KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:24 2014 Check: 00 .. Name: ENSP00000383505/1-777 Len: 813 Check: 4893 Weight: 1.00 Name: ENSBTAP00000054087/1-796 Len: 813 Check: 5628 Weight: 1.00 Name: bmy_13312T0/1-796 Len: 813 Check: 8358 Weight: 1.00 Name: BACU005704/1-788 Len: 813 Check: 2280 Weight: 1.00 Name: ENSTTRP00000011044/1-777 Len: 813 Check: 2430 Weight: 1.00 // 1 50 ENSP00000383505/1-777 ---------- ------MFPR --GAEAQDWH LDMQLTGKVV LSAAALLLVT ENSBTAP00000054087/1-796 ---------- ------MLPR GGGAEAQDWH LDMQLTGQLV LSAAALLLLT bmy_13312T0/1-796 ---------- ------MLPK GGGAEAQGWH LDMQVTGTVV LSAAALLLVT BACU005704/1-788 MHSSDQEMIL EGRLGDMLPE GGGAEAQGWH LDMQLTGKVV LSAAALLLVT ENSTTRP00000011044/1-777 ---------- ------MLPT GEGAEAQGCH LDMQLAGKVV LSAAALLLAT 51 100 ENSP00000383505/1-777 VAYRLYKSRP APAQRWGGNG QAEAKEEAEG SGQPAVQEAS PGVLLRGPRR ENSBTAP00000054087/1-796 AAYKLYKSRP AQALPRGADA KAEAEAEAGG SGQPAAQEAV PGAPWWDLRR bmy_13312T0/1-796 AAYRLYKSRP AQAPLGGGNA KAEAKEEAEG SRQPAIQEAV SGAPQWGLRR BACU005704/1-788 AAYRLYKSRT AQAPLGGGNA KAEAKEDAEG SRQPAIQEAV SGAPQWGLRR ENSTTRP00000011044/1-777 AAYRLYKPRP AQAPLGGGNA KAEAKDEAEG SRQPAIQEAV SGAPQWGLRR 101 150 ENSP00000383505/1-777 RRSSKRAEAP QGCSCENPRG PYVLVTGATS TD------RK PQRKGSGEER ENSBTAP00000054087/1-796 RRGSKGTTGP PGCSWERTEA SRVPATGASS ATSEAGEAGK AGRKHAGEEH bmy_13312T0/1-796 RRGSKGAGVS LGCSWENPEG SGVLATGASP ADSEARETGK PERKRAGEEQ BACU005704/1-788 RRGSKGAGVS LGCSWGNPEG SGVLATGASP ADSEARETGK PERKRAGEEQ ENSTTRP00000011044/1-777 RRGSKGAGVS LGCSWENPEG PGVLATGAPP AD------GK PERKCAGEEQ 151 200 ENSP00000383505/1-777 GGQGSDSEQV PPCCPSQETR TAVGSNPDPP HFPRLGSEPK SSPAGLIAAA ENSBTAP00000054087/1-796 AGQCPDSDLP APRCGDQEAG TAVDGKPELP HRPHQCSEPP SPPAGL-PAM bmy_13312T0/1-796 GGQCPDSGLA TPRYSGREAG TAVGGKPELP CRPHWCSEPQ SSLTGL-AAA BACU005704/1-788 GGQCPDSGLA TPRCSGREAG TAAGGKPELP RRLHWCSEPQ SSLAGL-AAA ENSTTRP00000011044/1-777 GGQCTDSGLA PPRGSGQEAG TAAGGK--LP CRAHWCSEPQ SSLTGL-AAA 201 250 ENSP00000383505/1-777 DGSCAGGEPS PWQDSKPREH PGLGQLEPPH CHYVAPLQGS SDMNQSWVFT ENSBTAP00000054087/1-796 ESGRVGGELT PRQDSGPPKH PGSGEQESPH EGEVAHREGQ CDMNNSWVFT bmy_13312T0/1-796 DGSGVSGELA PWWDSRSQEQ LGAGEQESPN RCWAAHTEGK SDMKKSWVFT BACU005704/1-788 DGSGVSGELA PWRDSRSQEQ LGAGEQESPD RCWAAHTEGK SDMNKSWVFT ENSTTRP00000011044/1-777 DGSGVSGELA PWRDSRSQEH LGAGEQESSD RCGAAHTEGK SDMNKSWVFT 251 300 ENSP00000383505/1-777 RVIGVSREEA GALEAASDVD LTLHQQEGAP NSSYTFSSIA RVRMEEHFI- ENSBTAP00000054087/1-796 HASGVHREEA AALQAASDLG LALRQREGAS DASYTFSSMA RVRVEENFIP bmy_13312T0/1-796 RVTGVHREEA GALWAALDMG LALRQQEGAT DASYTFLSVA RVRVEENFIP BACU005704/1-788 RVTGVHREEA GALRAASDMG LALRQQVRAT DASYTFLSVA RIRVEENFIP ENSTTRP00000011044/1-777 CVTGVHREEA GALRAASDMG LALRQQEGAT EASYTFLSVA RVRVEENFIP 301 350 ENSP00000383505/1-777 QKAEGVEPRL KGKVYDYYVE STSQAIFQGR LAPRTAALTE VPSPRPPPGS ENSBTAP00000054087/1-796 EKVEGIRPRL KGKVYDYHVE YTSQATSRSR LAPGTAASAG APAPESVSGP bmy_13312T0/1-796 EKMEGIRPRL KGKVYDYCVE STSQATSRGR LAPRTAALAE APPPVSVQGP BACU005704/1-788 EKMEGIRPRL KGKVYDYCVE STSQATSRGR LAPRTAALAE APPPVSVPGP ENSTTRP00000011044/1-777 EKMEGARPRL KRKVYDYCVE STRQATSRDR LAPRTAALAE APPPVSGPGP 351 400 ENSP00000383505/1-777 LGTGAASGGQ AGDTKGAAER AASPQTGPWP STRGFSRKES LLQIAENPEL ENSBTAP00000054087/1-796 LGTRIASGRP AGDGEGRQET AASPGSDPSG STRGFSRKES LLQILENPEF bmy_13312T0/1-796 LGMGPASGGQ ADDRVGGVET AASPQPVLSP STQGFSRKES LLQIVENPEL BACU005704/1-788 LGMGPASGGQ ADD------- ---------- -------RES LLQIVENPEL ENSTTRP00000011044/1-777 LGVGAASGGQ ADDTVGGVGT TAPPEPVLSP SAQGFSRKQS LLQIVENPEL 401 450 ENSP00000383505/1-777 QLQPDGFRLP APPCPDPGAL P--------- --GLGRSSRE PHVQPVAGTN ENSBTAP00000054087/1-796 QLQLDSFGDA APSCPDQRAA PTRPTSQDSP ESSSAGSRGK PHVHSVAGTS bmy_13312T0/1-796 QLQLDGFGDP APSCPDQSAL PTSPISRGSL GSSSAGSSGK PHLHFVAGAN BACU005704/1-788 QLQLDGFGDP APSCPDQSAL PTSPISQGSL GSSSAGSSGK PHLHFVAGAN ENSTTRP00000011044/1-777 QLQLEGFGDP APSCPDQSAL P--------- --GSAGSSGK PHLHSVAGAN 451 500 ENSP00000383505/1-777 FFHIPLTPAS APQVRLDLGN CYEVLTLAKR QNLEALKEAA YKVMSENYLQ ENSBTAP00000054087/1-796 FFHPPLSPGS ALEVHLDLGN CYQALAFAKR KKLEPLKEAA YKVMRDNYLQ bmy_13312T0/1-796 FFHLPLTPGS APDVHLDLGN CYEVLAFAKK QSLEALKEAA YKVMSDNYLQ BACU005704/1-788 FFHLPLTPGS APDVHLDLGN CYEVLAFAKK QSLETLKEAA YKVMSDNYLQ ENSTTRP00000011044/1-777 FFHLPLSPGS APGAHLDLGN CYEVLAFAKK QSLEALKEAA YKVMSDNYLQ 501 550 ENSP00000383505/1-777 VLRSPDIYGC LSGAERELIL QRRLRGRQYL VVADVCPKED SGGLCCYDDE ENSBTAP00000054087/1-796 VLRSPDIYGR LSGAERELVL QRRLRGREHL VVADVCPQDG SGRLCCYDDE bmy_13312T0/1-796 VLRSPDIYGC LSGAERELIL QRRLRGRQHL VVADMCLQED SSRLCCYDDE BACU005704/1-788 VLRSPDIYGC LSGAERELIL QRRLRGRKHL VVADMCPQED SSRLCCYDDE ENSTTRP00000011044/1-777 VLRSPDIYGC LSGAERELIL QRRLRGRKHL VVADMCPQED SSRLCCYDDE 551 600 ENSP00000383505/1-777 QDVWRPLARM PPEAVSRGCA ICSLFNYLFV VSGCQGPGHQ PSSRVFCYNP ENSBTAP00000054087/1-796 RDAWRPLARL PPEAVSRGCA ICSLFNYLFL VSGCQGSGLQ PSNRVFCYNP bmy_13312T0/1-796 RDVWHPLARL PPEAVSRGCA VCSLFNYLFI VSGCQGFGHQ PSNRVFCYNP BACU005704/1-788 RDVWHPLARL PPEAVSRGCA VCSLFNYLFI VSGCQGFGHQ PSNRVFCYNP ENSTTRP00000011044/1-777 RDVWHPLARL PPEAVSRGCA VCSLFNYLFI VSGCQGFGHQ PSNRVFCYNP 601 650 ENSP00000383505/1-777 LTGIWSEVCP LNQARPHCRL VALDGHLYAI GGECLNSVER YDPRLDRWDF ENSBTAP00000054087/1-796 LTDIWSEVCP LNQARPHCRL VALDGQLYAV GGECLNTVER YDPRLDRWTF bmy_13312T0/1-796 LTGIWSEVCP LNQARPHCRL VALDGHLYAI GGECLNTVEC YDPRLDRWTF BACU005704/1-788 LTGIWSEVCP LNQARPHCRL VALDGHLYAI GSESLNTVEC YDPRLDRWTF ENSTTRP00000011044/1-777 LTGIWSEVCP LNQARPHCQL VALDGHLYAI GGECLNTVEC YDPRLDRWTF 651 700 ENSP00000383505/1-777 APPLPSDTFA LAHTATVRAK EIFVTGGSLR FLLFRFSAQE QRWWAGPTGG ENSBTAP00000054087/1-796 APPLPKDTFA LAHTAAASGG ELFVTGGSLR YLLLRFSVRE QRWRAAPTGG bmy_13312T0/1-796 SPPLPNDTFA LAHTATACAG DIFVTGGSLR YLLLRFSAQE QRWQAGPTGG BACU005704/1-788 SPPLPNDTFA LAHTATACAG EIFVTGGSLR YLLLRFSAQE RRWRAGPTGG ENSTTRP00000011044/1-777 SPPLPSDTFA LAHTAAACAG EIFVTGGSLR YLLLRFSTQE QRWRAGPTGG 701 750 ENSP00000383505/1-777 SKDRTAEMVA VNGFLYRFDL NRSLGIAVYR CSASTRLWYE CATYRTPYPD ENSBTAP00000054087/1-796 GRDRTAEMVA VRGFLYRFDL NRSLGISVYR CSASARLWYE CATYRTPYPE bmy_13312T0/1-796 GKDRTAEMVA VKGFLYRFDL NRSLGISVYR CSASARLWYE CATYRTPYPD BACU005704/1-788 GKDRTAEMVA VKGFLYRFDL NRSLGISVYR CSASARLWYE CATYRTPYPD ENSTTRP00000011044/1-777 GKDRTAQMVA VKGFLYRFDL NRSLGISVYR CSASTRLWYE CATYRTPYPD 751 800 ENSP00000383505/1-777 AFQCAVVDNL IYCVGRRSTL CFLADSVSPR FVPKELRSFP APQGTLLPTV ENSBTAP00000054087/1-796 AFQCAVVDEL VYCVGRRRTL RFLADSISPR FVPEMRQAFP SPQGTLLPTV bmy_13312T0/1-796 TFQCAVVDDL IYCVGHQRTL RFLADYVSPR FVPEELQSFP SPQGTLLPTV BACU005704/1-788 TFQCAVVDDL IYCVGRQRTL RFLADYVSPR FVPEELQSFP SPQGTLLPTV ENSTTRP00000011044/1-777 TFQCAVVDDL IYCVGRQRTL CFLADYVSPR FVPEELQSFP SPQGTLLPTV 801 850 ENSP00000383505/1-777 LTLPTPDLPQ TRV ENSBTAP00000054087/1-796 LTLPGPDVPQ TRV bmy_13312T0/1-796 LTLPGPDVPQ TRV BACU005704/1-788 LTLPGPNVPQ TRV ENSTTRP00000011044/1-777 LTLPGPDVPQ TRV