KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:23 2014 Check: 00 .. Name: BACU009059/1-280 Len: 387 Check: 222 Weight: 1.00 Name: bmy_16802T0/1-353 Len: 387 Check: 571 Weight: 1.00 Name: ENSBTAP00000054078/1-260 Len: 387 Check: 7221 Weight: 1.00 Name: ENSTTRP00000008789/1-318 Len: 387 Check: 6439 Weight: 1.00 // 1 50 BACU009059/1-280 ---------- ---------- ---------P LLLSSGLCLG QVIQAQKGPL bmy_16802T0/1-353 KTKANACKFL ILVPSTQEVW IHAEVLLIDP LLLSSGLCLG RVIQAQKGPL ENSBTAP00000054078/1-260 ---------- ---------- ----MSPVLS ALFCLGLCLG RVIRVPEGPL ENSTTRP00000008789/1-318 ---------- ---------- ----MSPTMA AFFCLGLCLG QVIQAQKGLL 51 100 BACU009059/1-280 PKPSLQARPS SLVPLGKPVT ISCQGPPGAD LYRLEELISR KYLDQAELSI bmy_16802T0/1-353 PKPSLQARPS SLVPLGKPVT ISCQGPPGAD LYRLEELKSR KYLDQAELSI ENSBTAP00000054078/1-260 SEPSLQALPS SLVPLGRPVT IRCQGPPDAE LYRLEKLKSG RYFDQAEIFI ENSTTRP00000008789/1-318 PKPSLQARPG SLVPLGKPVT ISCQGPPGAD LYRLEELISR KYLDQAELSI 101 150 BACU009059/1-280 SAMEQRFVGR YRCSYQSGTS WSPPSNQLEV VATGTSSTPS W-----LPTE bmy_16802T0/1-353 SAMEQRFVGR YRCSYQSGTS WSPPSNQLEL VATGV----- ---------- ENSBTAP00000054078/1-260 SAMERDQAGR YRCSYQIGMR WSPPSSQLEL VATGTSPKPS LSAQPSTAVP ENSTTRP00000008789/1-318 SAMEQRFVGR YRCSYQSGTT WSPPSNQLEL VATGVFTKPS LSAQPSTAVA 151 200 BACU009059/1-280 PPSSVTEFSE ASKKLNQSLV NEVSAAETSR NTTILPKESD PPTEMTADKA bmy_16802T0/1-353 ---DVTLRCQ SQYSFDQFAL YKEGDTGPFK TPERWYQADF PITTVTAAHS ENSBTAP00000054078/1-260 AGVTVTLRCQ SQYGFDQFAL YKEGDTRPFK TPERWYRADF PIVTVTAAHS ENSTTRP00000008789/1-318 PGADVTLRCH SQYGFDQFAL YKEGDTGPYK TPERWYQADF PITTVTAAHS 201 250 BACU009059/1-280 GLYHC---SY QSGDHWSQFS DPLQLVMTGE N--------- ---------- bmy_16802T0/1-353 GTYRCYSFSS RSPYLWSAPS DPLELVVTDV SHSLCLLICF PGGKSPVCSQ ENSBTAP00000054078/1-260 GIYRCYSFSS AYPYLWSAPS DPLKLVVTGT S--------- ---------- ENSTTRP00000008789/1-318 GTYQCYSFSS RSPYLWSAPS DPLELVVTGT S--------- ---------- 251 300 BACU009059/1-280 ----VKLQCF S--------- ---------- ------KIKF EAFLLTKEDG bmy_16802T0/1-353 ERQCVLEKWV PGRLDISEGV WRVETYWANL TSPNSLQSSC LEFSEASKKL ENSBTAP00000054078/1-260 ----VTPSWP P--------- ---------- TEP---PSTV TEFTEASRKL ENSTTRP00000008789/1-318 ----FTPSWL P--------- ---------- TEP---PSSV TEFSEASKKL 301 350 BACU009059/1-280 DHITQNQSST PQDKGYQAIF PLNQVSSTQA E--------- -------RAT bmy_16802T0/1-353 NHSLVNEVSA AETSRNTTSL PKESDPPTED W--------- -------HSR ENSBTAP00000054078/1-260 NHSIANEAST TEASRNITVL PKESDPPTG- ---------- ---------- ENSTTRP00000008789/1-318 NHSLVNEVAT TETSRNITIL PKESDPPTGE SCLPVLHEQS GPDMPWGRGS 351 400 BACU009059/1-280 DATVSSTKNR MSGVCPATHG YQEASLCCGN G------ bmy_16802T0/1-353 KKPLMHRVRA VHRPLPPLPQ TQKSHSCQDG GRPDDHN ENSBTAP00000054078/1-260 ---------- ---------- ---------- ------- ENSTTRP00000008789/1-318 NTPGGASGRR LAQPKETPDA PGQSCPQATP TPPSDPE