KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:40 2014 Check: 00 .. Name: bmy_10512T0/1-134 Len: 175 Check: 9480 Weight: 1.00 Name: ENSP00000294742/1-154 Len: 175 Check: 2224 Weight: 1.00 Name: ENSTTRP00000014017/1-154 Len: 175 Check: 2273 Weight: 1.00 Name: ENSBTAP00000054193/1-151 Len: 175 Check: 2218 Weight: 1.00 // 1 50 bmy_10512T0/1-134 MSKNTVSSAR FRKVDVDEYD ENKFVDEEDG GDGQVGPDEG EVDSCLRQYP ENSP00000294742/1-154 MSKNTVSSAR FRKVDVDEYD ENKFVDEEDG GDGQAGPDEG EVDSCLRH-- ENSTTRP00000014017/1-154 MSKNTVSSAR FRKVDVDEYD ENKFVDEEDG GDGQAGPDEG EVDSCLRH-- ENSBTAP00000054193/1-151 MSKNTVSSAR FRKVDVDEYD ENKFVDEEDG GDGQAGPDEG EVDSCLRQ-- 51 100 bmy_10512T0/1-134 SVGRPPHPTR PSPSSGPPLR AGRNMTAALQ AALKNPPINT KSQAV----- ENSP00000294742/1-154 ---------- ---------S ITGNMTAALQ AALKNPPINT KSQAVKDRAG ENSTTRP00000014017/1-154 ---------- ---------T ITGNMTAALQ AALKNPPINT KSQAVKDRAG ENSBTAP00000054193/1-151 ---------- ---------- --GNMTAALQ AALKNPPINT KSQAVKDRAG 101 150 bmy_10512T0/1-134 ---------- ------KAVQ SLDKNGVDLL MKYIYKGFES PSDNSSAMLL ENSP00000294742/1-154 SIVLKVLISF KANDIEKAVQ SLDKNGVDLL MKYIYKGFES PSDNSSAMLL ENSTTRP00000014017/1-154 SIVLKVLISF KANDIEKAVQ SLDKNGVDLL MKYIYKGFES PSDNSSAMLL ENSBTAP00000054193/1-151 SIVLKVLISF KANDIEKAVQ SLDKNGVDLL MKYIYKGFES PSDNSSAVLL 151 200 bmy_10512T0/1-134 QWHEK----- ---------- ----- ENSP00000294742/1-154 QWHEKALAAG GVGSIVRVLT ARKTV ENSTTRP00000014017/1-154 QWHEKALAAG GVGSIVRVLT ARKTV ENSBTAP00000054193/1-151 QWHEKALAAG GVGSIVRVLT ARKTV