KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:34 2014 Check: 00 .. Name: bmy_03182T0/1-503 Len: 620 Check: 1405 Weight: 1.00 Name: ENSBTAP00000054147/1-570 Len: 620 Check: 5463 Weight: 1.00 Name: BACU012694/1-501 Len: 620 Check: 4619 Weight: 1.00 Name: ENSTTRP00000012196/1-606 Len: 620 Check: 4084 Weight: 1.00 // 1 50 bmy_03182T0/1-503 MRRGENSQSN NCHYLIAVIS AILQGYGGGR QPVTDASAEL HRLCGCLEQL ENSBTAP00000054147/1-570 -MAKEGAVLK MTRDLKAAVS AILQGYGAGQ QPVTDTSAEL HRLCGCLELL BACU012694/1-501 -MAEEGAVFK MTSDLKAVIS AILQGYGRGR QPVTDASAEL HRLCGCLEQL ENSTTRP00000012196/1-606 -MAEEGAVFK MTSDLKAVIS AILQGYGGGQ QPVTDTSAEL HRLCGCLEQV 51 100 bmy_03182T0/1-503 LQFDQKEQKS FLRPRKDYWD FLCTALWRQR GDTEPVHFVH SQDKLKTPLG ENSBTAP00000054147/1-570 LQFDQKEQKS FLRPRKDYWD FLCAALWQQR GDTEPVRFVH SLDKLKTPLG BACU012694/1-501 LQFDQKEQKS FLRPRKDYWD FLCTALWQQR GDTEPVLFVH SQDKLKTPLG ENSTTRP00000012196/1-606 LQFDQKEQKS FLRPRKDYWD FLCTALWRQR GDMEPVRFVH SQDKLKTPLG 101 150 bmy_03182T0/1-503 KGRAFIRFCL AHGQLAESLQ LCLLNPELTR EWYGPQSPLV CPELQEDILD ENSBTAP00000054147/1-570 KGRAFIRFCL AHGQLAESLQ LCLLNPEFTR EWYGPRSPLV CPELREDILD BACU012694/1-501 KGRAFIRFCL AHGQLAESLQ LCLLNPELTR EWYGPRSPLV CPELQEDILD ENSTTRP00000012196/1-606 KGRAFIRFCL AHGQLAESLQ LCLLNPELTR EWYGPRSPLL CPELQEDILD 151 200 bmy_03182T0/1-503 SLYVLNEVTF DLDLQRPDLD GAWPMFSESR CSNSNWTQGR RPRKIKDSPK ENSBTAP00000054147/1-570 SLYALNGMTF DLDLQRPDLD GAWPMFSESH CSNSSRTRGR RPRKTRESPK BACU012694/1-501 SLYALNEVTF DLDLQQPDLD GAWPMFSESR CSNSNWTQGR RPRRIKDSPK ENSTTRP00000012196/1-606 SLYALNEVTF DLDLQRPDLD GAWPMFSESR CSNSNWTPGR RPRKIKDSPK 201 250 bmy_03182T0/1-503 E--------- ---------- ---------- ---------- --SLRHGLQK ENSBTAP00000054147/1-570 E--------- ---------- ISATYGNSTE VHLEEPHTSQ ASCLQDAPRK BACU012694/1-501 E--------- ---------- ISPTYGDPTG GHPEEPYTRQ ASSLQDAPRE ENSTTRP00000012196/1-606 EVPLPNLQPL PLLYLFGTPS ISPTYGDPTG GHPEEPHTRQ ASSLRDAPRE 251 300 bmy_03182T0/1-503 TK-------E QAQHQEQLLK EQEGELKALQ EQLSRCQEER ARLQAELEQK ENSBTAP00000054147/1-570 DGLAGLPRSQ QHRHHPHFLE KKKEDPRSLG CPPSMWELDG EEFQ---QDQ BACU012694/1-501 DRLAGLPRSQ QHKHQPLFLE KKKEDPRRLG PPQSMWELEG EELQ---QNQ ENSTTRP00000012196/1-606 DRLAGLPRSQ QHKHQPLFLE KKKEDPRRLG PPQSMWELEG EELQ---QNQ 301 350 bmy_03182T0/1-503 QREAERKGAV YEEELGGQRD LVRAMKRRVL ELIQPEIKFT SNMEGFNWEN ENSBTAP00000054147/1-570 EKGVPRTEIC LEDSTPTIQG QGEGARETLK EVVGSEAEGK GALLGVEGQR BACU012694/1-501 EKGAPRTGIC LENSTPSIQG QGKGAKGTLK EVIGTEAEGR GVLLSAEDQR ENSTTRP00000012196/1-606 EKGAPRTGMC LENSTPSMQG QGKGAKGTLK EVIGTDTEGR GVLLSAEGQR 351 400 bmy_03182T0/1-503 YSDEDFGNYS YNTDLPSILP DSAP-CQPES LDINKYA--V VIIYALVFLL ENSBTAP00000054147/1-570 TTKGTHEGEA ERSHIHRLLA SSPKGTIGDV VSWGKHDGKV PSIPGELWVL BACU012694/1-501 TIDGTYEGEA ERSHIHRLLA SSPKEMLGDA VSGSRQGGKV PSIPREFWVL ENSTTRP00000012196/1-606 TIDGTYEGEA ERSHTHRLLA SSPKEMIRDA MSGSRQGGKV PSSPREFWVL 401 450 bmy_03182T0/1-503 SLLGNSLVML VILYSRVGRS VTDVYLLNLA MADLLFALTL PIWATSKAKG ENSBTAP00000054147/1-570 QGLGTKED-- ----STSEKP QEQTGVTSVT RREEQAEMAL QDVVKSLRYG BACU012694/1-501 QGLETKEG-- ----STTEKP QEQIGVTTAT RREEQAEMAL QDVVKSLRHG ENSTTRP00000012196/1-606 QGLETKEG-- ----STTEKP QEQIGVTNAT RREEQAEMAL QDVVKSLRHG 451 500 bmy_03182T0/1-503 WIFGTPLCKV V-SLLKEVNF YSGILLLACI SVDRYLAIVH ATRTLTQKRH ENSBTAP00000054147/1-570 LQKTQEQAQH QEQMLKEQE- --GELKALQE QLSRAQRHRE -HRWQKGDEG BACU012694/1-501 LQKTKEQAQH QEQLLKEQE- --GELKALQE QLSRCQEERA ---------- ENSTTRP00000012196/1-606 LQKTKEQAQH QEQLLKEQE- --GELKALQE QLSXXXXXXX XXXXXXXXXX 501 550 bmy_03182T0/1-503 WVKFICLGIW VLSLILALPI FVHPIPDPSP ILDME--LLP KVNHLPNL-- ENSBTAP00000054147/1-570 QKPGKCTDKV IRKSSVQPAL YSCAVSAVSP LFLEKDILWQ KVQHLSSMAP BACU012694/1-501 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012196/1-606 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXEKDNLWQ KVQHLSSLAP 551 600 bmy_03182T0/1-503 ---------- DQMSNPYPI- ---------- ---------- ---------- ENSBTAP00000054147/1-570 GCCVVCSKIF GRLSRRYPCR LCGGLVCHAC SVDYKKRERH CPPCSQRRDA BACU012694/1-501 -------RLQ AELEQKQREA ERKGAVYEEE -LG-GQRDL- VRAMKRRVLE ENSTTRP00000012196/1-606 GCCVVCNKIF GRLSRRYLCS GRTNSKREDS GLS-GEPAIW SRPWRGGALG 601 650 bmy_03182T0/1-503 ---------- ---------- ENSBTAP00000054147/1-570 QVL------- ---------- BACU012694/1-501 LIQ------- ---------- ENSTTRP00000012196/1-606 PLLGKGRPPE TDPGHSAGRW