KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:21 2014 Check: 00 .. Name: BACU008730/1-339 Len: 525 Check: 9035 Weight: 1.00 Name: bmy_11629T0/1-434 Len: 525 Check: 4151 Weight: 1.00 Name: ENSP00000353129/1-473 Len: 525 Check: 4747 Weight: 1.00 Name: ENSBTAP00000054055/1-308 Len: 525 Check: 6486 Weight: 1.00 // 1 50 BACU008730/1-339 ---------- ---------- ---------- ---------- ---------- bmy_11629T0/1-434 MRVQLPLGDA SVVAGAEAQP GPPPPPPPPP ASASSRLVQP TPDGARAPPG ENSP00000353129/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054055/1-308 ---------- ---------- ---------- ---------- ---------- 51 100 BACU008730/1-339 --MALKDTGS GGGTILPISE MVSSSSSPGA SAAAAPGPCA PSPFPEVVEL bmy_11629T0/1-434 RTMALKDTGS GGGTILPISE MVSSSSSPGA SAAAAPGPCA PSPFPEVVEL ENSP00000353129/1-473 --MALKDTGS GGSTILPISE MVSSSSSPGA SAAAAPGPCA PSPFPEVVEL ENSBTAP00000054055/1-308 ---------- ---TILPISE MVSSSSSPGA SSAATPGPCV PSPFPEVVEL 101 150 BACU008730/1-339 NVGGQVYVTK HSTLLSVPDS TLASMFSPSS PRGGARRRGE LPRDSRARFF bmy_11629T0/1-434 NVGGQVYVTK HSTLLSVPDS TLASMFSPSS PRGGARRRGE LPRDSRARFF ENSP00000353129/1-473 NVGGQVYVTK HSTLLSVPDS TLASMFSPSS PRGGARRRGE LPRDSRARFF ENSBTAP00000054055/1-308 NVGGQVYVTK HSTLLSVPDS TLASMFSPSS PRGGARRRGE LPRDSRARFF 151 200 BACU008730/1-339 IDRDGFLFRY VLDYLRDKQL ALPEHFPEKE RLLREAEYFQ LTDLVKLLSP bmy_11629T0/1-434 IDRDGFLFRY VLDYLRDKQL ALPEHFPEKE RLLREAEYFQ LTDLVKLLSP ENSP00000353129/1-473 IDRDGFLFRY VLDYLRDKQL ALPEHFPEKE RLLREAEYFQ LTDLVKLLSP ENSBTAP00000054055/1-308 IDRDGFLFRY VLDYLRDKQL ALPEHFPEKE RLLREAEYFQ LTDLVKLLSP 201 250 BACU008730/1-339 KVTKQNSLND EGCQSDLEDN VSQGSSEA-L LRGAAAAAPS GPGAH---GA bmy_11629T0/1-434 KVTKQNSLND EGCQSDLEDN VSQGSSEA-L LRGAAAAAPS GPGAH---GA ENSP00000353129/1-473 KVTKQNSLND EGCQSDLEDN VSQGSSDALL LRGAAAAVPS GPGAHGGGGG ENSBTAP00000054055/1-308 KVTKQNSLND EGCQSDLEDN VSQGSSDALL LRGAAAAAPS GPGAH---SS 251 300 BACU008730/1-339 GGAPDKRSGF LTLGYRGSYT TVRDNQADAK FRRVARIMVC GRIALAKEVF bmy_11629T0/1-434 GGAPDKRSGF LTLGYRGSYT TVRDNQADAK FRRVARIMVC GRIALAKEVF ENSP00000353129/1-473 GGAQDKRSGF LTLGYRGSYT TVRDNQADAK FRRVARIMVC GRIALAKEVF ENSBTAP00000054055/1-308 SSAQDKRSGF LTLGYRGSYT TVRDNQADAK FRRVARIMVC GRIALAKEVF 301 350 BACU008730/1-339 GDTLNESRDP DRPPEKYTSR FYLKFTYLEQ AFDRLSEAGF HMVACNSSGT bmy_11629T0/1-434 GDTLNESRDP DRPPEKYTSR FYLKFTYLEQ AFDRLSEAGF HMVACNSSGT ENSP00000353129/1-473 GDTLNESRDP DRQPEKYTSR FYLKFTYLEQ AFDRLSEAGF HMVACNSSGT ENSBTAP00000054055/1-308 GDTLNESRDP DRPPEKYTSR FYLKFTYLEQ AFDRLSEAGF HMVACNSSGT 351 400 BACU008730/1-339 AAFVNQYRED KIWSSYTEYI FFQT------ ---------- ---------- bmy_11629T0/1-434 AAFVNQYRED KIWSSYTEYI FFRK------ ---------- ---------- ENSP00000353129/1-473 AAFVNQYRDD KIWSSYTEYI FFRPPQKIVS PKQEHEDRKH DKVTDKGSES ENSBTAP00000054055/1-308 AAFVNQYRDD KIWSSYTEYI FFRK------ ---------- ---------- 401 450 BACU008730/1-339 ---------- ---------- ---------- ---------- ---------- bmy_11629T0/1-434 ---------- ---------- ------FALS EFPSSPRPLA DPRRVPARPV ENSP00000353129/1-473 GTSCNELSTS SCDSHSEAST PQDNPSSAQQ ATAHQPNTLT LDRPSKKAPV ENSBTAP00000054055/1-308 ---------- ---------- ---------- ---------- ---------- 451 500 BACU008730/1-339 ---------- ---------- ---------- -------CGL ENVRYFDYEE bmy_11629T0/1-434 SLCAXP---- ---------- ------IAAD TIYGFVPCAL PFGSSFQQLR ENSP00000353129/1-473 QWIPPPDKRR NSELFQTLIS KSRETNLSKK KVCEKLSVEE EMKKCIQDFK ENSBTAP00000054055/1-308 ---------- ---------- ---------- ---------- ---------- 501 550 BACU008730/1-339 IIQVVFKL-- ---------- ----- bmy_11629T0/1-434 STQFSSSPLS ---------- ----- ENSP00000353129/1-473 KIHIPDYFPE RKRQWQSELL QKYGL ENSBTAP00000054055/1-308 ---------- ---------- -----