KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:32 2014 Check: 00 .. Name: ENSP00000386141/1-373 Len: 397 Check: 9123 Weight: 1.00 Name: ENSBTAP00000054112/1-367 Len: 397 Check: 946 Weight: 1.00 Name: bmy_06864T0/1-292 Len: 397 Check: 6470 Weight: 1.00 Name: BACU020588/1-373 Len: 397 Check: 2584 Weight: 1.00 Name: ENSTTRP00000016548/1-372 Len: 397 Check: 9436 Weight: 1.00 // 1 50 ENSP00000386141/1-373 MKYTKQNFMM SVLGIIIYVT DLIVDIWVSV RFFHEGQYVF SALALSFMLF ENSBTAP00000054112/1-367 MKYTKFNFMM SVLGIMIYVT DLIVDIWVSV RFFHERQYVF GVLTVSFMLF bmy_06864T0/1-292 MKNTTEAT-- ---------- ---------- ---------- ------FLYL BACU020588/1-373 MKYTKLNFMM SVLGIVIYVI DLIVDIWVSV RFFHEGQYVF GILTVSFMLF ENSTTRP00000016548/1-372 MKYTKLNFMM SVLGIIIYVT DLIVDIWVSV RFFYEGQYVF GILTVSFMLF 51 100 ENSP00000386141/1-373 GTLVAQCFSY SWFKADLKKA GQESQHCFLL LHCLQGGVFT RYWFALKRGY ENSBTAP00000054112/1-367 GTLVVQCFSY SWFKADLKEA GQESHHCFLL LHCLQGGVFT RYWFALKQGY bmy_06864T0/1-292 GSQM------ ---------- ---------- ---------- -YWFALKKGY BACU020588/1-373 GTLVVQCFSY SWFKNDLKES GQESQHCFLL LHCLQGGVFT RYWFALKKGY ENSTTRP00000016548/1-372 GTLVVQCFSY SWFKDDLKES GQESQHCFLL LHCLQGGVFT RYWFALKR-Y 101 150 ENSP00000386141/1-373 HAAFKYDSNT SNFVEEQIDL HKEVIDRVTD LSMLRLFETY LEGCPQLILQ ENSBTAP00000054112/1-367 QVAFKYSSKT ENFVEKQIN- -----DRVTD LSMLRLFETY LEGCPQLALQ bmy_06864T0/1-292 HVAFKYTSKT DNFVEEQIDP HKEVIDRVTD LSMLRLFETY LEGCPQLALQ BACU020588/1-373 HVAFKYTSKT DNFVEEQIDP HKEVIDRVTD LSMLRLFETY LEGCPQLALQ ENSTTRP00000016548/1-372 HVAFKYTSKT DNFVEEQIDP HKEVIDRVTD LSMLRLFETY LEGCPQLALQ 151 200 ENSP00000386141/1-373 LYILLEHGQA NFSQYAAIMV SCCAISWSTV DYQVALRKSL PDKKLLNGLC ENSBTAP00000054112/1-367 LYIFLEHGQA NFTQYAAIMV SCCAVSWSTV DYQIALRKSL PDKNLLNGPC bmy_06864T0/1-292 LYILLEHD-- -----AAIMV SCCAISWSTV DYQVALRKSL PDKNLLNGPC BACU020588/1-373 LYILLEHGQE NFTQYAAIMV SCCAISWSTV DYQVALRKSL PDKNLLNGPC ENSTTRP00000016548/1-372 LYILLEHGQE NFTQYAAIMV SCCAISWSTV DYQVALRKSL PDKNLLNGPC 201 250 ENSP00000386141/1-373 PKITYLFYKL FTLLSWMLSV VLLLFLNVKI ALFLLLFLWL LGIIWAFKNN ENSBTAP00000054112/1-367 PKLVYLFYKL FTLLSWMLSV VLLLFLNVKI AFLLLFFLWI LGIYWAFKKQ bmy_06864T0/1-292 PKLVYLFYKL FTLLSWMLS- ---------- ---------- --ILWAFKEQ BACU020588/1-373 PKLVYLFYKL FTLLSWMLSV VLLLFLNVKI ALLLLLFLWF LGVLWAFKEQ ENSTTRP00000016548/1-372 PKLVYLFYKL FTLLSWMLSV VLLLFLNVKI ALFLLLFLWF LGILWAFKEQ 251 300 ENSP00000386141/1-373 TQFCTCISME FLYRIVVGFI LIFTFFNIKG QNTKCPMSCY YIVRVLGTLG ENSBTAP00000054112/1-367 TDFCVSTSME ILYRIVVGFI LTFTFFNIKG QNTKCPMSCY YIVRVLVTLG bmy_06864T0/1-292 TEFCASISME FIYRIVVGFI LVFTFFNIKG QNTKCPMSCY YIVRVLATLG BACU020588/1-373 TEFCASRSME FIYRIVVGFI LVFTFFNIKG QNTKCPMSCY YIVRVLATLG ENSTTRP00000016548/1-372 TDFCASIGME FIYRIVVGFI LVFTFFNIKG QNTKCPMSCY YIVRVLATLG 301 350 ENSP00000386141/1-373 ILTVFWVCPL TIFNPDYFIP ISITIVLTLL LGILFLIVYY GSFHPNRSAE ENSBTAP00000054112/1-367 ILIVFWFYPL SIFNADYFIP VSITIVLSLL LGIIFLLVYY GTLHPNRSEE bmy_06864T0/1-292 ILIVFWFYPL SIFNSDYFIP VSITIALTLL LGIIFLIVYY GTLHPNRSEE BACU020588/1-373 ILIVFWFYPL SIFNSDYFIP VSITIALTLL LGIIFLIVYY GTLHPNRSEE ENSTTRP00000016548/1-372 ILIVFWSYPL SIFNSDYFIP VSITIALTLL LGIIFLIVYY GTLHPNRSEE 351 400 ENSP00000386141/1-373 TKCDEIDGKP VLRECRMR-- ---------- ---------- YFLME-- ENSBTAP00000054112/1-367 TKLDEVDGKP IQRDCRMK-- ---------- ---------- HFLME-- bmy_06864T0/1-292 TKLDEVDGKP VQRDCRMKSG TAFQGVVLIT LSISLCSCWS FTSIEKI BACU020588/1-373 TKLDEVDGKP VQRDCRMK-- ---------- ---------- YFLME-- ENSTTRP00000016548/1-372 TKLDEADGKP VQRDCRMK-- ---------- ---------- YFLME--