KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:26 2014 Check: 00 .. Name: ENSP00000439268/1-504 Len: 513 Check: 1786 Weight: 1.00 Name: ENSBTAP00000054101/1-512 Len: 513 Check: 5980 Weight: 1.00 Name: ENSTTRP00000002581/1-509 Len: 513 Check: 3680 Weight: 1.00 Name: bmy_06015T0/1-508 Len: 513 Check: 637 Weight: 1.00 Name: BACU002392/1-508 Len: 513 Check: 2853 Weight: 1.00 // 1 50 ENSP00000439268/1-504 MTWLVLLGTL LCMLRVGL-G TPDSEGFPPR ALHNCPYKCI CAADLLSCTG ENSBTAP00000054101/1-512 MARLVLQSTL LCLLRVGL-G TQDSDSFLPH APHNCPHKCV CAADLLDCAG ENSTTRP00000002581/1-509 MARLVLQGTL LCMLRVGLMS TLDSEGFLSP APHNCPYKCV CAADLLSCAG bmy_06015T0/1-508 MARLVLQGTL LCMLRVGL-S TLDSEGFLSP APHNCPYKCV CAADLLSCAG BACU002392/1-508 MARLVLQGTL LCMLRVGL-S TLDSESFLSP APHNCPYKCV CAADLLSCAG 51 100 ENSP00000439268/1-504 LGLQDVPAEL PAATADLDLS HNALQRLRPG WLAPLFQLRA LHLDHNELDA ENSBTAP00000054101/1-512 LGLREVPVTL PAAAADLDLS HNGLQRLPPG WLAPLSRLRA LHLNHNELEA ENSTTRP00000002581/1-509 LGLQDVPGAL PAAAADLDLS HNALQRLRPG WLAPLSRLRA LRLNHNELDT bmy_06015T0/1-508 LGLQDVPVAL PAAAADLDLS HNALQRLRPG WLAPLSRLRT LRLNHNELDA BACU002392/1-508 LGLQDVPVTL PAAAADLDLS HNALQRLRPG WLATLSRLRT LRLNHNELDA 101 150 ENSP00000439268/1-504 LGRGVFVNAS GLRLLDLSSN TLRALGRHDL DGLGALEKLL LFNNRLVHLD ENSBTAP00000054101/1-512 LGRGVFTNAS GLRLLDLSSN ALRALGRHDL DGLGALETLL LFNNHLAHLD ENSTTRP00000002581/1-509 LGPGVFTNAS GLRLLDLSSN ALRALGRHDL DGLGELKMLL LFNNRLAHLD bmy_06015T0/1-508 LGRGVFTNAS GLRLLDLSSN ALRALGRHDL DGLGELKMLL LFNNRLAHLD BACU002392/1-508 LGRGVFTNAS GLRLLDLSSN ALRALGRHDL DGLGELKMLL LFNNRLAHLD 151 200 ENSP00000439268/1-504 EHAFHGLRAL SHLYLGCNEL ASFSFDHLHG LSATHLLTLD LSSNRLGHIS ENSBTAP00000054101/1-512 ERAFHRLGTL SRLYLGCNKL SSFSFNHLHG LGAAHLRILD LSSNHIGRTP ENSTTRP00000002581/1-509 EQAFHGLGAL SRLYLGCNEL ASFSFNHLHG LGTTHLRTLD LSSNHLGRIP bmy_06015T0/1-508 EQAFHGLGAL SRLYLGCNEL ASFSFNHLHG LGTTHLRTLD LSSNHLGRIP BACU002392/1-508 EQAFHGLGVL SRLYLGCNEL ASFSFSHLHG LGTTHLRTLD LSSNHLGRIP 201 250 ENSP00000439268/1-504 VPELAALPAF LKNGLYLHNN PLPCDCRLYH LLQRWHQRGL SAVRDFAREY ENSBTAP00000054101/1-512 VPDLAALPAF LKNGLYLHDN PLPCDCRLYH LLRRWHQRGL SAVSDFAREY ENSTTRP00000002581/1-509 VPDLASLPAF LKNGLYLHNN PLPCDCRLYH LLQRWHQRGL SAVSDFAGEY bmy_06015T0/1-508 VPDLASLPAF LKNGLYLHNN PLPCDCRLYH LLQRWHQRGL SAVSDFAGEY BACU002392/1-508 VPDLASLPAF LKNGLYLHNN PLPCDCRLYH LLRRWHQRGL SAVSDFAGEY 251 300 ENSP00000439268/1-504 VCLAFKVPAS RVRFFQHSRV FENCSSAPAL GLERPEEHLY ALVGRSLRLY ENSBTAP00000054101/1-512 TCLAFKVPDS RVRFFAHSRV FENCSVALAQ DLERPEEQLH VQVGQSLRLH ENSTTRP00000002581/1-509 TCLAFKVPTS RVRFFEHSRV FENCSAALAR GLEQPEEQLH VQVGQSLRLH bmy_06015T0/1-508 TCLAFKVPTS RVRFFEHSRV FENCSAALAR GLEQPEEQLH VQVGQSLRLH BACU002392/1-508 TCLAFKVPTS RVRFFEHSRV FENCSAALAR GLEQPEEQLH VQVGQSLRLH 301 350 ENSP00000439268/1-504 CNTSVPAMRI AWVSPQQELL RAPGSRDGSI AVLADGSLAI GNVQEQHAGL ENSBTAP00000054101/1-512 CNTSAPALRV AWVSPQHELL VAPGSRNGSI AVLADGSLAI GSVQPWHEGV ENSTTRP00000002581/1-509 CNTSAPAVHI AWVSPQHELL VAPGSRNGSI AVRADGSLAI SNVQPWHEGV bmy_06015T0/1-508 CNTSAPAVHI AWVSPQHELL MAPGSRNGSI AVRADGSLAI SNVQPWHEGV BACU002392/1-508 CNTSAPAVHI AWVSPQHELL MAPGSRNGSI AVRADGSLAI SNVQPWHEGV 351 400 ENSP00000439268/1-504 FVCLATGPRL HHNQTHEYNV SVHFPRPEPE AFNTGFTTLL GCAVGLVLVL ENSBTAP00000054101/1-512 FVCLATGPRL HHNQTHEYNV SVSFPHPEPD AFNTGFTTLL GCAVGLTLVL ENSTTRP00000002581/1-509 FVCLATGPHL HHNQTHEYNV SVHFPHPEPD TFNTGFTTLL GCAVGLVLVL bmy_06015T0/1-508 FVCLATGPHL HHNQTHEYNV SVHFPHPEPD TFNTGFTTLL GCAVGLVLVL BACU002392/1-508 FVCLATGPHL HHNQTHEYNV SVHFPRPEPD TFNTGFTTLL GCAVGLVLVL 401 450 ENSP00000439268/1-504 LYLFAPPC-- --RCCRRAC- ---RCRRWPQ TPSPLQELSA QSSVLSTTPP ENSBTAP00000054101/1-512 LYLFAPPCPG CRRCCRRTCH CCRRCRRWPQ TPSPLRELSA QSSVLSTTPP ENSTTRP00000002581/1-509 LYLFTPPCPG CRSCYHHTC- ---RCRRWPR TPSPLQELSA QSSVLSTTPP bmy_06015T0/1-508 LYLFVPPCPG CRRCYHRTC- ---CCRRWPR TPSPLQELSA QSSVLSTTLP BACU002392/1-508 LYLFVPPCPG CRRCYHCTC- ---RCRRWPR TPSPLQELSA QSSVLSTTLP 451 500 ENSP00000439268/1-504 DAPSRKASVH KHVVFLEPGR RGLNGRVQLA VAEEFDLYNP GGLQLKAGSE ENSBTAP00000054101/1-512 DAPSRKASVH KHVVFLEPGR RGLNGRVQLA VAEDFDLYNP SGLRLKAGSE ENSTTRP00000002581/1-509 DAPRRKASVH KHVVFLEPGR RSLNGRVQLA VAEDFDLHNP LGLRLKAGSE bmy_06015T0/1-508 DAPRRKASVH KHVVFLEPGR RSLNGRVQLA VAENFDLYNP MGLRLKAGSE BACU002392/1-508 NAPRRKASVH KHVVFLEPGR RSLNGRVQLA VAENFDLYNP MGLRLKAGSE 501 550 ENSP00000439268/1-504 SASSIGSEGP MTT ENSBTAP00000054101/1-512 STSPTASEGL VMT ENSTTRP00000002581/1-509 STSSTGSEGL VMT bmy_06015T0/1-508 SASSTGSEGL VMT BACU002392/1-508 SASSTGSEGL VMT