KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:44 2014 Check: 00 .. Name: ENSP00000363433/1-458 Len: 458 Check: 4920 Weight: 1.00 Name: ENSBTAP00000054217/1-453 Len: 458 Check: 5811 Weight: 1.00 Name: ENSTTRP00000011902/1-448 Len: 458 Check: 987 Weight: 1.00 Name: bmy_16901T0/1-431 Len: 458 Check: 5448 Weight: 1.00 Name: BACU005450/1-368 Len: 458 Check: 2508 Weight: 1.00 // 1 50 ENSP00000363433/1-458 MSSSRPEPGP WAPLSPRLQP LSQSSSSLLG EGREQRPELR KTASSTVWQA ENSBTAP00000054217/1-453 MRSSRPEPDA PEPLSAHPQP LSRSSSSLLG EGRGQRPEYR KRASSTVCQA ENSTTRP00000011902/1-448 MRSSHPERGA QEPLSPCPQP LSWSSSSLLG AGRGQRPELH KSASSTVWQA bmy_16901T0/1-431 MRSSRPEPGA QEPLSPCPQP LSWSSSSL-- ---------- ---------- BACU005450/1-368 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000363433/1-458 QLGEASTRPQ APEEEGNPPE SMKPARASGP KARPSAGGHW WSSTVGNVST ENSBTAP00000054217/1-453 QLGEAGTGAQ VPEAEGQQAE RVEQAQASSP QLQPSAVGHW RSSTVGNVST ENSTTRP00000011902/1-448 QPGEASTGAQ VREEEGHQAE REEQARASSP RPQPGAVGHW QS------SA bmy_16901T0/1-431 -PGEASTGAQ VPEEEGRQAE REEQARASSP RPQPGAVGHW RSGTVGNVST BACU005450/1-368 ---------- ---------- ---------- ------MGHW RSGTVGNVST 101 150 ENSP00000363433/1-458 MGGSDLCRLR APSAAAMQRS HSDLVRSTQM RGHSGARKAS LSCSALGSSP ENSBTAP00000054217/1-453 VGGSDLCNPW DPSAAAVQRS HSDLAHSTQT RGHSGAQKAS LSCSALGSLP ENSTTRP00000011902/1-448 VGGGDLCCLR DPSTAAVQRS HSDLVCSSQI WGHSGARKAS LSCSALGSSP bmy_16901T0/1-431 VGGGDLCCLR DPSTAAVQRS HSDLVCSTQT WGHSSARKAS LSCSALGSSP BACU005450/1-368 VGGGHLCCLW DPSTAAVQRS HSDLVCSTQT WGHSSARKAS LSCSALGSSP 151 200 ENSP00000363433/1-458 VHRAQLQPGG TSGQGGQAPA GLERDLAPED ETSNSAWMLG ASQLSVPPLD ENSBTAP00000054217/1-453 VHGAQLQPSS TSGQSGQTPE GLERDLAPED KTSNSAWTL- ESQVWVPPAA ENSTTRP00000011902/1-448 VHGAQLQPSS ASGRGGQAPA GLERDLALED ETSNSAWTLE ESQVWVPPPD bmy_16901T0/1-431 VHRAQLQPSS TAGQGGQAPA GLERDLALED GTSNSAWTLE ESQVWVPPPG BACU005450/1-368 VHRAQLQPSS TSGQGGQAPA GLERDLALED GTSNSAWTLE ESQVWVPPPG 201 250 ENSP00000363433/1-458 LGDTTAHSSS AQAEPKAAEQ LATTTCHALP PAALLCGMRE VRAGGCCHAL ENSBTAP00000054217/1-453 LGGTVTHSSS ----PKATGQ SATTSCHALS PAALLCGMRE VGASSCCHGL ENSTTRP00000011902/1-448 LGGTVTHSSS ----LKATGQ SATTSCHALP PAALLCGVRE VGASSCCHGL bmy_16901T0/1-431 LGGTMTHSSS ----LKATGQ LATTSCHALP PAALLCGMRE VGASSCCHGL BACU005450/1-368 LGGTMTHSSS ----LKATGQ SATTSCYALP PAALLCGMRE VGASSCCHGL 251 300 ENSP00000363433/1-458 PATGILAFPK LVASVSESGL QAQHGVKIHC RLSGGLPGHS HCCAHLWGPA ENSBTAP00000054217/1-453 PAPGILAFPK LVASVSESRL QAHHGVKLQC RFSGGLPGHS HCCAHPWGPT ENSTTRP00000011902/1-448 PAPGILAFPK LVASVSESGL QAQHGVKFQC RLSAGLPGHS HCCAYPWGPT bmy_16901T0/1-431 PAPGILAFPK LVASVSESGL QAQHGVKFQC RLPVGLPGHS HCCAYPWGPT BACU005450/1-368 PAPGILAFPK LVASVSESGL QAQHGVKFQC RLPVGLPGHS HCCAYPWGPT 301 350 ENSP00000363433/1-458 GLVPEPGSRT KDVWTMTSAN DLAPAEASPL SAQDAGVQAA PVAACKAVAT ENSBTAP00000054217/1-453 GLAMEPSART KDMWTMTSAS DLAPVLASPL SAQDAGVQAA PKAVCKAVAT ENSTTRP00000011902/1-448 GLAMEAGART KDMWTMTSAS DLAPILASPL SAQDAGVQAA PKAVCKAVAT bmy_16901T0/1-431 GLAMEAGART KDMWTMTSAS DLAPILASPL SAQDAGVQAA PKAVCKAVAT BACU005450/1-368 RLAMEAGART KDMWTMTSAS DLAPILASPL SAQDAGVQAA PKAVCKAVAT 351 400 ENSP00000363433/1-458 SPSLEAPAAL HVFPEVTLGS SLEEVPSPVR DVRWDAEGMT WEVYGAAVDL ENSBTAP00000054217/1-453 SPPLEAPVAL RMFPEVTLEP SLAEAPSPVR DVRWDAEGMT WEVYGAAVDP ENSTTRP00000011902/1-448 SPPLEAPVAL HTFSEATLGS SLEEVPPPVR DVRWDAEGMT WEVYGAAVDP bmy_16901T0/1-431 SPPLEAPVAL HTFPEVTLGS SLEEVPSPVR DVRWDAEGMT WEVYGAAVDP BACU005450/1-368 SPPLEAPVAL HTFPEVTLGS SLEEVPSPVR DVRWDAEGMT WEVYGAAVDP 401 450 ENSP00000363433/1-458 EVLGVAIQKH LEMQFEQLQR APASEDSLSV EGRRGPLRAV MQSLRRPSCC ENSBTAP00000054217/1-453 EVLGVAIQKH LEMQFEQLQR APASEDSLSA EGRRGPLRAV MQSLRHPSCC ENSTTRP00000011902/1-448 EVLGLAIQKH LEMQFEQLQR APASENSLSA ESRRGPLRAV MQSLQCPSCC bmy_16901T0/1-431 EVLGLAIQKH LEMQFEQLQR APASENSLSA EGRRGPLQAV MQSLQCPSCC BACU005450/1-368 EVLGLAIQKH LEMQFEQLQR APASENSLSA EGRRGPLQAV MQSLQCPSCC 451 500 ENSP00000363433/1-458 GCSGAAPE ENSBTAP00000054217/1-453 GCSSAAPE ENSTTRP00000011902/1-448 GCSSAVPE bmy_16901T0/1-431 GCSSAAPE BACU005450/1-368 GCSSAAPE