KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:25 2014 Check: 00 .. Name: ENSTTRP00000002212/1-639 Len: 639 Check: 1931 Weight: 1.00 Name: ENSBTAP00000054093/1-371 Len: 639 Check: 462 Weight: 1.00 Name: bmy_03045T0/1-449 Len: 639 Check: 1030 Weight: 1.00 Name: BACU004658/1-410 Len: 639 Check: 3149 Weight: 1.00 // 1 50 ENSTTRP00000002212/1-639 MPQLNGGGGD DLGANDELIS FKDEGEQEEK SSENSSAERD LADVKSSLVN ENSBTAP00000054093/1-371 ---------- ---------- ------SLSP TCRNLHFQSG STHYSAYKTI bmy_03045T0/1-449 ---------- ---------- ---------- ---------- ---------- BACU004658/1-410 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000002212/1-639 ESETNQNSSS DSEGERRPPP RSSFRDKSRE SLDQXXXXXX XXXXXXXXXX ENSBTAP00000054093/1-371 EHQIAIQKCA FSPGIPWPPS PSPCQSLATF CPDL------ ---------- bmy_03045T0/1-449 ---------- ---------- ---------- ---------- ---------- BACU004658/1-410 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000002212/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXYLQM KWPLLDVQAG TLQSRQALKD ENSBTAP00000054093/1-371 ---------- ---------- ----PVYLQM KWPLLDVQAG TLQSRQALKD bmy_03045T0/1-449 ---------- ---------- ---------- ---------- ---MKKLEAP BACU004658/1-410 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000002212/1-639 ARSPSPAHIV QCPLPCCTQG HDCQHFYPPS DFTVSTQVFR DMKRSHSLQK ENSBTAP00000054093/1-371 ARSPSPAHIV ---------- ---------- ---------- ---------- bmy_03045T0/1-449 FKMPSPQLTV ---------- ---------- ---------- ---------- BACU004658/1-410 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000002212/1-639 VGEPWCLESN KVPVVQHPHH VHPLTPLITY SNEHFTPGNP PPHLPADVDP ENSBTAP00000054093/1-371 --------SN KVPVVQHPHH VHPLTPLITY SNEHFTPGNP PPHLPADVDP bmy_03045T0/1-449 ---RLFPNSN KVPVVQHPHH VHPLTPLITY SNEHFTPGNP PPHLPADVDP BACU004658/1-410 --------SN KVPVVQHPHH VHPLTPLITY SNEHFTPGNP PPHLPADVDP 251 300 ENSTTRP00000002212/1-639 KTGIPRPPHP PDISPYYPLS PGAVGQIPHP LGWLVPQQGQ PVYPITTGGF ENSBTAP00000054093/1-371 KTGIPRPPHP PDISPYYPLS PGTVGQIPHP LGW----QGQ PVYPITTGGF bmy_03045T0/1-449 KTGIPRPPHP PDISPYYPLS PGTVGQIPHP LGW----QGQ PVYPITTGGF BACU004658/1-410 KTGIPRPPHP PDISPYYPLS PGTVGQIPHP LGW----QGQ PVYPITTGGF 301 350 ENSTTRP00000002212/1-639 RHPYPTALTV NASMSRFPPH MVPPHHTLHT TGIPHPAIVT PTVKQESSQS ENSBTAP00000054093/1-371 RHPYPTALTV NASMSRFPPH MVPPHHTLHT TGIPHPAIVT PTVKQESSQS bmy_03045T0/1-449 RHPYPTALTV NASMSRFPPH MVPPHHTLHT TGIPHPAIVT PTVKQESSQS BACU004658/1-410 RHPYPTALTV NASMSRFPPH MVPPHHTLHT TGIPHPAIVT PTVKQESSQS 351 400 ENSTTRP00000002212/1-639 DVGSLHSAKH QDSKKEEEKK KPHIKKPLNA FMLYMXXXXX XXXXXXXXXX ENSBTAP00000054093/1-371 EVGSLHSAKH QDSKKEEEKK KPHIKKPLNA FMLYMKEMRA KVVAECTLKE bmy_03045T0/1-449 DVGSLHSAKH QDSKKEEEKK KPHIKKPLNA FMLYMKEMRA KVVAECTLKE BACU004658/1-410 DVGSLHSAKH QDSKKEEEKK KPHIKKPLNA FMLYMKEMRA KVVAECTLKE 401 450 ENSTTRP00000002212/1-639 XXXXXXXXXX XXXXXXXXXQ AKYYELARKE RQLHMQLYPG WSARDNYGKK ENSBTAP00000054093/1-371 SAAINQILGR RWHALSREEQ AKYYELARKE RQLHMQLYPG WSARDNYGKK bmy_03045T0/1-449 SAAINQILGR RWHALSREEQ AKYYELARKE RQLHMQLYPG WSARDNYGKK BACU004658/1-410 SAAINQILGR RWHALSREEQ AKYYELARKE RQLHMQLYPG WSARDNYGKK 451 500 ENSTTRP00000002212/1-639 KKRKRDKQPG ETNEHSECFL NPCLSLPPIT XXXXXXXXXA RFGLDQQNNW ENSBTAP00000054093/1-371 KKRKRDKQPG ETN------- ---------- ---------- ---------- bmy_03045T0/1-449 KKRKRDKQPG ETNEHSECFL NPCLSLPPIT DLSAPKKCRA RFGLDQQNNW BACU004658/1-410 KKRKRDKQPG ETN------- ---------- DLSAPKKCRA RFGLDQQNNW 501 550 ENSTTRP00000002212/1-639 CGPCRRKKKC VRYIQGEGSC LSPPSSDGSL LDSPPSSPNL LGSPPQDAKS ENSBTAP00000054093/1-371 ---------- -----GE--- ---------- ---------- ---------- bmy_03045T0/1-449 CGPCRRKKKC VRYIQGEGSC LSPPSSDGSL LDSPPSSPNL LGSPPQDAKS BACU004658/1-410 CGPCRRKKKC VRYIQGEGSC LSPPSSDGSL LDSPPSSPNL LGSPPQDAKS 551 600 ENSTTRP00000002212/1-639 QTEQTQPLSL SLKPDPLAHL PMMPPPPALL LAEAAHGKAP ALCANGALDL ENSBTAP00000054093/1-371 ---------- ---------- ---------- ---------- ---------- bmy_03045T0/1-449 QTEQTQPLSL SLKPDPLAHL PMMPPPPALL LAEAAHGKAP ALCANGALDL BACU004658/1-410 QTEQTQPLSL SLKPDPLAHL PMMPPPPALL LAEAAHGKAP ALCANGALDL 601 650 ENSTTRP00000002212/1-639 PPAIPPSSLA QPSTSSLHSH GSLAGTQPQP LSLVTKSLE ENSBTAP00000054093/1-371 ---------- --KKSAFATY KVKAAASVHP LQMEAY--- bmy_03045T0/1-449 PPAIPPSSLA QPSTSSLHSH GSLAGTQPQP LSLVTKSLE BACU004658/1-410 PPAIPPSSLA QPSTSSLHSH GSLAGTQPQP LSLVTKSLE