KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:23:25 2014  Check: 00 ..

 Name: ENSTTRP00000012177/1-86  Len:    104  Check:  2403  Weight:  1.00
 Name: bmy_16149T0/1-104        Len:    104  Check:  9116  Weight:  1.00
 Name: ENSP00000429517/1-86     Len:    104  Check:  8631  Weight:  1.00
 Name: ENSBTAP00000054092/1-86  Len:    104  Check:  8786  Weight:  1.00

//


                         1                                                   50
ENSTTRP00000012177/1-86  --MGRKDAST IKLPVD--QY RKQI------ --------XX XXXXXXXXXX 
bmy_16149T0/1-104        MSHAIKSLDT DKLLSDLLQC EEDVEIKVSS CIILIDYRGK QDYKKNKPIL 
ENSP00000429517/1-86     --MGRKDAAT IKLPVD--QY RKQI------ --------GK QDYKKTKPIL 
ENSBTAP00000054092/1-86  --MGRKDAST IKLPVD--QY RKQI------ --------GK QDYKKTKPIL 


                         51                                                 100
ENSTTRP00000012177/1-86  XXXXXXXXXX XXXXXXXEVG LLLAAILALL LAFYAFFYLR LSTDVDPDLE 
bmy_16149T0/1-104        RATKLKAEAK KTAIGIKEVG LLLAAILALL LAFYAFFYLR LSTDVNPDLE 
ENSP00000429517/1-86     RATKLKAEAK KTAIGIKEVG LVLAAILALL LAFYAFFYLR LTTDVDPDLD 
ENSBTAP00000054092/1-86  RATKLKAEAK KTAIGIKEVG LVLAAILALL LAFYAFFYLR LSTDVDPDLE 


                         101                                                150
ENSTTRP00000012177/1-86  PDED 
bmy_16149T0/1-104        PDED 
ENSP00000429517/1-86     QDED 
ENSBTAP00000054092/1-86  PDEE