVKGF BACU000230/1-286 AQPPLPPPSY KSLILADNTW GCMLPP---- -RPG--SDCR G---GS