KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:40 2014 Check: 00 .. Name: bmy_09322T0/1-296 Len: 587 Check: 7094 Weight: 1.00 Name: BACU004998/1-351 Len: 587 Check: 4868 Weight: 1.00 Name: ENSP00000355568/1-587 Len: 587 Check: 846 Weight: 1.00 Name: ENSTTRP00000004303/1-344 Len: 587 Check: 5375 Weight: 1.00 Name: ENSBTAP00000054195/1-465 Len: 587 Check: 717 Weight: 1.00 // 1 50 bmy_09322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU004998/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000355568/1-587 MAAAVAVAAA SRRQSCYLCD LPRMPWAMIW DFTEPVCRGC VNYEGADRVE ENSTTRP00000004303/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054195/1-465 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_09322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU004998/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000355568/1-587 FVIETARQLK RAHGCFPEGR SPPGAAASAA AKPPPLSAKD ILLQQQQQLG ENSTTRP00000004303/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054195/1-465 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_09322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU004998/1-351 ---------- ---------- -------MPG SEF------- ---------- ENSP00000355568/1-587 HGGPEAAPRA PQALERYPLA AAAERPPRLG SDFGSSRPAA SLAQPPTPQP ENSTTRP00000004303/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054195/1-465 ---------- ---------- --XERPPRLG SDFGGSRPAA ALAQPPTPQP 151 200 bmy_09322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU004998/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000355568/1-587 PPVNGILVPN GFSKLEEPPE LNRQSPNPRR GHAVPPTLVP LMNGSATPLP ENSTTRP00000004303/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054195/1-465 PPVNGILVPN GFSKLEEPPE LNRQSPNPRR GHAVPPTLVP LMNGSATPLP 201 250 bmy_09322T0/1-296 ---------- ---------- ---------- --------ML SSSGCSSNL- BACU004998/1-351 ---------- ---------- ---------- --------KK LQYGCNIVLL ENSP00000355568/1-587 TALGLGGRAA ASLAAVSGTA AASLGSAQPT DLGAHKRPAS VSSSAAVEHE ENSTTRP00000004303/1-344 ---------- ---------- ---------- ---------- ---GAAAEHE ENSBTAP00000054195/1-465 AALGLGGRAA ASLAAVSGAA AAGLGSAQPA EMGAHKRPAS VSSSAAAEHE 251 300 bmy_09322T0/1-296 ----VAALLV IFPSSE---- ---------- ---------- ---------- BACU004998/1-351 IETALRRMKA VIPHVDIG-- --LSSGAGAA ELGTEGAGKG RGPGDQDWVN ENSP00000355568/1-587 QREAAAKEKQ PPPPAHRGPA DSLSTAAGAA ELSAEGAGKS RGSGEQDWVN ENSTTRP00000004303/1-344 QREAAAKEKQ PPAGSHRGPA DSLSSGTGAA DLGTEGAGKG RGPGEQDWVN ENSBTAP00000054195/1-465 QREAAAKEKQ PPAASHRGPA DSLSTAAGAA ELGSEGAGKG RGPGEQDWVN 301 350 bmy_09322T0/1-296 ----FRIQFL ILKSPNWKG- ------NRSH ILCGKL---S LENPHEELGF BACU004998/1-351 RPKTVRDTLL ALHQHGHSGP FESKFKKEPA LTAGRLLGFE ANGANGSKAV ENSP00000355568/1-587 RPKTVRDTLL ALHQHGHSGP FESKFKKEPA LTAGRLLGFE ANGANGSKAV ENSTTRP00000004303/1-344 RPKTVRDTLL ALHQHGHSGP FESKFKKEPA LTAGRLLGFE ANGANGSKAV ENSBTAP00000054195/1-465 RPKTVRDTLL ALHQHGHSAP FESKFKKEPA LTAGRLLGFE ANGANGSKAV 351 400 bmy_09322T0/1-296 ARTARKRKPS PEPEGEVGPP KINGEAQPWL STSTEGLKIP ITPTSSFVSP BACU004998/1-351 ARTARKRKPS PEPEGEVGPP KINGEAQPWL STSTEGLKIP ITPTSSFVSP ENSP00000355568/1-587 ARTARKRKPS PEPEGEVGPP KINGEAQPWL STSTEGLKIP MTPTSSFVSP ENSTTRP00000004303/1-344 ARTARKRKPS PEPEGEVGPP KINGEAQPWL STSTEGLKIP ITPTSSFVSP ENSBTAP00000054195/1-465 ARTARKRKPS PEPEGEVGPP KINGEAQPWL STSTEGLKIP ITPTSSFVSP 401 450 bmy_09322T0/1-296 PPPTASPHSN RTTPPEAAQN GQSPMAALIL VADNAGGSHA SKDASQVHST BACU004998/1-351 PPPTASPHSN RTTPPEAAQN GQSPMAALIL VADNAGGSHA SKDASQVHST ENSP00000355568/1-587 PPPTASPHSN RTTPPEAAQN GQSPMAALIL VADNAGGSHA SKDANQVHST ENSTTRP00000004303/1-344 PPPTASPHSN RTTPPEAAQN GQSPMAALIL VADNAGGSHA SKDANQVHST ENSBTAP00000054195/1-465 PPPTASPHSN RTTPPEAAQN GQSPMAALIL VADNAGGSHA SKDANQVHST 451 500 bmy_09322T0/1-296 TRRNSGSPPS PSSVNQRRLG PREVGGQGAG STGGLEPVHP ASLPDSSLAA BACU004998/1-351 TRRNSGSPPS PSSVNQRRLG PREVGGQGAG STGGLEPVHP ASLPDSSLAA ENSP00000355568/1-587 TRRNSNSPPS PSSMNQRRLG PREVGGQGAG NTGGLEPVHP ASLPDSSLAT ENSTTRP00000004303/1-344 TRRNSCSPPS PSSMNQRRLG PREVGGQGAG STGGLEPVHP ASLPDSSLAA ENSBTAP00000054195/1-465 TRRNSSSPPS PSSMNQRRLG PREVGGQGAG SAGGLEPVHP ASLPDSSLAA 501 550 bmy_09322T0/1-296 SAPLCCTLCH ERLEDTHFVQ CPSVPSHKFC FPCSRQSIKQ QGASGEVYCP BACU004998/1-351 SAPLCCTLCH ERLEDTHFVQ CPSVPSHKFC FPCSRQSIKQ QGASGEVYCP ENSP00000355568/1-587 SAPLCCTLCH ERLEDTHFVQ CPSVPSHKFC FPCSRQSIKQ QGASGEVYCP ENSTTRP00000004303/1-344 SAPLCCTLCH ERLEDTHFVQ CPSVPSHKFC FPCSRQSIKQ QGASGEVYCP ENSBTAP00000054195/1-465 SAPLCCTLCH ERLEDTHFVQ CPSVPSHKFC FPCSRQSIKQ QGASGEVYCP 551 600 bmy_09322T0/1-296 SGEKCPLVGS NVPWAFMQGE IATILAGDVK VKKERDS BACU004998/1-351 SGEKCPLVGS NVPWAFMQGE IATILAGDVK VKKERDS ENSP00000355568/1-587 SGEKCPLVGS NVPWAFMQGE IATILAGDVK VKKERDS ENSTTRP00000004303/1-344 SGEKCPLVGS NVPWAFMQGE IATILAGDVK VKKERDS ENSBTAP00000054195/1-465 SGEKCPLVGS NVPWAFMQGE IATILAGDVK VKKERDS